RNA–Protein interactions for RNA: ENST00000456013.5

PTPN6-204, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 1 (best) BASIC

Gene PTPN6, Length 2,389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-204ENST00000456013 CCDC152Q4G0S7 254 aa20.06■□□□□ 0.8
PTPN6-204ENST00000456013 HNRNPLLQ8WVV9 542 aaKnown RBP20.06■□□□□ 0.8
PTPN6-204ENST00000456013 ATRIPQ8WXE1 791 aa20.06■□□□□ 0.8
PTPN6-204ENST00000456013 LIMA1Q9UHB6 759 aaKnown RBP20.06■□□□□ 0.8
PTPN6-204ENST00000456013 TTF2Q9UNY4 1162 aaKnown RBP20.06■□□□□ 0.8
PTPN6-204ENST00000456013 LAMB2P55268 1798 aa20.05■□□□□ 0.8
PTPN6-204ENST00000456013 POTEB2H3BUK9 544 aa20.05■□□□□ 0.8
PTPN6-204ENST00000456013 PLEKHA8P1O95397 391 aa20.05■□□□□ 0.8
PTPN6-204ENST00000456013 FXR1P51114 621 aaKnown RBP eCLIP20.05■□□□□ 0.8
PTPN6-204ENST00000456013 ATP2C1P98194 919 aaPredicted RBP20.05■□□□□ 0.8
PTPN6-204ENST00000456013 ZNF174Q15697 407 aa20.05■□□□□ 0.8
PTPN6-204ENST00000456013 ZNF569Q5MCW4 686 aa20.05■□□□□ 0.8
PTPN6-204ENST00000456013 TTC38Q5R3I4 469 aa20.05■□□□□ 0.8
PTPN6-204ENST00000456013 IFIT1BQ5T764 474 aaKnown RBP20.05■□□□□ 0.8
PTPN6-204ENST00000456013 LRRC10BA6NIK2 292 aa20.05■□□□□ 0.8
PTPN6-204ENST00000456013 MAP2K7O14733 419 aa20.05■□□□□ 0.8
PTPN6-204ENST00000456013 CALM1P0DP23 149 aa20.05■□□□□ 0.8
PTPN6-204ENST00000456013 CALM2P0DP24 149 aa20.05■□□□□ 0.8
PTPN6-204ENST00000456013 CALM3P0DP25 149 aa20.05■□□□□ 0.8
PTPN6-204ENST00000456013 NPY5RQ15761 445 aa20.05■□□□□ 0.8
PTPN6-204ENST00000456013 TMTC1Q8IUR5 882 aa20.05■□□□□ 0.8
PTPN6-204ENST00000456013 TXLNBQ8N3L3 684 aa20.05■□□□□ 0.8
PTPN6-204ENST00000456013 ANKZF1Q9H8Y5 726 aa20.05■□□□□ 0.8
PTPN6-204ENST00000456013 ZCCHC17Q9NP64 241 aaKnown RBP20.05■□□□□ 0.8
PTPN6-204ENST00000456013 CTNND2Q9UQB3 1225 aa20.05■□□□□ 0.8
PTPN6-204ENST00000456013 XDHP47989 1333 aa20.04■□□□□ 0.8
PTPN6-204ENST00000456013 CACNA1SQ13698 1873 aa20.04■□□□□ 0.8
PTPN6-204ENST00000456013 CICQ96RK0 1608 aaPredicted RBP20.04■□□□□ 0.8
PTPN6-204ENST00000456013 hCG_1642624A0A1W2PR95 340 aa20.04■□□□□ 0.8
PTPN6-204ENST00000456013 E2F4Q16254 413 aa20.04■□□□□ 0.8
PTPN6-204ENST00000456013 MSANTD4Q8NCY6 345 aa20.04■□□□□ 0.8
PTPN6-204ENST00000456013 SLAIN2Q9P270 581 aa20.04■□□□□ 0.8
PTPN6-204ENST00000456013 RAB21Q9UL25 225 aa20.04■□□□□ 0.8
PTPN6-204ENST00000456013 DISP2A7MBM2 1401 aa20.04■□□□□ 0.8
PTPN6-204ENST00000456013 SMIM22K7EJ46 135 aa20.03■□□□□ 0.8
PTPN6-204ENST00000456013 EIF5P55010 431 aaKnown RBP20.03■□□□□ 0.8
PTPN6-204ENST00000456013 HNRNPH2P55795 449 aaKnown RBP20.03■□□□□ 0.8
PTPN6-204ENST00000456013 CHRNDQ07001 517 aa20.03■□□□□ 0.8
PTPN6-204ENST00000456013 TROAPQ12815 778 aa20.03■□□□□ 0.8
PTPN6-204ENST00000456013 PTGDRQ13258 359 aa20.03■□□□□ 0.8
PTPN6-204ENST00000456013 KRT31Q15323 416 aa20.03■□□□□ 0.8
PTPN6-204ENST00000456013 IQUBQ8NA54 791 aa20.03■□□□□ 0.8
PTPN6-204ENST00000456013 RIOK1Q9BRS2 568 aaKnown RBP20.03■□□□□ 0.8
PTPN6-204ENST00000456013 ZSWIM4Q9H7M6 989 aa20.03■□□□□ 0.8
PTPN6-204ENST00000456013 CTAGE9A4FU28 777 aa20.03■□□□□ 0.8
PTPN6-204ENST00000456013 USP5P45974 858 aa20.03■□□□□ 0.8
PTPN6-204ENST00000456013 ST5P78524 1137 aa20.03■□□□□ 0.8
PTPN6-204ENST00000456013 IQCA1Q86XH1 822 aa20.03■□□□□ 0.8
PTPN6-204ENST00000456013 PYM1Q9BRP8 204 aaKnown RBP20.03■□□□□ 0.8
PTPN6-204ENST00000456013 PUF60Q9UHX1 559 aaKnown RBP20.03■□□□□ 0.8
PTPN6-204ENST00000456013 RWDD2AQ9UIY3 292 aa20.03■□□□□ 0.8
PTPN6-204ENST00000456013 DDAH1O94760 285 aa20.02■□□□□ 0.8
PTPN6-204ENST00000456013 FGRP09769 529 aa20.02■□□□□ 0.8
PTPN6-204ENST00000456013 PCP11498 1178 aaKnown RBP20.02■□□□□ 0.8
PTPN6-204ENST00000456013 SPAG1Q07617 926 aa20.02■□□□□ 0.8
PTPN6-204ENST00000456013 GPS2Q13227 327 aa20.02■□□□□ 0.8
PTPN6-204ENST00000456013 KIF4BQ2VIQ3 1234 aa20.02■□□□□ 0.8
PTPN6-204ENST00000456013 NOM1Q5C9Z4 860 aaKnown RBP20.02■□□□□ 0.8
PTPN6-204ENST00000456013 TMTC3Q6ZXV5 915 aa20.02■□□□□ 0.8
PTPN6-204ENST00000456013 ABCF2Q9UG63 623 aa20.02■□□□□ 0.8
PTPN6-204ENST00000456013 ZNF804BA4D1E1 1349 aa20.02■□□□□ 0.8
PTPN6-204ENST00000456013 CCT6AP40227 531 aaKnown RBP20.02■□□□□ 0.8
PTPN6-204ENST00000456013 TRIM14Q14142 442 aa20.02■□□□□ 0.8
PTPN6-204ENST00000456013 SLC35F6Q8N357 371 aa20.02■□□□□ 0.8
PTPN6-204ENST00000456013 BRIP1Q9BX63 1249 aa20.02■□□□□ 0.8
PTPN6-204ENST00000456013 ABHD10Q9NUJ1 306 aa20.02■□□□□ 0.8
PTPN6-204ENST00000456013 MYO1AQ9UBC5 1043 aa20.02■□□□□ 0.8
PTPN6-204ENST00000456013 N4BP3O15049 544 aa20.01■□□□□ 0.79
PTPN6-204ENST00000456013 ERVK-24P63145 666 aa20.01■□□□□ 0.79
PTPN6-204ENST00000456013 PARP10Q53GL7 1025 aa20.01■□□□□ 0.79
PTPN6-204ENST00000456013 RRAGBQ5VZM2 374 aa20.01■□□□□ 0.79
PTPN6-204ENST00000456013 PDXDC2PQ6P474 469 aa20.01■□□□□ 0.79
PTPN6-204ENST00000456013 ACRBPQ8NEB7 543 aa20.01■□□□□ 0.79
PTPN6-204ENST00000456013 STAMQ92783 540 aa20.01■□□□□ 0.79
PTPN6-204ENST00000456013 CNTNAP5Q8WYK1 1306 aa20.01■□□□□ 0.79
PTPN6-204ENST00000456013 A0A1B0GUL6 1792 aa20.01■□□□□ 0.79
PTPN6-204ENST00000456013 GTPBP6O43824 516 aaPredicted RBP20.01■□□□□ 0.79
PTPN6-204ENST00000456013 BEND6Q5SZJ8 279 aaPredicted RBP20.01■□□□□ 0.79
PTPN6-204ENST00000456013 NEK11Q8NG66 645 aa20.01■□□□□ 0.79
PTPN6-204ENST00000456013 IQSEC3Q9UPP2 1182 aaPredicted RBP20.01■□□□□ 0.79
PTPN6-204ENST00000456013 TRAPPC10P48553 1259 aa20■□□□□ 0.79
PTPN6-204ENST00000456013 COPB1P53618 953 aaKnown RBP20■□□□□ 0.79
PTPN6-204ENST00000456013 CYP26C1Q6V0L0 522 aa20■□□□□ 0.79
PTPN6-204ENST00000456013 MSL3Q8N5Y2 521 aaKnown RBP20■□□□□ 0.79
PTPN6-204ENST00000456013 NAPGQ99747 312 aaPredicted RBP20■□□□□ 0.79
PTPN6-204ENST00000456013 BLZF1Q9H2G9 400 aa20■□□□□ 0.79
PTPN6-204ENST00000456013 PAK1Q13153 545 aa20■□□□□ 0.79
PTPN6-204ENST00000456013 BTG4Q9NY30 223 aa20■□□□□ 0.79
PTPN6-204ENST00000456013 CYP2D7A0A087X1C5 515 aa19.99■□□□□ 0.79
PTPN6-204ENST00000456013 WHAMMP3Q1A5X7 153 aa19.99■□□□□ 0.79
PTPN6-204ENST00000456013 TCP11X2Q5H9J9 407 aa19.99■□□□□ 0.79
PTPN6-204ENST00000456013 ZNF658Q5TYW1 1059 aaPredicted RBP19.99■□□□□ 0.79
PTPN6-204ENST00000456013 ANKRD20A12PQ8NF67 263 aa19.99■□□□□ 0.79
PTPN6-204ENST00000456013 PNKPQ96T60 521 aa19.99■□□□□ 0.79
PTPN6-204ENST00000456013 CDC5LQ99459 802 aaKnown RBP19.99■□□□□ 0.79
PTPN6-204ENST00000456013 MTRQ99707 1265 aa19.99■□□□□ 0.79
PTPN6-204ENST00000456013 VPS16Q9H269 839 aa19.99■□□□□ 0.79
PTPN6-204ENST00000456013 GNL3LQ9NVN8 582 aaKnown RBP19.99■□□□□ 0.79
PTPN6-204ENST00000456013 PSD3Q9NYI0 1048 aa19.99■□□□□ 0.79
PTPN6-204ENST00000456013 H3BQF6 201 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms