RNA–Protein interactions for RNA: ENST00000461214.1

COL5A3-202, Transcript of collagen type V alpha 3 chain, humanhuman

TSL 3

Gene COL5A3, Length 828 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-202ENST00000461214 ERICH2A1L162 156 aa16.93■□□□□ 0.3
COL5A3-202ENST00000461214 PRC1O43663 620 aa16.93■□□□□ 0.3
COL5A3-202ENST00000461214 NOVP48745 357 aa16.93■□□□□ 0.3
COL5A3-202ENST00000461214 ANTXR2P58335 489 aa16.93■□□□□ 0.3
COL5A3-202ENST00000461214 RABEP1Q15276 862 aa16.93■□□□□ 0.3
COL5A3-202ENST00000461214 FAM47AQ5JRC9 791 aa16.93■□□□□ 0.3
COL5A3-202ENST00000461214 CYB5R4Q7L1T6 521 aa16.93■□□□□ 0.3
COL5A3-202ENST00000461214 FBXL16Q8N461 479 aa16.93■□□□□ 0.3
COL5A3-202ENST00000461214 KIF2CQ99661 725 aa16.93■□□□□ 0.3
COL5A3-202ENST00000461214 MANSC4A6NHS7 340 aaPredicted RBP16.92■□□□□ 0.3
COL5A3-202ENST00000461214 ICA1Q05084 483 aa16.92■□□□□ 0.3
COL5A3-202ENST00000461214 ZKSCAN4Q969J2 545 aaPredicted RBP16.92■□□□□ 0.3
COL5A3-202ENST00000461214 CEP95Q96GE4 821 aa16.92■□□□□ 0.3
COL5A3-202ENST00000461214 TTC14Q96N46 770 aa16.92■□□□□ 0.3
COL5A3-202ENST00000461214 ZSCAN10Q96SZ4 725 aaPredicted RBP16.92■□□□□ 0.3
COL5A3-202ENST00000461214 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.92■□□□□ 0.3
COL5A3-202ENST00000461214 SH2D4AQ9H788 454 aa16.92■□□□□ 0.3
COL5A3-202ENST00000461214 AS3MTQ9HBK9 375 aa16.92■□□□□ 0.3
COL5A3-202ENST00000461214 MTMR4Q9NYA4 1195 aa16.92■□□□□ 0.3
COL5A3-202ENST00000461214 TRIOBPQ9H2D6 2365 aa16.92■□□□□ 0.3
COL5A3-202ENST00000461214 SPDYE5A6NIY4 337 aa16.91■□□□□ 0.3
COL5A3-202ENST00000461214 USP17L5A8MUK1 530 aa16.91■□□□□ 0.3
COL5A3-202ENST00000461214 IGF2BP3O00425 579 aaKnown RBP eCLIP16.91■□□□□ 0.3
COL5A3-202ENST00000461214 TTLL1O95922 423 aa16.91■□□□□ 0.3
COL5A3-202ENST00000461214 PTPRAP18433 802 aa16.91■□□□□ 0.3
COL5A3-202ENST00000461214 GUCY1A2P33402 732 aa16.91■□□□□ 0.3
COL5A3-202ENST00000461214 EXOSC10Q01780 885 aaKnown RBP16.91■□□□□ 0.3
COL5A3-202ENST00000461214 SEPT2Q15019 361 aa16.91■□□□□ 0.3
COL5A3-202ENST00000461214 RAB3GAP1Q15042 981 aa16.91■□□□□ 0.3
COL5A3-202ENST00000461214 DGKHQ86XP1 1220 aa16.91■□□□□ 0.3
COL5A3-202ENST00000461214 ERO1BQ86YB8 467 aa16.91■□□□□ 0.3
COL5A3-202ENST00000461214 SLC10A4Q96EP9 437 aa16.91■□□□□ 0.3
COL5A3-202ENST00000461214 AGXT2Q9BYV1 514 aa16.91■□□□□ 0.3
COL5A3-202ENST00000461214 UPF3BQ9BZI7 483 aaKnown RBP16.91■□□□□ 0.3
COL5A3-202ENST00000461214 ARHGEF10LQ9HCE6 1279 aa16.91■□□□□ 0.3
COL5A3-202ENST00000461214 IL17RBQ9NRM6 502 aa16.91■□□□□ 0.3
COL5A3-202ENST00000461214 NYAP2Q9P242 653 aa16.91■□□□□ 0.3
COL5A3-202ENST00000461214 RBM27Q9P2N5 1060 aaKnown RBP16.91■□□□□ 0.3
COL5A3-202ENST00000461214 LIFRP42702 1097 aa16.9■□□□□ 0.3
COL5A3-202ENST00000461214 JAG1P78504 1218 aa16.9■□□□□ 0.3
COL5A3-202ENST00000461214 SEC23AQ15436 765 aa16.9■□□□□ 0.3
COL5A3-202ENST00000461214 SHROOM1Q2M3G4 852 aaPredicted RBP16.9■□□□□ 0.3
COL5A3-202ENST00000461214 ENAHQ8N8S7 591 aaPredicted RBP16.9■□□□□ 0.3
COL5A3-202ENST00000461214 NKX2-3Q8TAU0 364 aa16.9■□□□□ 0.3
COL5A3-202ENST00000461214 ANKS1AQ92625 1134 aa16.9■□□□□ 0.3
COL5A3-202ENST00000461214 WDR18Q9BV38 432 aa16.9■□□□□ 0.3
COL5A3-202ENST00000461214 ALDH8A1Q9H2A2 487 aaPredicted RBP16.9■□□□□ 0.3
COL5A3-202ENST00000461214 HTTP42858 3142 aa16.9■□□□□ 0.3
COL5A3-202ENST00000461214 SH2B2O14492 632 aaPredicted RBP16.89■□□□□ 0.29
COL5A3-202ENST00000461214 IFIT3O14879 490 aaKnown RBP16.89■□□□□ 0.29
COL5A3-202ENST00000461214 INHBEP58166 350 aa16.89■□□□□ 0.29
COL5A3-202ENST00000461214 PPATQ06203 517 aa16.89■□□□□ 0.29
COL5A3-202ENST00000461214 CRHR2Q13324 411 aa16.89■□□□□ 0.29
COL5A3-202ENST00000461214 WTAPQ15007 396 aa16.89■□□□□ 0.29
COL5A3-202ENST00000461214 SLC9C1Q4G0N8 1177 aa16.89■□□□□ 0.29
COL5A3-202ENST00000461214 TMEM67Q5HYA8 995 aa16.89■□□□□ 0.29
COL5A3-202ENST00000461214 RCSD1Q6JBY9 416 aa16.89■□□□□ 0.29
COL5A3-202ENST00000461214 TMTC2Q8N394 836 aa16.89■□□□□ 0.29
COL5A3-202ENST00000461214 ZNF333Q96JL9 665 aa16.89■□□□□ 0.29
COL5A3-202ENST00000461214 CLMNQ96JQ2 1002 aa16.89■□□□□ 0.29
COL5A3-202ENST00000461214 ZKSCAN3Q9BRR0 538 aa16.89■□□□□ 0.29
COL5A3-202ENST00000461214 ST18O60284 1047 aa16.88■□□□□ 0.29
COL5A3-202ENST00000461214 NMT2O60551 498 aa16.88■□□□□ 0.29
COL5A3-202ENST00000461214 ZBTB48P10074 688 aaPredicted RBP16.88■□□□□ 0.29
COL5A3-202ENST00000461214 TOP1P11387 765 aaKnown RBP16.88■□□□□ 0.29
COL5A3-202ENST00000461214 CPA1P15085 419 aa16.88■□□□□ 0.29
COL5A3-202ENST00000461214 FGD1P98174 961 aa16.88■□□□□ 0.29
COL5A3-202ENST00000461214 CAP1Q01518 475 aa16.88■□□□□ 0.29
COL5A3-202ENST00000461214 SP3Q02447 781 aa16.88■□□□□ 0.29
COL5A3-202ENST00000461214 PPIL2Q13356 520 aa16.88■□□□□ 0.29
COL5A3-202ENST00000461214 COL9A3Q14050 684 aaPredicted RBP16.88■□□□□ 0.29
COL5A3-202ENST00000461214 ANKRD1Q15327 319 aa16.88■□□□□ 0.29
COL5A3-202ENST00000461214 IFIT1BQ5T764 474 aaKnown RBP16.88■□□□□ 0.29
COL5A3-202ENST00000461214 CHST3Q7LGC8 479 aa16.88■□□□□ 0.29
COL5A3-202ENST00000461214 SGMS1Q86VZ5 419 aa16.88■□□□□ 0.29
COL5A3-202ENST00000461214 IGDCC4Q8TDY8 1250 aa16.88■□□□□ 0.29
COL5A3-202ENST00000461214 DPF3Q92784 378 aa16.88■□□□□ 0.29
COL5A3-202ENST00000461214 MKL1Q969V6 931 aa16.88■□□□□ 0.29
COL5A3-202ENST00000461214 ELP3Q9H9T3 547 aa16.88■□□□□ 0.29
COL5A3-202ENST00000461214 LY9Q9HBG7 655 aa16.88■□□□□ 0.29
COL5A3-202ENST00000461214 PDRG1Q9NUG6 133 aa16.88■□□□□ 0.29
COL5A3-202ENST00000461214 STX8Q9UNK0 236 aa16.88■□□□□ 0.29
COL5A3-202ENST00000461214 NID2Q14112 1375 aa16.88■□□□□ 0.29
COL5A3-202ENST00000461214 EEF2P13639 858 aaKnown RBP16.87■□□□□ 0.29
COL5A3-202ENST00000461214 NEK4P51957 841 aa16.87■□□□□ 0.29
COL5A3-202ENST00000461214 RCAN1P53805 252 aa16.87■□□□□ 0.29
COL5A3-202ENST00000461214 NBPF11Q86T75 865 aa16.87■□□□□ 0.29
COL5A3-202ENST00000461214 CLEC10AQ8IUN9 316 aa16.87■□□□□ 0.29
COL5A3-202ENST00000461214 ZNF280CQ8ND82 737 aa16.87■□□□□ 0.29
COL5A3-202ENST00000461214 OPTNQ96CV9 577 aa16.87■□□□□ 0.29
COL5A3-202ENST00000461214 WNK4Q96J92 1243 aa16.87■□□□□ 0.29
COL5A3-202ENST00000461214 KIAA1683Q9H0B3 1180 aa16.87■□□□□ 0.29
COL5A3-202ENST00000461214 TMX2Q9Y320 296 aa16.87■□□□□ 0.29
COL5A3-202ENST00000461214 PTCH2Q9Y6C5 1203 aa16.87■□□□□ 0.29
COL5A3-202ENST00000461214 CENPFP49454 3210 aa16.86■□□□□ 0.29
COL5A3-202ENST00000461214 C19orf81C9J6K1 198 aa16.86■□□□□ 0.29
COL5A3-202ENST00000461214 USP14P54578 494 aa16.86■□□□□ 0.29
COL5A3-202ENST00000461214 Q6ZUG5 572 aa16.86■□□□□ 0.29
COL5A3-202ENST00000461214 GMCL1P1Q8NEA9 526 aa16.86■□□□□ 0.29
COL5A3-202ENST00000461214 TCEANC2Q96MN5 208 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms