RNA–Protein interactions for RNA: ENST00000456096.6

TVP23A-202, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 1,223 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-202ENST00000456096 RPAP2Q8IXW5 612 aaPredicted RBP20.25■□□□□ 0.83
TVP23A-202ENST00000456096 SLC17A8Q8NDX2 589 aa20.25■□□□□ 0.83
TVP23A-202ENST00000456096 MOV10L1Q9BXT6 1211 aaKnown RBP20.25■□□□□ 0.83
TVP23A-202ENST00000456096 TANGO6Q9C0B7 1094 aa20.25■□□□□ 0.83
TVP23A-202ENST00000456096 ARMT1Q9H993 441 aa20.25■□□□□ 0.83
TVP23A-202ENST00000456096 HOXC10Q9NYD6 342 aa20.25■□□□□ 0.83
TVP23A-202ENST00000456096 DDX20Q9UHI6 824 aaKnown RBP20.25■□□□□ 0.83
TVP23A-202ENST00000456096 MS4A1P11836 297 aa20.24■□□□□ 0.83
TVP23A-202ENST00000456096 SLFNL1Q499Z3 407 aa20.24■□□□□ 0.83
TVP23A-202ENST00000456096 KIAA1755Q5JYT7 1200 aa20.24■□□□□ 0.83
TVP23A-202ENST00000456096 GPR153Q6NV75 609 aa20.24■□□□□ 0.83
TVP23A-202ENST00000456096 TRPV1Q8NER1 839 aa20.24■□□□□ 0.83
TVP23A-202ENST00000456096 DYNLL2Q96FJ2 89 aa20.24■□□□□ 0.83
TVP23A-202ENST00000456096 SENP6Q9GZR1 1112 aaPredicted RBP20.24■□□□□ 0.83
TVP23A-202ENST00000456096 ZBED9Q6R2W3 1325 aa20.24■□□□□ 0.83
TVP23A-202ENST00000456096 PRKAB2O43741 272 aa20.23■□□□□ 0.83
TVP23A-202ENST00000456096 IGHA2P01877 340 aa20.23■□□□□ 0.83
TVP23A-202ENST00000456096 MDM2Q00987 491 aaPredicted RBP20.23■□□□□ 0.83
TVP23A-202ENST00000456096 TMEM179Q6ZVK1 233 aa20.23■□□□□ 0.83
TVP23A-202ENST00000456096 DPP9Q86TI2 863 aa20.23■□□□□ 0.83
TVP23A-202ENST00000456096 DEFB123Q8N688 67 aa20.23■□□□□ 0.83
TVP23A-202ENST00000456096 LPAR1Q92633 364 aa20.23■□□□□ 0.83
TVP23A-202ENST00000456096 SPATC1LQ9H0A9 340 aa20.23■□□□□ 0.83
TVP23A-202ENST00000456096 SWAP70Q9UH65 585 aa20.23■□□□□ 0.83
TVP23A-202ENST00000456096 RLFQ13129 1914 aa20.23■□□□□ 0.83
TVP23A-202ENST00000456096 STRNO43815 780 aa20.22■□□□□ 0.83
TVP23A-202ENST00000456096 MSCO60682 206 aa20.22■□□□□ 0.83
TVP23A-202ENST00000456096 HMMRO75330 724 aa20.22■□□□□ 0.83
TVP23A-202ENST00000456096 ADORA2AP29274 412 aa20.22■□□□□ 0.83
TVP23A-202ENST00000456096 Q7L0L9 218 aa20.22■□□□□ 0.83
TVP23A-202ENST00000456096 CLEC10AQ8IUN9 316 aa20.22■□□□□ 0.83
TVP23A-202ENST00000456096 SIAH1Q8IUQ4 282 aa20.22■□□□□ 0.83
TVP23A-202ENST00000456096 BOLA2Q9H3K6 86 aa20.22■□□□□ 0.83
TVP23A-202ENST00000456096 ZBTB40Q9NUA8 1239 aa20.22■□□□□ 0.83
TVP23A-202ENST00000456096 PAG1Q9NWQ8 432 aa20.22■□□□□ 0.83
TVP23A-202ENST00000456096 COG6Q9Y2V7 657 aa20.22■□□□□ 0.83
TVP23A-202ENST00000456096 MYH8P13535 1937 aa20.21■□□□□ 0.83
TVP23A-202ENST00000456096 SMIM22K7EJ46 135 aa20.21■□□□□ 0.83
TVP23A-202ENST00000456096 RAB11FIP3O75154 756 aa20.21■□□□□ 0.83
TVP23A-202ENST00000456096 MBD4O95243 580 aa20.21■□□□□ 0.83
TVP23A-202ENST00000456096 CYBAP13498 195 aa20.21■□□□□ 0.83
TVP23A-202ENST00000456096 AKR1B1P15121 316 aa20.21■□□□□ 0.83
TVP23A-202ENST00000456096 ERCC3P19447 782 aa20.21■□□□□ 0.83
TVP23A-202ENST00000456096 ADD2P35612 726 aa20.21■□□□□ 0.83
TVP23A-202ENST00000456096 SPICE1Q8N0Z3 855 aa20.21■□□□□ 0.83
TVP23A-202ENST00000456096 BAZ2AQ9UIF9 1905 aaKnown RBP20.21■□□□□ 0.83
TVP23A-202ENST00000456096 CYP2D7A0A087X1C5 515 aa20.2■□□□□ 0.82
TVP23A-202ENST00000456096 DSG3P32926 999 aa20.2■□□□□ 0.82
TVP23A-202ENST00000456096 ATN1P54259 1190 aaPredicted RBP20.2■□□□□ 0.82
TVP23A-202ENST00000456096 PLS1Q14651 629 aa20.2■□□□□ 0.82
TVP23A-202ENST00000456096 OLFML2BQ68BL8 750 aa20.2■□□□□ 0.82
TVP23A-202ENST00000456096 SHCBP1Q8NEM2 672 aa20.2■□□□□ 0.82
TVP23A-202ENST00000456096 ATP8A2Q9NTI2 1148 aa20.2■□□□□ 0.82
TVP23A-202ENST00000456096 DDX19BQ9UMR2 479 aa20.2■□□□□ 0.82
TVP23A-202ENST00000456096 A0A0G2JMZ2 1700 aa20.19■□□□□ 0.82
TVP23A-202ENST00000456096 ZNF236Q9UL36 1845 aa20.19■□□□□ 0.82
TVP23A-202ENST00000456096 DNM1LO00429 736 aa20.19■□□□□ 0.82
TVP23A-202ENST00000456096 COBLO75128 1261 aa20.19■□□□□ 0.82
TVP23A-202ENST00000456096 FLOT1O75955 427 aa20.19■□□□□ 0.82
TVP23A-202ENST00000456096 CHGBP05060 677 aa20.19■□□□□ 0.82
TVP23A-202ENST00000456096 ATP5JP18859 108 aa20.19■□□□□ 0.82
TVP23A-202ENST00000456096 MB21D1Q8N884 522 aa20.19■□□□□ 0.82
TVP23A-202ENST00000456096 ATG4CQ96DT6 458 aa20.19■□□□□ 0.82
TVP23A-202ENST00000456096 ARHGEF10LQ9HCE6 1279 aa20.19■□□□□ 0.82
TVP23A-202ENST00000456096 TMX2Q9Y320 296 aa20.19■□□□□ 0.82
TVP23A-202ENST00000456096 CUL9Q8IWT3 2517 aa20.18■□□□□ 0.82
TVP23A-202ENST00000456096 ICA1Q05084 483 aa20.18■□□□□ 0.82
TVP23A-202ENST00000456096 GJC2Q5T442 439 aaPredicted RBP20.18■□□□□ 0.82
TVP23A-202ENST00000456096 C12orf60Q5U649 245 aa20.18■□□□□ 0.82
TVP23A-202ENST00000456096 ANO1Q5XXA6 986 aa20.18■□□□□ 0.82
TVP23A-202ENST00000456096 DIEXFQ68CQ4 756 aaKnown RBP20.18■□□□□ 0.82
TVP23A-202ENST00000456096 NCAPG2Q86XI2 1143 aa20.18■□□□□ 0.82
TVP23A-202ENST00000456096 HAUS7Q99871 368 aa20.18■□□□□ 0.82
TVP23A-202ENST00000456096 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.18■□□□□ 0.82
TVP23A-202ENST00000456096 MROH8Q9H579 483 aa20.18■□□□□ 0.82
TVP23A-202ENST00000456096 VCPKMTQ9H867 229 aa20.18■□□□□ 0.82
TVP23A-202ENST00000456096 UNC80Q8N2C7 3258 aa20.17■□□□□ 0.82
TVP23A-202ENST00000456096 USP17L12C9JPN9 530 aa20.17■□□□□ 0.82
TVP23A-202ENST00000456096 USP17L21D6R901 530 aa20.17■□□□□ 0.82
TVP23A-202ENST00000456096 DLL1O00548 723 aa20.17■□□□□ 0.82
TVP23A-202ENST00000456096 CDK8P49336 464 aa20.17■□□□□ 0.82
TVP23A-202ENST00000456096 SAMD1Q6SPF0 538 aaPredicted RBP20.17■□□□□ 0.82
TVP23A-202ENST00000456096 ARRDC4Q8NCT1 418 aa20.17■□□□□ 0.82
TVP23A-202ENST00000456096 CCDC17Q96LX7 622 aa20.17■□□□□ 0.82
TVP23A-202ENST00000456096 LBHD1Q9BQE6 289 aaPredicted RBP20.17■□□□□ 0.82
TVP23A-202ENST00000456096 SH2D4AQ9H788 454 aa20.17■□□□□ 0.82
TVP23A-202ENST00000456096 MTMR10Q9NXD2 777 aa20.17■□□□□ 0.82
TVP23A-202ENST00000456096 ZNFX1Q9P2E3 1918 aaKnown RBP20.16■□□□□ 0.82
TVP23A-202ENST00000456096 RTP1P59025 263 aa20.16■□□□□ 0.82
TVP23A-202ENST00000456096 UBE3CQ15386 1083 aa20.16■□□□□ 0.82
TVP23A-202ENST00000456096 PRAMEF19Q5SWL8 479 aa20.16■□□□□ 0.82
TVP23A-202ENST00000456096 ABRAQ8N0Z2 381 aa20.16■□□□□ 0.82
TVP23A-202ENST00000456096 SLC5A4Q9NY91 659 aa20.16■□□□□ 0.82
TVP23A-202ENST00000456096 PARP14Q460N5 1801 aa20.16■□□□□ 0.82
TVP23A-202ENST00000456096 WDR46O15213 610 aaKnown RBP20.15■□□□□ 0.82
TVP23A-202ENST00000456096 SEPT4O43236 478 aa20.15■□□□□ 0.82
TVP23A-202ENST00000456096 EEF2P13639 858 aaKnown RBP20.15■□□□□ 0.82
TVP23A-202ENST00000456096 TMEM132BQ14DG7 1078 aa20.15■□□□□ 0.82
TVP23A-202ENST00000456096 C16orf86Q6ZW13 317 aa20.15■□□□□ 0.82
TVP23A-202ENST00000456096 AMOTL1Q8IY63 956 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms