RNA–Protein interactions for RNA: ENST00000459788.1

HDLBP-228, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-228ENST00000459788 HOXC6P09630 235 aa11.98□□□□□ -0.49
HDLBP-228ENST00000459788 CYP2D6P10635 497 aa11.98□□□□□ -0.49
HDLBP-228ENST00000459788 ELNP15502 786 aa11.98□□□□□ -0.49
HDLBP-228ENST00000459788 ICA1Q05084 483 aa11.98□□□□□ -0.49
HDLBP-228ENST00000459788 MAP3K21Q5TCX8 1036 aa11.98□□□□□ -0.49
HDLBP-228ENST00000459788 GPR142Q7Z601 462 aa11.98□□□□□ -0.49
HDLBP-228ENST00000459788 OSBP2Q969R2 916 aa11.98□□□□□ -0.49
HDLBP-228ENST00000459788 NACAP1Q9BZK3 213 aa11.98□□□□□ -0.49
HDLBP-228ENST00000459788 UNC93B1Q9H1C4 597 aa11.98□□□□□ -0.49
HDLBP-228ENST00000459788 RPAP3Q9H6T3 665 aaPredicted RBP11.98□□□□□ -0.49
HDLBP-228ENST00000459788 VCPKMTQ9H867 229 aa11.98□□□□□ -0.49
HDLBP-228ENST00000459788 HMX1Q9NP08 348 aaPredicted RBP11.98□□□□□ -0.49
HDLBP-228ENST00000459788 A0A1W2PRG0 241 aa11.97□□□□□ -0.49
HDLBP-228ENST00000459788 PATL2C9JE40 543 aaKnown RBP11.97□□□□□ -0.49
HDLBP-228ENST00000459788 CNMDO75829 334 aa11.97□□□□□ -0.49
HDLBP-228ENST00000459788 AKR1B1P15121 316 aa11.97□□□□□ -0.49
HDLBP-228ENST00000459788 MAP2K5Q13163 448 aa11.97□□□□□ -0.49
HDLBP-228ENST00000459788 Q3C1V9 767 aa11.97□□□□□ -0.49
HDLBP-228ENST00000459788 PPP4R3BQ5MIZ7 849 aa11.97□□□□□ -0.49
HDLBP-228ENST00000459788 SIAH1Q8IUQ4 282 aa11.97□□□□□ -0.49
HDLBP-228ENST00000459788 DYNLL2Q96FJ2 89 aa11.97□□□□□ -0.49
HDLBP-228ENST00000459788 CRBNQ96SW2 442 aa11.97□□□□□ -0.49
HDLBP-228ENST00000459788 APBA2Q99767 749 aa11.97□□□□□ -0.49
HDLBP-228ENST00000459788 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.97□□□□□ -0.49
HDLBP-228ENST00000459788 BCL11AQ9H165 835 aa11.97□□□□□ -0.49
HDLBP-228ENST00000459788 GOPCQ9HD26 462 aa11.97□□□□□ -0.49
HDLBP-228ENST00000459788 PLXNA1Q9UIW2 1896 aa11.97□□□□□ -0.49
HDLBP-228ENST00000459788 ALPK3Q96L96 1907 aa11.96□□□□□ -0.49
HDLBP-228ENST00000459788 ECM2O94769 699 aaPredicted RBP11.96□□□□□ -0.49
HDLBP-228ENST00000459788 FARP2O94887 1054 aaPredicted RBP11.96□□□□□ -0.49
HDLBP-228ENST00000459788 SLC34A2O95436 690 aa11.96□□□□□ -0.49
HDLBP-228ENST00000459788 SLC3A2P08195 630 aaKnown RBP11.96□□□□□ -0.49
HDLBP-228ENST00000459788 PTPREP23469 700 aa11.96□□□□□ -0.49
HDLBP-228ENST00000459788 DSG3P32926 999 aa11.96□□□□□ -0.49
HDLBP-228ENST00000459788 COPB2P35606 906 aa11.96□□□□□ -0.49
HDLBP-228ENST00000459788 ZYXQ15942 572 aaKnown RBP11.96□□□□□ -0.49
HDLBP-228ENST00000459788 SLFNL1Q499Z3 407 aa11.96□□□□□ -0.49
HDLBP-228ENST00000459788 ZMYM1Q5SVZ6 1142 aa11.96□□□□□ -0.49
HDLBP-228ENST00000459788 POTEEQ6S8J3 1075 aa11.96□□□□□ -0.49
HDLBP-228ENST00000459788 ABRAQ8N0Z2 381 aa11.96□□□□□ -0.49
HDLBP-228ENST00000459788 SLC44A5Q8NCS7 719 aa11.96□□□□□ -0.49
HDLBP-228ENST00000459788 EVI5LQ96CN4 794 aa11.96□□□□□ -0.49
HDLBP-228ENST00000459788 PAGR1Q9BTK6 254 aa11.96□□□□□ -0.49
HDLBP-228ENST00000459788 PORCNQ9H237 461 aa11.96□□□□□ -0.49
HDLBP-228ENST00000459788 RWDD1Q9H446 243 aaPredicted RBP11.96□□□□□ -0.49
HDLBP-228ENST00000459788 MROH8Q9H579 483 aa11.96□□□□□ -0.49
HDLBP-228ENST00000459788 CWC22Q9HCG8 908 aaKnown RBP11.96□□□□□ -0.49
HDLBP-228ENST00000459788 NYAP2Q9P242 653 aa11.96□□□□□ -0.49
HDLBP-228ENST00000459788 ADAMTS5Q9UNA0 930 aa11.96□□□□□ -0.49
HDLBP-228ENST00000459788 IVNS1ABPQ9Y6Y0 642 aa11.96□□□□□ -0.49
HDLBP-228ENST00000459788 PLIN4Q96Q06 1357 aa11.95□□□□□ -0.5
HDLBP-228ENST00000459788 SLC25A27O95847 323 aa11.95□□□□□ -0.5
HDLBP-228ENST00000459788 ZKSCAN1P17029 563 aaPredicted RBP11.95□□□□□ -0.5
HDLBP-228ENST00000459788 RASA1P20936 1047 aa11.95□□□□□ -0.5
HDLBP-228ENST00000459788 TDO2P48775 406 aa11.95□□□□□ -0.5
HDLBP-228ENST00000459788 EVX2Q03828 476 aa11.95□□□□□ -0.5
HDLBP-228ENST00000459788 GRB14Q14449 540 aa11.95□□□□□ -0.5
HDLBP-228ENST00000459788 ANKRD45Q5TZF3 282 aa11.95□□□□□ -0.5
HDLBP-228ENST00000459788 SMC5Q8IY18 1101 aa11.95□□□□□ -0.5
HDLBP-228ENST00000459788 IFNL3Q8IZI9 196 aa11.95□□□□□ -0.5
HDLBP-228ENST00000459788 TRIB2Q92519 343 aa11.95□□□□□ -0.5
HDLBP-228ENST00000459788 MKL1Q969V6 931 aa11.95□□□□□ -0.5
HDLBP-228ENST00000459788 DEFB118Q96PH6 123 aa11.95□□□□□ -0.5
HDLBP-228ENST00000459788 FSD1Q9BTV5 496 aa11.95□□□□□ -0.5
HDLBP-228ENST00000459788 TANGO6Q9C0B7 1094 aa11.95□□□□□ -0.5
HDLBP-228ENST00000459788 MKNK2Q9HBH9 465 aa11.95□□□□□ -0.5
HDLBP-228ENST00000459788 SLC5A4Q9NY91 659 aa11.95□□□□□ -0.5
HDLBP-228ENST00000459788 BTBD7Q9P203 1132 aa11.95□□□□□ -0.5
HDLBP-228ENST00000459788 CYP2D7A0A087X1C5 515 aa11.94□□□□□ -0.5
HDLBP-228ENST00000459788 MSCO60682 206 aa11.94□□□□□ -0.5
HDLBP-228ENST00000459788 MYCP01106 439 aaPredicted RBP11.94□□□□□ -0.5
HDLBP-228ENST00000459788 TFRCP02786 760 aaKnown RBP11.94□□□□□ -0.5
HDLBP-228ENST00000459788 CHGBP05060 677 aa11.94□□□□□ -0.5
HDLBP-228ENST00000459788 EEF2P13639 858 aaKnown RBP11.94□□□□□ -0.5
HDLBP-228ENST00000459788 CYP2B6P20813 491 aa11.94□□□□□ -0.5
HDLBP-228ENST00000459788 PDE1AP54750 535 aa11.94□□□□□ -0.5
HDLBP-228ENST00000459788 PDE4BQ07343 736 aa11.94□□□□□ -0.5
HDLBP-228ENST00000459788 TSHZ3Q63HK5 1081 aa11.94□□□□□ -0.5
HDLBP-228ENST00000459788 SPATC1LQ9H0A9 340 aa11.94□□□□□ -0.5
HDLBP-228ENST00000459788 HELLSQ9NRZ9 838 aa11.94□□□□□ -0.5
HDLBP-228ENST00000459788 OGDHLQ9ULD0 1010 aa11.94□□□□□ -0.5
HDLBP-228ENST00000459788 NR2E3Q9Y5X4 410 aa11.94□□□□□ -0.5
HDLBP-228ENST00000459788 TRIOBPQ9H2D6 2365 aa11.94□□□□□ -0.5
HDLBP-228ENST00000459788 ZMYM6O95789 1325 aa11.93□□□□□ -0.5
HDLBP-228ENST00000459788 IGKV6D-41A0A0C4DH26 115 aa11.93□□□□□ -0.5
HDLBP-228ENST00000459788 M0R2C6 588 aa11.93□□□□□ -0.5
HDLBP-228ENST00000459788 FLOT1O75955 427 aa11.93□□□□□ -0.5
HDLBP-228ENST00000459788 IGHA2P01877 340 aa11.93□□□□□ -0.5
HDLBP-228ENST00000459788 FDX1P10109 184 aa11.93□□□□□ -0.5
HDLBP-228ENST00000459788 PRKAR2AP13861 404 aaKnown RBP11.93□□□□□ -0.5
HDLBP-228ENST00000459788 NT5C2P49902 561 aa11.93□□□□□ -0.5
HDLBP-228ENST00000459788 ALX1Q15699 326 aa11.93□□□□□ -0.5
HDLBP-228ENST00000459788 MFSD14CQ5VZR4 134 aa11.93□□□□□ -0.5
HDLBP-228ENST00000459788 OLFML2BQ68BL8 750 aa11.93□□□□□ -0.5
HDLBP-228ENST00000459788 NECAB2Q7Z6G3 386 aa11.93□□□□□ -0.5
HDLBP-228ENST00000459788 ZNF444Q8N0Y2 327 aaPredicted RBP11.93□□□□□ -0.5
HDLBP-228ENST00000459788 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.93□□□□□ -0.5
HDLBP-228ENST00000459788 MOV10L1Q9BXT6 1211 aaKnown RBP11.93□□□□□ -0.5
HDLBP-228ENST00000459788 OSBPL3Q9H4L5 887 aa11.93□□□□□ -0.5
HDLBP-228ENST00000459788 EPB41L4AQ9HCS5 686 aaPredicted RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms