RNA–Protein interactions for RNA: ENST00000458034.1

RFX3-211, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-211ENST00000458034 V9GY48 417 aaPredicted RBP12.45□□□□□ -0.42
RFX3-211ENST00000458034 SYNRGQ9UMZ2 1314 aa12.44□□□□□ -0.42
RFX3-211ENST00000458034 USP17L12C9JPN9 530 aa12.44□□□□□ -0.42
RFX3-211ENST00000458034 USP17L21D6R901 530 aa12.44□□□□□ -0.42
RFX3-211ENST00000458034 FOXN1O15353 648 aa12.44□□□□□ -0.42
RFX3-211ENST00000458034 STX10O60499 249 aa12.44□□□□□ -0.42
RFX3-211ENST00000458034 PLEKHA8P1O95397 391 aa12.44□□□□□ -0.42
RFX3-211ENST00000458034 TPM1P09493 284 aa12.44□□□□□ -0.42
RFX3-211ENST00000458034 SCG2P13521 617 aa12.44□□□□□ -0.42
RFX3-211ENST00000458034 TXLNAP40222 546 aa12.44□□□□□ -0.42
RFX3-211ENST00000458034 NLRP5P59047 1200 aa12.44□□□□□ -0.42
RFX3-211ENST00000458034 GSTO1P78417 241 aa12.44□□□□□ -0.42
RFX3-211ENST00000458034 ATP2C1P98194 919 aaPredicted RBP12.44□□□□□ -0.42
RFX3-211ENST00000458034 MECOMQ03112 1051 aa12.44□□□□□ -0.42
RFX3-211ENST00000458034 GRIN1Q05586 938 aa12.44□□□□□ -0.42
RFX3-211ENST00000458034 TROAPQ12815 778 aa12.44□□□□□ -0.42
RFX3-211ENST00000458034 SPATA1Q5VX52 437 aa12.44□□□□□ -0.42
RFX3-211ENST00000458034 SYT10Q6XYQ8 523 aa12.44□□□□□ -0.42
RFX3-211ENST00000458034 SH3RF1Q7Z6J0 888 aa12.44□□□□□ -0.42
RFX3-211ENST00000458034 FAM177A1Q8N128 213 aaPredicted RBP12.44□□□□□ -0.42
RFX3-211ENST00000458034 BAG1Q99933 345 aaPredicted RBP12.44□□□□□ -0.42
RFX3-211ENST00000458034 SH3GLB2Q9NR46 395 aa12.44□□□□□ -0.42
RFX3-211ENST00000458034 ZNF215Q9UL58 517 aaPredicted RBP12.44□□□□□ -0.42
RFX3-211ENST00000458034 NHSQ6T4R5 1651 aa12.44□□□□□ -0.42
RFX3-211ENST00000458034 BTAF1O14981 1849 aa12.44□□□□□ -0.42
RFX3-211ENST00000458034 SBF2Q86WG5 1849 aa12.44□□□□□ -0.42
RFX3-211ENST00000458034 TSPY2A6NKD2 308 aa12.43□□□□□ -0.42
RFX3-211ENST00000458034 TMEM232C9JQI7 657 aa12.43□□□□□ -0.42
RFX3-211ENST00000458034 ZPR1O75312 459 aa12.43□□□□□ -0.42
RFX3-211ENST00000458034 RPS6KA4O75676 772 aa12.43□□□□□ -0.42
RFX3-211ENST00000458034 BMP6P22004 513 aa12.43□□□□□ -0.42
RFX3-211ENST00000458034 SPAG1Q07617 926 aa12.43□□□□□ -0.42
RFX3-211ENST00000458034 PFKFB3Q16875 520 aaPredicted RBP12.43□□□□□ -0.42
RFX3-211ENST00000458034 TBC1D9BQ66K14 1250 aa12.43□□□□□ -0.42
RFX3-211ENST00000458034 TPTE2Q6XPS3 522 aa12.43□□□□□ -0.42
RFX3-211ENST00000458034 NBPF5PQ86XG9 351 aaPredicted RBP12.43□□□□□ -0.42
RFX3-211ENST00000458034 DZIP1Q86YF9 867 aaKnown RBP12.43□□□□□ -0.42
RFX3-211ENST00000458034 CERS3Q8IU89 383 aa12.43□□□□□ -0.42
RFX3-211ENST00000458034 PDILTQ8N807 584 aa12.43□□□□□ -0.42
RFX3-211ENST00000458034 IQUBQ8NA54 791 aa12.43□□□□□ -0.42
RFX3-211ENST00000458034 ANKRD20A12PQ8NF67 263 aa12.43□□□□□ -0.42
RFX3-211ENST00000458034 SYMPKQ92797 1274 aaKnown RBP12.43□□□□□ -0.42
RFX3-211ENST00000458034 CELF1Q92879 486 aaKnown RBP12.43□□□□□ -0.42
RFX3-211ENST00000458034 TNFRSF25Q93038 417 aa12.43□□□□□ -0.42
RFX3-211ENST00000458034 PAGE5Q96GU1 130 aa12.43□□□□□ -0.42
RFX3-211ENST00000458034 NAA15Q9BXJ9 866 aaKnown RBP12.43□□□□□ -0.42
RFX3-211ENST00000458034 KAT14Q9H8E8 782 aa12.43□□□□□ -0.42
RFX3-211ENST00000458034 DCP1AQ9NPI6 582 aaPredicted RBP12.43□□□□□ -0.42
RFX3-211ENST00000458034 RMND1Q9NWS8 449 aa12.43□□□□□ -0.42
RFX3-211ENST00000458034 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.43□□□□□ -0.42
RFX3-211ENST00000458034 PRDM1O75626 825 aa12.42□□□□□ -0.42
RFX3-211ENST00000458034 POTEJP0CG39 1038 aa12.42□□□□□ -0.42
RFX3-211ENST00000458034 MNX1P50219 401 aaPredicted RBP12.42□□□□□ -0.42
RFX3-211ENST00000458034 CBX1P83916 185 aa12.42□□□□□ -0.42
RFX3-211ENST00000458034 FMR1Q06787 632 aaKnown RBP eCLIP12.42□□□□□ -0.42
RFX3-211ENST00000458034 GALNT17Q6IS24 598 aa12.42□□□□□ -0.42
RFX3-211ENST00000458034 BICDL1Q6ZP65 573 aa12.42□□□□□ -0.42
RFX3-211ENST00000458034 C3orf67Q6ZVT6 689 aa12.42□□□□□ -0.42
RFX3-211ENST00000458034 PPFIBP1Q86W92 1011 aa12.42□□□□□ -0.42
RFX3-211ENST00000458034 MNS1Q8NEH6 495 aa12.42□□□□□ -0.42
RFX3-211ENST00000458034 WDR66Q8TBY9 1149 aa12.42□□□□□ -0.42
RFX3-211ENST00000458034 GTPBP4Q9BZE4 634 aaKnown RBP12.42□□□□□ -0.42
RFX3-211ENST00000458034 ARGLU1Q9NWB6 273 aaPredicted RBP12.42□□□□□ -0.42
RFX3-211ENST00000458034 DNAI1Q9UI46 699 aa12.42□□□□□ -0.42
RFX3-211ENST00000458034 METRNQ9UJH8 293 aa12.42□□□□□ -0.42
RFX3-211ENST00000458034 TAF1LQ8IZX4 1826 aa12.41□□□□□ -0.42
RFX3-211ENST00000458034 MYH1P12882 1939 aa12.41□□□□□ -0.42
RFX3-211ENST00000458034 CYP2D7A0A087X1C5 515 aa12.41□□□□□ -0.42
RFX3-211ENST00000458034 A0A1B0GTH6 734 aa12.41□□□□□ -0.42
RFX3-211ENST00000458034 NUTM2BA6NNL0 878 aaPredicted RBP12.41□□□□□ -0.42
RFX3-211ENST00000458034 NUTM2EB1AL46 878 aaPredicted RBP12.41□□□□□ -0.42
RFX3-211ENST00000458034 AKR1B15C9JRZ8 316 aaPredicted RBP12.41□□□□□ -0.42
RFX3-211ENST00000458034 GTPBP6O43824 516 aaPredicted RBP12.41□□□□□ -0.42
RFX3-211ENST00000458034 LDHCP07864 332 aa12.41□□□□□ -0.42
RFX3-211ENST00000458034 LONP1P36776 959 aaKnown RBP12.41□□□□□ -0.42
RFX3-211ENST00000458034 DPYDQ12882 1025 aa12.41□□□□□ -0.42
RFX3-211ENST00000458034 SEMA3FQ13275 785 aa12.41□□□□□ -0.42
RFX3-211ENST00000458034 NR1I3Q14994 352 aa12.41□□□□□ -0.42
RFX3-211ENST00000458034 ZNF174Q15697 407 aa12.41□□□□□ -0.42
RFX3-211ENST00000458034 CCDC93Q567U6 631 aa12.41□□□□□ -0.42
RFX3-211ENST00000458034 UTP14CQ5TAP6 766 aaKnown RBP12.41□□□□□ -0.42
RFX3-211ENST00000458034 ARL6IP4Q66PJ3 421 aaKnown RBP12.41□□□□□ -0.42
RFX3-211ENST00000458034 ASTLQ6HA08 431 aaPredicted RBP12.41□□□□□ -0.42
RFX3-211ENST00000458034 DGKHQ86XP1 1220 aa12.41□□□□□ -0.42
RFX3-211ENST00000458034 SRBD1Q8N5C6 995 aaKnown RBP12.41□□□□□ -0.42
RFX3-211ENST00000458034 CCDC148Q8NFR7 591 aa12.41□□□□□ -0.42
RFX3-211ENST00000458034 ANKS1AQ92625 1134 aa12.41□□□□□ -0.42
RFX3-211ENST00000458034 CCDC51Q96ER9 411 aa12.41□□□□□ -0.42
RFX3-211ENST00000458034 PANX2Q96RD6 677 aa12.41□□□□□ -0.42
RFX3-211ENST00000458034 ZNF287Q9HBT7 754 aa12.41□□□□□ -0.42
RFX3-211ENST00000458034 INTS13Q9NVM9 706 aa12.41□□□□□ -0.42
RFX3-211ENST00000458034 PCDH10Q9P2E7 1040 aa12.41□□□□□ -0.42
RFX3-211ENST00000458034 PPP2R2CQ9Y2T4 447 aa12.41□□□□□ -0.42
RFX3-211ENST00000458034 LEMD3Q9Y2U8 911 aa12.41□□□□□ -0.42
RFX3-211ENST00000458034 ROBO3Q96MS0 1386 aa12.41□□□□□ -0.42
RFX3-211ENST00000458034 LTBP4Q8N2S1 1624 aa12.4□□□□□ -0.42
RFX3-211ENST00000458034 VWA3AA6NCI4 1184 aa12.4□□□□□ -0.42
RFX3-211ENST00000458034 KCNQ2O43526 872 aa12.4□□□□□ -0.42
RFX3-211ENST00000458034 BAG3O95817 575 aa12.4□□□□□ -0.42
RFX3-211ENST00000458034 CASQ1P31415 396 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms