RNA–Protein interactions for RNA: ENST00000458362.5

CRAT-207, Transcript of carnitine O-acetyltransferase, humanhuman

TSL 1 (best)

Gene CRAT, Length 2,253 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-207ENST00000458362 URI1O94763 535 aaPredicted RBP23.52■■□□□ 1.36
CRAT-207ENST00000458362 PCP11498 1178 aaKnown RBP23.52■■□□□ 1.36
CRAT-207ENST00000458362 TBC1D9BQ66K14 1250 aa23.52■■□□□ 1.36
CRAT-207ENST00000458362 SMARCC1Q92922 1105 aaPredicted RBP23.52■■□□□ 1.36
CRAT-207ENST00000458362 DCP1AQ9NPI6 582 aaPredicted RBP23.52■■□□□ 1.36
CRAT-207ENST00000458362 TFCP2L1Q9NZI6 479 aa23.52■■□□□ 1.36
CRAT-207ENST00000458362 SPATA31A5Q5VU36 1347 aa23.51■■□□□ 1.35
CRAT-207ENST00000458362 SPATA31A7Q8IWB4 1347 aa23.51■■□□□ 1.35
CRAT-207ENST00000458362 PTGDRQ13258 359 aa23.51■■□□□ 1.35
CRAT-207ENST00000458362 SPATA1Q5VX52 437 aa23.51■■□□□ 1.35
CRAT-207ENST00000458362 WDR24Q96S15 920 aa23.51■■□□□ 1.35
CRAT-207ENST00000458362 SYNRGQ9UMZ2 1314 aa23.51■■□□□ 1.35
CRAT-207ENST00000458362 IGSF3O75054 1194 aa23.5■■□□□ 1.35
CRAT-207ENST00000458362 ATP2C1P98194 919 aaPredicted RBP23.5■■□□□ 1.35
CRAT-207ENST00000458362 STAMQ92783 540 aa23.5■■□□□ 1.35
CRAT-207ENST00000458362 BRMS1Q9HCU9 246 aa23.5■■□□□ 1.35
CRAT-207ENST00000458362 KIAA1551Q9HCM1 1747 aa23.5■■□□□ 1.35
CRAT-207ENST00000458362 PPP1R3GB7ZBB8 358 aa23.5■■□□□ 1.35
CRAT-207ENST00000458362 BMP15O95972 392 aa23.5■■□□□ 1.35
CRAT-207ENST00000458362 ZNF831Q5JPB2 1677 aa23.5■■□□□ 1.35
CRAT-207ENST00000458362 PRDX5P30044 214 aa23.49■■□□□ 1.35
CRAT-207ENST00000458362 MTF1Q14872 753 aa23.49■■□□□ 1.35
CRAT-207ENST00000458362 ARHGAP29Q52LW3 1261 aa23.49■■□□□ 1.35
CRAT-207ENST00000458362 SLC10A5Q5PT55 438 aa23.49■■□□□ 1.35
CRAT-207ENST00000458362 BARGINQ6ZT62 677 aa23.49■■□□□ 1.35
CRAT-207ENST00000458362 CTCFLQ8NI51 663 aaPredicted RBP23.49■■□□□ 1.35
CRAT-207ENST00000458362 DESI2Q9BSY9 194 aa23.49■■□□□ 1.35
CRAT-207ENST00000458362 ZHX1Q9UKY1 873 aaPredicted RBP23.49■■□□□ 1.35
CRAT-207ENST00000458362 SEMA3EO15041 775 aa23.49■■□□□ 1.35
CRAT-207ENST00000458362 GTF2E1P29083 439 aaPredicted RBP23.49■■□□□ 1.35
CRAT-207ENST00000458362 IL17AQ16552 155 aa23.49■■□□□ 1.35
CRAT-207ENST00000458362 CDKAL1Q5VV42 579 aa23.49■■□□□ 1.35
CRAT-207ENST00000458362 CARD6Q9BX69 1037 aa23.49■■□□□ 1.35
CRAT-207ENST00000458362 XDHP47989 1333 aa23.49■■□□□ 1.35
CRAT-207ENST00000458362 PIK3AP1Q6ZUJ8 805 aa23.48■■□□□ 1.35
CRAT-207ENST00000458362 GSDMAQ96QA5 445 aa23.48■■□□□ 1.35
CRAT-207ENST00000458362 CRNKL1Q9BZJ0 848 aaKnown RBP23.48■■□□□ 1.35
CRAT-207ENST00000458362 RGL2O15211 777 aa23.48■■□□□ 1.35
CRAT-207ENST00000458362 COBLO75128 1261 aa23.48■■□□□ 1.35
CRAT-207ENST00000458362 TADA3O75528 432 aa23.48■■□□□ 1.35
CRAT-207ENST00000458362 SCG2P13521 617 aa23.48■■□□□ 1.35
CRAT-207ENST00000458362 GNG11P61952 73 aa23.48■■□□□ 1.35
CRAT-207ENST00000458362 RPS8P62241 208 aaKnown RBP23.48■■□□□ 1.35
CRAT-207ENST00000458362 E2F4Q16254 413 aa23.48■■□□□ 1.35
CRAT-207ENST00000458362 CT47A1Q5JQC4 288 aaPredicted RBP23.48■■□□□ 1.35
CRAT-207ENST00000458362 KRT222Q8N1A0 295 aa23.48■■□□□ 1.35
CRAT-207ENST00000458362 CCDC34Q96HJ3 373 aa23.48■■□□□ 1.35
CRAT-207ENST00000458362 JAG2Q9Y219 1238 aa23.48■■□□□ 1.35
CRAT-207ENST00000458362 PBX1P40424 430 aa23.47■■□□□ 1.35
CRAT-207ENST00000458362 CLCN6P51797 869 aa23.47■■□□□ 1.35
CRAT-207ENST00000458362 CCDC24Q8N4L8 307 aa23.47■■□□□ 1.35
CRAT-207ENST00000458362 ADD3Q9UEY8 706 aaKnown RBP23.47■■□□□ 1.35
CRAT-207ENST00000458362 AKR1B15C9JRZ8 316 aaPredicted RBP23.47■■□□□ 1.35
CRAT-207ENST00000458362 HIBADHP31937 336 aaKnown RBP23.47■■□□□ 1.35
CRAT-207ENST00000458362 NLRP5P59047 1200 aa23.47■■□□□ 1.35
CRAT-207ENST00000458362 SLC4A8Q2Y0W8 1093 aa23.47■■□□□ 1.35
CRAT-207ENST00000458362 RCSD1Q6JBY9 416 aa23.47■■□□□ 1.35
CRAT-207ENST00000458362 BLZF1Q9H2G9 400 aa23.47■■□□□ 1.35
CRAT-207ENST00000458362 RBL2Q08999 1139 aa23.46■■□□□ 1.35
CRAT-207ENST00000458362 MNS1Q8NEH6 495 aa23.46■■□□□ 1.35
CRAT-207ENST00000458362 MRPL44Q9H9J2 332 aaKnown RBP23.46■■□□□ 1.35
CRAT-207ENST00000458362 MAST2Q6P0Q8 1798 aa23.46■■□□□ 1.35
CRAT-207ENST00000458362 SOWAHDA6NJG2 315 aa23.45■■□□□ 1.35
CRAT-207ENST00000458362 CASQ1P31415 396 aa23.45■■□□□ 1.35
CRAT-207ENST00000458362 MCM7P33993 719 aa23.45■■□□□ 1.35
CRAT-207ENST00000458362 PFKFB3Q16875 520 aaPredicted RBP23.45■■□□□ 1.35
CRAT-207ENST00000458362 PDXDC2PQ6P474 469 aa23.45■■□□□ 1.35
CRAT-207ENST00000458362 TXNRD3Q86VQ6 643 aa23.45■■□□□ 1.35
CRAT-207ENST00000458362 KIFC2Q96AC6 838 aa23.45■■□□□ 1.35
CRAT-207ENST00000458362 PANX2Q96RD6 677 aa23.45■■□□□ 1.35
CRAT-207ENST00000458362 MTRQ99707 1265 aa23.45■■□□□ 1.35
CRAT-207ENST00000458362 SRRTQ9BXP5 876 aaKnown RBP23.45■■□□□ 1.35
CRAT-207ENST00000458362 ATP8A2Q9NTI2 1148 aa23.45■■□□□ 1.35
CRAT-207ENST00000458362 SRP68Q9UHB9 627 aaKnown RBP23.45■■□□□ 1.35
CRAT-207ENST00000458362 CTNND2Q9UQB3 1225 aa23.45■■□□□ 1.35
CRAT-207ENST00000458362 GOLGA6L9A6NEM1 432 aa23.45■■□□□ 1.34
CRAT-207ENST00000458362 KARSQ15046 597 aaKnown RBP23.45■■□□□ 1.34
CRAT-207ENST00000458362 IGSF22Q8N9C0 903 aa23.45■■□□□ 1.34
CRAT-207ENST00000458362 UBXN4Q92575 508 aa23.45■■□□□ 1.34
CRAT-207ENST00000458362 PDS5AQ29RF7 1337 aaKnown RBP23.45■■□□□ 1.34
CRAT-207ENST00000458362 CCDC88AQ3V6T2 1871 aa23.45■■□□□ 1.34
CRAT-207ENST00000458362 NUTM2BA6NNL0 878 aaPredicted RBP23.44■■□□□ 1.34
CRAT-207ENST00000458362 NUTM2EB1AL46 878 aaPredicted RBP23.44■■□□□ 1.34
CRAT-207ENST00000458362 SBK1Q52WX2 424 aa23.44■■□□□ 1.34
CRAT-207ENST00000458362 CPLX3Q8WVH0 158 aa23.44■■□□□ 1.34
CRAT-207ENST00000458362 MAP3K9P80192 1104 aa23.44■■□□□ 1.34
CRAT-207ENST00000458362 RAD9BQ6WBX8 426 aa23.44■■□□□ 1.34
CRAT-207ENST00000458362 ARPP21Q9UBL0 812 aaPredicted RBP23.44■■□□□ 1.34
CRAT-207ENST00000458362 TSPY2A6NKD2 308 aa23.43■■□□□ 1.34
CRAT-207ENST00000458362 USP17L8P0C7I0 530 aa23.43■■□□□ 1.34
CRAT-207ENST00000458362 GABPB1Q06547 395 aaPredicted RBP23.43■■□□□ 1.34
CRAT-207ENST00000458362 PTF1AQ7RTS3 328 aa23.43■■□□□ 1.34
CRAT-207ENST00000458362 IQUBQ8NA54 791 aa23.43■■□□□ 1.34
CRAT-207ENST00000458362 FAM205AQ6ZU69 1335 aa23.42■■□□□ 1.34
CRAT-207ENST00000458362 A0A0U1RQJ8 604 aa23.42■■□□□ 1.34
CRAT-207ENST00000458362 SLC51AQ86UW1 340 aa23.42■■□□□ 1.34
CRAT-207ENST00000458362 PPFIBP1Q86W92 1011 aa23.42■■□□□ 1.34
CRAT-207ENST00000458362 ATRIPQ8WXE1 791 aa23.42■■□□□ 1.34
CRAT-207ENST00000458362 ST7Q9NRC1 585 aa23.42■■□□□ 1.34
CRAT-207ENST00000458362 FHOD1Q9Y613 1164 aa23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms