RNA–Protein interactions for RNA: ENST00000460770.1

SYPL1-203, Transcript of synaptophysin like 1, humanhuman

TSL 1 (best)

Gene SYPL1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-203ENST00000460770 ANKS4BQ8N8V4 417 aa4.89□□□□□ -1.63
SYPL1-203ENST00000460770 ENOX1Q8TC92 643 aaKnown RBP4.89□□□□□ -1.63
SYPL1-203ENST00000460770 USP31Q70CQ4 1352 aa4.89□□□□□ -1.63
SYPL1-203ENST00000460770 SEMA7AO75326 666 aa4.88□□□□□ -1.63
SYPL1-203ENST00000460770 GBP1P32455 592 aa4.88□□□□□ -1.63
SYPL1-203ENST00000460770 GBP2P32456 591 aaPredicted RBP4.88□□□□□ -1.63
SYPL1-203ENST00000460770 BNC2Q6ZN30 1099 aaPredicted RBP4.88□□□□□ -1.63
SYPL1-203ENST00000460770 CILP2Q8IUL8 1156 aa4.88□□□□□ -1.63
SYPL1-203ENST00000460770 PHACTR4Q8IZ21 702 aa4.88□□□□□ -1.63
SYPL1-203ENST00000460770 PPP1R13LQ8WUF5 828 aa4.88□□□□□ -1.63
SYPL1-203ENST00000460770 KREMEN1Q96MU8 473 aa4.88□□□□□ -1.63
SYPL1-203ENST00000460770 TMEM74Q96NL1 305 aa4.88□□□□□ -1.63
SYPL1-203ENST00000460770 RSRP1Q9BUV0 290 aa4.88□□□□□ -1.63
SYPL1-203ENST00000460770 CD320Q9NPF0 282 aa4.88□□□□□ -1.63
SYPL1-203ENST00000460770 VTI1BQ9UEU0 232 aa4.88□□□□□ -1.63
SYPL1-203ENST00000460770 PRR36Q9H6K5 1346 aa4.88□□□□□ -1.63
SYPL1-203ENST00000460770 FAM221AA4D161 298 aa4.87□□□□□ -1.63
SYPL1-203ENST00000460770 ETV2O00321 342 aaPredicted RBP4.87□□□□□ -1.63
SYPL1-203ENST00000460770 NUAK1O60285 661 aa4.87□□□□□ -1.63
SYPL1-203ENST00000460770 PEX10O60683 326 aa4.87□□□□□ -1.63
SYPL1-203ENST00000460770 PF4P02776 101 aa4.87□□□□□ -1.63
SYPL1-203ENST00000460770 ZGLP1P0C6A0 271 aa4.87□□□□□ -1.63
SYPL1-203ENST00000460770 RAD51AP2Q09MP3 1159 aa4.87□□□□□ -1.63
SYPL1-203ENST00000460770 MPP2Q14168 576 aa4.87□□□□□ -1.63
SYPL1-203ENST00000460770 CWF19L2Q2TBE0 894 aaKnown RBP4.87□□□□□ -1.63
SYPL1-203ENST00000460770 TMEM132EQ6IEE7 984 aa4.87□□□□□ -1.63
SYPL1-203ENST00000460770 RNF32Q9H0A6 362 aa4.87□□□□□ -1.63
SYPL1-203ENST00000460770 REV1Q9UBZ9 1251 aa4.87□□□□□ -1.63
SYPL1-203ENST00000460770 KLHL3Q9UH77 587 aa4.87□□□□□ -1.63
SYPL1-203ENST00000460770 SMG5Q9UPR3 1016 aaKnown RBP4.87□□□□□ -1.63
SYPL1-203ENST00000460770 PCDHA11Q9Y5I1 949 aa4.87□□□□□ -1.63
SYPL1-203ENST00000460770 CORINQ9Y5Q5 1042 aa4.87□□□□□ -1.63
SYPL1-203ENST00000460770 SSU72P8A0A1W2PR75 194 aa4.86□□□□□ -1.63
SYPL1-203ENST00000460770 RBM47A0AV96 593 aaKnown RBP4.86□□□□□ -1.63
SYPL1-203ENST00000460770 UPK3BL1B0FP48 263 aa4.86□□□□□ -1.63
SYPL1-203ENST00000460770 UPK3BL2E5RIL1 263 aa4.86□□□□□ -1.63
SYPL1-203ENST00000460770 RFXAPO00287 272 aa4.86□□□□□ -1.63
SYPL1-203ENST00000460770 HTR3BO95264 441 aa4.86□□□□□ -1.63
SYPL1-203ENST00000460770 F13A1P00488 732 aa4.86□□□□□ -1.63
SYPL1-203ENST00000460770 PDIA4P13667 645 aaKnown RBP4.86□□□□□ -1.63
SYPL1-203ENST00000460770 ENDOUP21128 410 aaKnown RBP4.86□□□□□ -1.63
SYPL1-203ENST00000460770 PDE6BP35913 854 aa4.86□□□□□ -1.63
SYPL1-203ENST00000460770 LINC00310P59036 64 aa4.86□□□□□ -1.63
SYPL1-203ENST00000460770 ERVFC1P60507 584 aa4.86□□□□□ -1.63
SYPL1-203ENST00000460770 OLFML2BQ68BL8 750 aa4.86□□□□□ -1.63
SYPL1-203ENST00000460770 RNF111Q6ZNA4 994 aa4.86□□□□□ -1.63
SYPL1-203ENST00000460770 C1QL4Q86Z23 238 aa4.86□□□□□ -1.63
SYPL1-203ENST00000460770 AEBP1Q8IUX7 1158 aa4.86□□□□□ -1.63
SYPL1-203ENST00000460770 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.86□□□□□ -1.63
SYPL1-203ENST00000460770 GPR160Q9UJ42 338 aa4.86□□□□□ -1.63
SYPL1-203ENST00000460770 YBX2Q9Y2T7 364 aaKnown RBP4.86□□□□□ -1.63
SYPL1-203ENST00000460770 ROBO2Q9HCK4 1378 aa4.86□□□□□ -1.63
SYPL1-203ENST00000460770 LILRA6Q6PI73 481 aa4.85□□□□□ -1.63
SYPL1-203ENST00000460770 LCNL1Q6ZST4 164 aa4.85□□□□□ -1.63
SYPL1-203ENST00000460770 TMEM151BQ8IW70 566 aa4.85□□□□□ -1.63
SYPL1-203ENST00000460770 GOLM1Q8NBJ4 401 aa4.85□□□□□ -1.63
SYPL1-203ENST00000460770 SYTL5Q8TDW5 730 aaPredicted RBP4.85□□□□□ -1.63
SYPL1-203ENST00000460770 INTS4Q96HW7 963 aaKnown RBP4.85□□□□□ -1.63
SYPL1-203ENST00000460770 RHOVQ96L33 236 aa4.85□□□□□ -1.63
SYPL1-203ENST00000460770 KRTAP4-2Q9BYR5 136 aa4.85□□□□□ -1.63
SYPL1-203ENST00000460770 C19orf44Q9H6X5 657 aa4.85□□□□□ -1.63
SYPL1-203ENST00000460770 TEX51A0A1B0GUA7 166 aa4.84□□□□□ -1.63
SYPL1-203ENST00000460770 WASH4PA8MWX3 477 aa4.84□□□□□ -1.63
SYPL1-203ENST00000460770 RGS13O14921 159 aa4.84□□□□□ -1.63
SYPL1-203ENST00000460770 KRT1P04264 644 aa4.84□□□□□ -1.63
SYPL1-203ENST00000460770 RAG1P15918 1043 aa4.84□□□□□ -1.63
SYPL1-203ENST00000460770 TRHRP34981 398 aaPredicted RBP4.84□□□□□ -1.63
SYPL1-203ENST00000460770 PCBP3P57721 371 aaKnown RBP4.84□□□□□ -1.63
SYPL1-203ENST00000460770 NMIQ13287 307 aaPredicted RBP4.84□□□□□ -1.63
SYPL1-203ENST00000460770 SLC14A2Q15849 920 aa4.84□□□□□ -1.63
SYPL1-203ENST00000460770 FAM196AQ6ZSG2 479 aa4.84□□□□□ -1.63
SYPL1-203ENST00000460770 REC114Q7Z4M0 266 aa4.84□□□□□ -1.63
SYPL1-203ENST00000460770 ZNF605Q86T29 641 aa4.84□□□□□ -1.63
SYPL1-203ENST00000460770 ZNF655Q8N720 491 aaPredicted RBP4.84□□□□□ -1.63
SYPL1-203ENST00000460770 BAHD1Q8TBE0 780 aaPredicted RBP4.84□□□□□ -1.63
SYPL1-203ENST00000460770 RNF19AQ9NV58 838 aa4.84□□□□□ -1.63
SYPL1-203ENST00000460770 ZMYM5Q9UJ78 669 aa4.84□□□□□ -1.63
SYPL1-203ENST00000460770 OR14I1A6ND48 311 aa4.83□□□□□ -1.64
SYPL1-203ENST00000460770 CHURC1-FNTBB4DL54 471 aa4.83□□□□□ -1.64
SYPL1-203ENST00000460770 HRKO00198 91 aa4.83□□□□□ -1.64
SYPL1-203ENST00000460770 GRIN3BO60391 1043 aa4.83□□□□□ -1.64
SYPL1-203ENST00000460770 CTSHP09668 335 aa4.83□□□□□ -1.64
SYPL1-203ENST00000460770 KIR2DL1P43626 348 aaPredicted RBP4.83□□□□□ -1.64
SYPL1-203ENST00000460770 KIR2DL2P43627 348 aaPredicted RBP4.83□□□□□ -1.64
SYPL1-203ENST00000460770 DLG4P78352 724 aa4.83□□□□□ -1.64
SYPL1-203ENST00000460770 TEKQ02763 1124 aa4.83□□□□□ -1.64
SYPL1-203ENST00000460770 FAM160A1Q05DH4 1040 aa4.83□□□□□ -1.64
SYPL1-203ENST00000460770 ZNF385BQ569K4 471 aa4.83□□□□□ -1.64
SYPL1-203ENST00000460770 TTLL10Q6ZVT0 673 aa4.83□□□□□ -1.64
SYPL1-203ENST00000460770 DAGLBQ8NCG7 672 aa4.83□□□□□ -1.64
SYPL1-203ENST00000460770 FAM161BQ96MY7 647 aa4.83□□□□□ -1.64
SYPL1-203ENST00000460770 KIF2CQ99661 725 aa4.83□□□□□ -1.64
SYPL1-203ENST00000460770 ZNF552Q9H707 407 aaPredicted RBP4.83□□□□□ -1.64
SYPL1-203ENST00000460770 GMIPQ9P107 970 aa4.83□□□□□ -1.64
SYPL1-203ENST00000460770 CNOT6Q9ULM6 557 aaKnown RBP4.83□□□□□ -1.64
SYPL1-203ENST00000460770 SUPT16HQ9Y5B9 1047 aaKnown RBP4.83□□□□□ -1.64
SYPL1-203ENST00000460770 MINDY4BA8MYZ0 360 aa4.82□□□□□ -1.64
SYPL1-203ENST00000460770 LRRN2O75325 713 aa4.82□□□□□ -1.64
SYPL1-203ENST00000460770 RPL10P27635 214 aaKnown RBP4.82□□□□□ -1.64
SYPL1-203ENST00000460770 CCNFP41002 786 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms