RNA–Protein interactions for RNA: ENST00000455790.5

PDGFB-204, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 4

Gene PDGFB, Length 554 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-204ENST00000455790 ZKSCAN1P17029 563 aaPredicted RBP14.33□□□□□ -0.12
PDGFB-204ENST00000455790 HABP4Q5JVS0 413 aaKnown RBP14.33□□□□□ -0.12
PDGFB-204ENST00000455790 WDR78Q5VTH9 848 aa14.33□□□□□ -0.12
PDGFB-204ENST00000455790 CCAR1Q8IX12 1150 aaKnown RBP14.33□□□□□ -0.12
PDGFB-204ENST00000455790 AMOTL1Q8IY63 956 aa14.33□□□□□ -0.12
PDGFB-204ENST00000455790 STK11IPQ8N1F8 1099 aa14.33□□□□□ -0.12
PDGFB-204ENST00000455790 DDRGK1Q96HY6 314 aa14.33□□□□□ -0.12
PDGFB-204ENST00000455790 SEC62Q99442 399 aaKnown RBP14.33□□□□□ -0.12
PDGFB-204ENST00000455790 APBA2Q99767 749 aa14.33□□□□□ -0.12
PDGFB-204ENST00000455790 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.33□□□□□ -0.12
PDGFB-204ENST00000455790 ARPP21Q9UBL0 812 aaPredicted RBP14.33□□□□□ -0.12
PDGFB-204ENST00000455790 TMX2Q9Y320 296 aa14.33□□□□□ -0.12
PDGFB-204ENST00000455790 TTC41PQ6P2S7 1318 aa14.33□□□□□ -0.12
PDGFB-204ENST00000455790 SALL3Q9BXA9 1300 aa14.33□□□□□ -0.12
PDGFB-204ENST00000455790 ROBO3Q96MS0 1386 aa14.33□□□□□ -0.12
PDGFB-204ENST00000455790 EEF2P13639 858 aaKnown RBP14.32□□□□□ -0.12
PDGFB-204ENST00000455790 RGS2P41220 211 aa14.32□□□□□ -0.12
PDGFB-204ENST00000455790 CCNA1P78396 465 aa14.32□□□□□ -0.12
PDGFB-204ENST00000455790 DPF3Q92784 378 aa14.32□□□□□ -0.12
PDGFB-204ENST00000455790 GCC1Q96CN9 775 aa14.32□□□□□ -0.12
PDGFB-204ENST00000455790 CCDC17Q96LX7 622 aa14.32□□□□□ -0.12
PDGFB-204ENST00000455790 VCPKMTQ9H867 229 aa14.32□□□□□ -0.12
PDGFB-204ENST00000455790 ARHGEF10LQ9HCE6 1279 aa14.32□□□□□ -0.12
PDGFB-204ENST00000455790 CWC22Q9HCG8 908 aaKnown RBP14.32□□□□□ -0.12
PDGFB-204ENST00000455790 HMX1Q9NP08 348 aaPredicted RBP14.32□□□□□ -0.12
PDGFB-204ENST00000455790 FLRT1Q9NZU1 646 aa14.32□□□□□ -0.12
PDGFB-204ENST00000455790 COLQQ9Y215 455 aaPredicted RBP14.32□□□□□ -0.12
PDGFB-204ENST00000455790 GREB1LQ9C091 1923 aaPredicted RBP14.32□□□□□ -0.12
PDGFB-204ENST00000455790 RPTORQ8N122 1335 aa14.32□□□□□ -0.12
PDGFB-204ENST00000455790 GLRX3O76003 335 aaKnown RBP14.31□□□□□ -0.12
PDGFB-204ENST00000455790 ZFYP08048 801 aaPredicted RBP14.31□□□□□ -0.12
PDGFB-204ENST00000455790 MX1P20591 662 aa14.31□□□□□ -0.12
PDGFB-204ENST00000455790 RASA1P20936 1047 aa14.31□□□□□ -0.12
PDGFB-204ENST00000455790 MNX1P50219 401 aaPredicted RBP14.31□□□□□ -0.12
PDGFB-204ENST00000455790 ATP2B2Q01814 1243 aa14.31□□□□□ -0.12
PDGFB-204ENST00000455790 CACNB2Q08289 660 aaPredicted RBP14.31□□□□□ -0.12
PDGFB-204ENST00000455790 MAP2K5Q13163 448 aa14.31□□□□□ -0.12
PDGFB-204ENST00000455790 COG2Q14746 738 aa14.31□□□□□ -0.12
PDGFB-204ENST00000455790 SBK1Q52WX2 424 aa14.31□□□□□ -0.12
PDGFB-204ENST00000455790 LPAR1Q92633 364 aa14.31□□□□□ -0.12
PDGFB-204ENST00000455790 ATG4CQ96DT6 458 aa14.31□□□□□ -0.12
PDGFB-204ENST00000455790 PAWRQ96IZ0 340 aaKnown RBP14.31□□□□□ -0.12
PDGFB-204ENST00000455790 MOV10L1Q9BXT6 1211 aaKnown RBP14.31□□□□□ -0.12
PDGFB-204ENST00000455790 SLC15A5A6NIM6 579 aa14.3□□□□□ -0.12
PDGFB-204ENST00000455790 MINDY4BA8MYZ0 360 aa14.3□□□□□ -0.12
PDGFB-204ENST00000455790 FLOT1O75955 427 aa14.3□□□□□ -0.12
PDGFB-204ENST00000455790 PTPREP23469 700 aa14.3□□□□□ -0.12
PDGFB-204ENST00000455790 CCND3P30281 292 aaPredicted RBP14.3□□□□□ -0.12
PDGFB-204ENST00000455790 GRB14Q14449 540 aa14.3□□□□□ -0.12
PDGFB-204ENST00000455790 GIMAP6Q6P9H5 292 aa14.3□□□□□ -0.12
PDGFB-204ENST00000455790 SAMD1Q6SPF0 538 aaPredicted RBP14.3□□□□□ -0.12
PDGFB-204ENST00000455790 FSD1Q9BTV5 496 aa14.3□□□□□ -0.12
PDGFB-204ENST00000455790 HTATIP2Q9BUP3 242 aa14.3□□□□□ -0.12
PDGFB-204ENST00000455790 SPATC1LQ9H0A9 340 aa14.3□□□□□ -0.12
PDGFB-204ENST00000455790 SH2D4AQ9H788 454 aa14.3□□□□□ -0.12
PDGFB-204ENST00000455790 FBXO28Q9NVF7 368 aa14.3□□□□□ -0.12
PDGFB-204ENST00000455790 PARP14Q460N5 1801 aa14.29□□□□□ -0.12
PDGFB-204ENST00000455790 ERC2O15083 957 aa14.29□□□□□ -0.12
PDGFB-204ENST00000455790 WDR46O15213 610 aaKnown RBP14.29□□□□□ -0.12
PDGFB-204ENST00000455790 DSG3P32926 999 aa14.29□□□□□ -0.12
PDGFB-204ENST00000455790 TDO2P48775 406 aa14.29□□□□□ -0.12
PDGFB-204ENST00000455790 ANKRD45Q5TZF3 282 aa14.29□□□□□ -0.12
PDGFB-204ENST00000455790 CHRDL2Q6WN34 429 aa14.29□□□□□ -0.12
PDGFB-204ENST00000455790 NPLOC4Q8TAT6 608 aa14.29□□□□□ -0.12
PDGFB-204ENST00000455790 KANSL2Q9H9L4 492 aa14.29□□□□□ -0.12
PDGFB-204ENST00000455790 ZNF236Q9UL36 1845 aa14.29□□□□□ -0.12
PDGFB-204ENST00000455790 ALPK3Q96L96 1907 aa14.29□□□□□ -0.12
PDGFB-204ENST00000455790 FOXP2O15409 715 aa14.28□□□□□ -0.12
PDGFB-204ENST00000455790 PRDM1O75626 825 aa14.28□□□□□ -0.12
PDGFB-204ENST00000455790 APPP05067 770 aa14.28□□□□□ -0.12
PDGFB-204ENST00000455790 ERCC3P19447 782 aa14.28□□□□□ -0.12
PDGFB-204ENST00000455790 ZMYM1Q5SVZ6 1142 aa14.28□□□□□ -0.12
PDGFB-204ENST00000455790 CCDC129Q6ZRS4 1044 aa14.28□□□□□ -0.12
PDGFB-204ENST00000455790 TRMT44Q8IYL2 757 aaKnown RBP14.28□□□□□ -0.12
PDGFB-204ENST00000455790 NUP88Q99567 741 aaPredicted RBP14.28□□□□□ -0.12
PDGFB-204ENST00000455790 TRIOBPQ9H2D6 2365 aa14.28□□□□□ -0.12
PDGFB-204ENST00000455790 HOXC10Q9NYD6 342 aa14.28□□□□□ -0.12
PDGFB-204ENST00000455790 OGDHLQ9ULD0 1010 aa14.28□□□□□ -0.12
PDGFB-204ENST00000455790 IVNS1ABPQ9Y6Y0 642 aa14.28□□□□□ -0.12
PDGFB-204ENST00000455790 IGKV6D-41A0A0C4DH26 115 aa14.27□□□□□ -0.13
PDGFB-204ENST00000455790 RAD21O60216 631 aa14.27□□□□□ -0.13
PDGFB-204ENST00000455790 HOXC6P09630 235 aa14.27□□□□□ -0.13
PDGFB-204ENST00000455790 GNAT2P19087 354 aa14.27□□□□□ -0.13
PDGFB-204ENST00000455790 ADORA2AP29274 412 aa14.27□□□□□ -0.13
PDGFB-204ENST00000455790 CYP2C19P33261 490 aa14.27□□□□□ -0.13
PDGFB-204ENST00000455790 HDAC1Q13547 482 aaPredicted RBP14.27□□□□□ -0.13
PDGFB-204ENST00000455790 PLS1Q14651 629 aa14.27□□□□□ -0.13
PDGFB-204ENST00000455790 TMEM132BQ14DG7 1078 aa14.27□□□□□ -0.13
PDGFB-204ENST00000455790 FAM83BQ5T0W9 1011 aa14.27□□□□□ -0.13
PDGFB-204ENST00000455790 LHX8Q68G74 356 aa14.27□□□□□ -0.13
PDGFB-204ENST00000455790 NECAB2Q7Z6G3 386 aa14.27□□□□□ -0.13
PDGFB-204ENST00000455790 IFNL3Q8IZI9 196 aa14.27□□□□□ -0.13
PDGFB-204ENST00000455790 ANKLE1Q8NAG6 615 aa14.27□□□□□ -0.13
PDGFB-204ENST00000455790 MKNK2Q9HBH9 465 aa14.27□□□□□ -0.13
PDGFB-204ENST00000455790 PCDH10Q9P2E7 1040 aa14.27□□□□□ -0.13
PDGFB-204ENST00000455790 DNAH12Q6ZR08 3092 aa14.26□□□□□ -0.13
PDGFB-204ENST00000455790 PFASO15067 1338 aa14.26□□□□□ -0.13
PDGFB-204ENST00000455790 PATL2C9JE40 543 aaKnown RBP14.26□□□□□ -0.13
PDGFB-204ENST00000455790 COBLO75128 1261 aa14.26□□□□□ -0.13
PDGFB-204ENST00000455790 IGHA2P01877 340 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms