RNA–Protein interactions for RNA: ENST00000456754.6

TIMP1-205, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 1 (best) BASIC

Gene TIMP1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-205ENST00000456754 SEC23AQ15436 765 aa16.57■□□□□ 0.24
TIMP1-205ENST00000456754 TSGA10IPQ3SY00 556 aa16.57■□□□□ 0.24
TIMP1-205ENST00000456754 RNF20Q5VTR2 975 aa16.57■□□□□ 0.24
TIMP1-205ENST00000456754 TBC1D2Q9BYX2 928 aa16.57■□□□□ 0.24
TIMP1-205ENST00000456754 VCPKMTQ9H867 229 aa16.57■□□□□ 0.24
TIMP1-205ENST00000456754 RNF186Q9NXI6 227 aa16.57■□□□□ 0.24
TIMP1-205ENST00000456754 RLFQ13129 1914 aa16.57■□□□□ 0.24
TIMP1-205ENST00000456754 PARP14Q460N5 1801 aa16.56■□□□□ 0.24
TIMP1-205ENST00000456754 C19orf81C9J6K1 198 aa16.56■□□□□ 0.24
TIMP1-205ENST00000456754 PDHXO00330 501 aa16.56■□□□□ 0.24
TIMP1-205ENST00000456754 PRC1O43663 620 aa16.56■□□□□ 0.24
TIMP1-205ENST00000456754 TRPA1O75762 1119 aa16.56■□□□□ 0.24
TIMP1-205ENST00000456754 TBC1D8O95759 1140 aa16.56■□□□□ 0.24
TIMP1-205ENST00000456754 NDUFB10O96000 172 aa16.56■□□□□ 0.24
TIMP1-205ENST00000456754 POTEEQ6S8J3 1075 aa16.56■□□□□ 0.24
TIMP1-205ENST00000456754 JMYQ8N9B5 988 aa16.56■□□□□ 0.24
TIMP1-205ENST00000456754 MKL1Q969V6 931 aa16.56■□□□□ 0.24
TIMP1-205ENST00000456754 NEK1Q96PY6 1258 aa16.56■□□□□ 0.24
TIMP1-205ENST00000456754 TMOD4Q9NZQ9 345 aa16.56■□□□□ 0.24
TIMP1-205ENST00000456754 AGTPBP1Q9UPW5 1226 aa16.56■□□□□ 0.24
TIMP1-205ENST00000456754 F5H6K3 240 aa16.55■□□□□ 0.24
TIMP1-205ENST00000456754 IFIT3O14879 490 aaKnown RBP16.55■□□□□ 0.24
TIMP1-205ENST00000456754 ZKSCAN1P17029 563 aaPredicted RBP16.55■□□□□ 0.24
TIMP1-205ENST00000456754 KLRC3Q07444 240 aa16.55■□□□□ 0.24
TIMP1-205ENST00000456754 FAM83BQ5T0W9 1011 aa16.55■□□□□ 0.24
TIMP1-205ENST00000456754 ANKRD23Q86SG2 305 aa16.55■□□□□ 0.24
TIMP1-205ENST00000456754 IGDCC4Q8TDY8 1250 aa16.55■□□□□ 0.24
TIMP1-205ENST00000456754 C12orf42Q96LP6 360 aa16.55■□□□□ 0.24
TIMP1-205ENST00000456754 UBAC1Q9BSL1 405 aa16.55■□□□□ 0.24
TIMP1-205ENST00000456754 RPAP3Q9H6T3 665 aaPredicted RBP16.55■□□□□ 0.24
TIMP1-205ENST00000456754 WBP1LQ9NX94 342 aa16.55■□□□□ 0.24
TIMP1-205ENST00000456754 TOP1P11387 765 aaKnown RBP16.54■□□□□ 0.24
TIMP1-205ENST00000456754 EXOSC10Q01780 885 aaKnown RBP16.54■□□□□ 0.24
TIMP1-205ENST00000456754 CRHR2Q13324 411 aa16.54■□□□□ 0.24
TIMP1-205ENST00000456754 SLFN13Q68D06 897 aa16.54■□□□□ 0.24
TIMP1-205ENST00000456754 FASTKD5Q7L8L6 764 aaKnown RBP16.54■□□□□ 0.24
TIMP1-205ENST00000456754 IQCA1Q86XH1 822 aa16.54■□□□□ 0.24
TIMP1-205ENST00000456754 RAB11FIP4Q86YS3 637 aa16.54■□□□□ 0.24
TIMP1-205ENST00000456754 PROCA1Q8NCQ7 364 aaPredicted RBP16.54■□□□□ 0.24
TIMP1-205ENST00000456754 BACH2Q9BYV9 841 aa16.54■□□□□ 0.24
TIMP1-205ENST00000456754 UPF3BQ9BZI7 483 aaKnown RBP16.54■□□□□ 0.24
TIMP1-205ENST00000456754 FBXO28Q9NVF7 368 aa16.54■□□□□ 0.24
TIMP1-205ENST00000456754 FRMPD2Q68DX3 1309 aaPredicted RBP16.53■□□□□ 0.24
TIMP1-205ENST00000456754 SH2B2O14492 632 aaPredicted RBP16.53■□□□□ 0.24
TIMP1-205ENST00000456754 EPB41L2O43491 1005 aaKnown RBP16.53■□□□□ 0.24
TIMP1-205ENST00000456754 CASTP20810 708 aaKnown RBP16.53■□□□□ 0.24
TIMP1-205ENST00000456754 MCCP23508 829 aa16.53■□□□□ 0.24
TIMP1-205ENST00000456754 USP14P54578 494 aa16.53■□□□□ 0.24
TIMP1-205ENST00000456754 TAF1CQ15572 869 aaPredicted RBP16.53■□□□□ 0.24
TIMP1-205ENST00000456754 TMEM67Q5HYA8 995 aa16.53■□□□□ 0.24
TIMP1-205ENST00000456754 SAMD1Q6SPF0 538 aaPredicted RBP16.53■□□□□ 0.24
TIMP1-205ENST00000456754 ANKS1AQ92625 1134 aa16.53■□□□□ 0.24
TIMP1-205ENST00000456754 MYL10Q9BUA6 226 aa16.53■□□□□ 0.24
TIMP1-205ENST00000456754 ASCC2Q9H1I8 757 aaPredicted RBP16.53■□□□□ 0.24
TIMP1-205ENST00000456754 LY9Q9HBG7 655 aa16.53■□□□□ 0.24
TIMP1-205ENST00000456754 ZSWIM8A7E2V4 1837 aa16.53■□□□□ 0.24
TIMP1-205ENST00000456754 ECM2O94769 699 aaPredicted RBP16.52■□□□□ 0.24
TIMP1-205ENST00000456754 MCM5P33992 734 aa16.52■□□□□ 0.24
TIMP1-205ENST00000456754 INHBEP58166 350 aa16.52■□□□□ 0.24
TIMP1-205ENST00000456754 KRT32Q14532 448 aa16.52■□□□□ 0.24
TIMP1-205ENST00000456754 TTBK2Q6IQ55 1244 aa16.52■□□□□ 0.24
TIMP1-205ENST00000456754 KCTD1Q719H9 257 aa16.52■□□□□ 0.24
TIMP1-205ENST00000456754 DHX32Q7L7V1 743 aaKnown RBP16.52■□□□□ 0.24
TIMP1-205ENST00000456754 DGKHQ86XP1 1220 aa16.52■□□□□ 0.24
TIMP1-205ENST00000456754 GMCL1P1Q8NEA9 526 aa16.52■□□□□ 0.24
TIMP1-205ENST00000456754 P2RX7Q99572 595 aaKnown RBP16.52■□□□□ 0.24
TIMP1-205ENST00000456754 LARP6Q9BRS8 491 aaKnown RBP16.52■□□□□ 0.24
TIMP1-205ENST00000456754 TANGO6Q9C0B7 1094 aa16.52■□□□□ 0.24
TIMP1-205ENST00000456754 CPVLQ9H3G5 476 aa16.52■□□□□ 0.24
TIMP1-205ENST00000456754 SH2D4AQ9H788 454 aa16.52■□□□□ 0.24
TIMP1-205ENST00000456754 GOPCQ9HD26 462 aa16.52■□□□□ 0.24
TIMP1-205ENST00000456754 COL11A1P12107 1806 aaPredicted RBP16.52■□□□□ 0.23
TIMP1-205ENST00000456754 ADGRA2Q96PE1 1338 aa16.51■□□□□ 0.23
TIMP1-205ENST00000456754 FOXN1O15353 648 aa16.51■□□□□ 0.23
TIMP1-205ENST00000456754 GOLGA8HP0CJ92 632 aa16.51■□□□□ 0.23
TIMP1-205ENST00000456754 HSPA1AP0DMV8 641 aaKnown RBP16.51■□□□□ 0.23
TIMP1-205ENST00000456754 HSPA1BP0DMV9 641 aaKnown RBP16.51■□□□□ 0.23
TIMP1-205ENST00000456754 RPS6KB1P23443 525 aa16.51■□□□□ 0.23
TIMP1-205ENST00000456754 MAP2K1Q02750 393 aaPredicted RBP16.51■□□□□ 0.23
TIMP1-205ENST00000456754 WTAPQ15007 396 aa16.51■□□□□ 0.23
TIMP1-205ENST00000456754 IFIT1BQ5T764 474 aaKnown RBP16.51■□□□□ 0.23
TIMP1-205ENST00000456754 BLOC1S2Q6QNY1 142 aa16.51■□□□□ 0.23
TIMP1-205ENST00000456754 CATSPERGQ6ZRH7 1159 aa16.51■□□□□ 0.23
TIMP1-205ENST00000456754 PNMA1Q8ND90 353 aa16.51■□□□□ 0.23
TIMP1-205ENST00000456754 TTC14Q96N46 770 aa16.51■□□□□ 0.23
TIMP1-205ENST00000456754 KIF2CQ99661 725 aa16.51■□□□□ 0.23
TIMP1-205ENST00000456754 KAT14Q9H8E8 782 aa16.51■□□□□ 0.23
TIMP1-205ENST00000456754 CPA4Q9UI42 421 aa16.51■□□□□ 0.23
TIMP1-205ENST00000456754 ISY1Q9ULR0 285 aaKnown RBP16.51■□□□□ 0.23
TIMP1-205ENST00000456754 USP17L15C9J2P7 530 aa16.5■□□□□ 0.23
TIMP1-205ENST00000456754 USP17L13C9JLJ4 530 aa16.5■□□□□ 0.23
TIMP1-205ENST00000456754 USP17L11C9JVI0 530 aa16.5■□□□□ 0.23
TIMP1-205ENST00000456754 USP17L18D6R9N7 530 aa16.5■□□□□ 0.23
TIMP1-205ENST00000456754 USP17L22D6RA61 530 aa16.5■□□□□ 0.23
TIMP1-205ENST00000456754 USP17L17D6RBQ6 530 aa16.5■□□□□ 0.23
TIMP1-205ENST00000456754 USP17L19D6RCP7 530 aa16.5■□□□□ 0.23
TIMP1-205ENST00000456754 USP17L20D6RJB6 530 aa16.5■□□□□ 0.23
TIMP1-205ENST00000456754 WDR46O15213 610 aaKnown RBP16.5■□□□□ 0.23
TIMP1-205ENST00000456754 PDHBP11177 359 aa16.5■□□□□ 0.23
TIMP1-205ENST00000456754 RXRAP19793 462 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms