RNA–Protein interactions for RNA: ENST00000455385.6

SYPL1-202, Transcript of synaptophysin like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYPL1, Length 2,151 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-202ENST00000455385 ARHGEF10LQ9HCE6 1279 aa12.59□□□□□ -0.39
SYPL1-202ENST00000455385 ABT1Q9ULW3 272 aaKnown RBP12.59□□□□□ -0.39
SYPL1-202ENST00000455385 F5H6K3 240 aa12.59□□□□□ -0.39
SYPL1-202ENST00000455385 RXRAP19793 462 aa12.59□□□□□ -0.39
SYPL1-202ENST00000455385 KLRC3Q07444 240 aa12.59□□□□□ -0.39
SYPL1-202ENST00000455385 TROAPQ12815 778 aa12.59□□□□□ -0.39
SYPL1-202ENST00000455385 MKRN3Q13064 507 aaKnown RBP12.59□□□□□ -0.39
SYPL1-202ENST00000455385 PPIL2Q13356 520 aa12.59□□□□□ -0.39
SYPL1-202ENST00000455385 MTMR2Q13614 643 aa12.59□□□□□ -0.39
SYPL1-202ENST00000455385 NFXL1Q6ZNB6 911 aa12.59□□□□□ -0.39
SYPL1-202ENST00000455385 WNK4Q96J92 1243 aa12.59□□□□□ -0.39
SYPL1-202ENST00000455385 KIAA1683Q9H0B3 1180 aa12.59□□□□□ -0.39
SYPL1-202ENST00000455385 AS3MTQ9HBK9 375 aa12.59□□□□□ -0.39
SYPL1-202ENST00000455385 EMILIN3Q9NT22 766 aa12.59□□□□□ -0.39
SYPL1-202ENST00000455385 MTMR7Q9Y216 660 aa12.59□□□□□ -0.39
SYPL1-202ENST00000455385 KLF18A0A0U1RQI7 1052 aa12.58□□□□□ -0.4
SYPL1-202ENST00000455385 CCDC69A6NI79 296 aa12.58□□□□□ -0.4
SYPL1-202ENST00000455385 ZNF157P51786 506 aaPredicted RBP12.58□□□□□ -0.4
SYPL1-202ENST00000455385 PPP4R3BQ5MIZ7 849 aa12.58□□□□□ -0.4
SYPL1-202ENST00000455385 SPRYD7Q5W111 196 aa12.58□□□□□ -0.4
SYPL1-202ENST00000455385 RGMBQ6NW40 437 aa12.58□□□□□ -0.4
SYPL1-202ENST00000455385 APOA5Q6Q788 366 aa12.58□□□□□ -0.4
SYPL1-202ENST00000455385 ZNF654Q8IZM8 581 aa12.58□□□□□ -0.4
SYPL1-202ENST00000455385 HPS5Q9UPZ3 1129 aa12.58□□□□□ -0.4
SYPL1-202ENST00000455385 KCNH4Q9UQ05 1017 aa12.58□□□□□ -0.4
SYPL1-202ENST00000455385 ST18O60284 1047 aa12.57□□□□□ -0.4
SYPL1-202ENST00000455385 LARGE1O95461 756 aa12.57□□□□□ -0.4
SYPL1-202ENST00000455385 PDIA3P30101 505 aaKnown RBP12.57□□□□□ -0.4
SYPL1-202ENST00000455385 HMGCS2P54868 508 aa12.57□□□□□ -0.4
SYPL1-202ENST00000455385 HTRA3P83110 453 aa12.57□□□□□ -0.4
SYPL1-202ENST00000455385 ME3Q16798 604 aa12.57□□□□□ -0.4
SYPL1-202ENST00000455385 RASAL3Q86YV0 1011 aa12.57□□□□□ -0.4
SYPL1-202ENST00000455385 SPICE1Q8N0Z3 855 aa12.57□□□□□ -0.4
SYPL1-202ENST00000455385 VCPKMTQ9H867 229 aa12.57□□□□□ -0.4
SYPL1-202ENST00000455385 CREBZFQ9NS37 354 aa12.57□□□□□ -0.4
SYPL1-202ENST00000455385 SLC12A7Q9Y666 1083 aa12.57□□□□□ -0.4
SYPL1-202ENST00000455385 FAM155AB1AL88 458 aaPredicted RBP12.57□□□□□ -0.4
SYPL1-202ENST00000455385 CXCL11O14625 94 aa12.57□□□□□ -0.4
SYPL1-202ENST00000455385 RAD21O60216 631 aa12.57□□□□□ -0.4
SYPL1-202ENST00000455385 NDUFB10O96000 172 aa12.57□□□□□ -0.4
SYPL1-202ENST00000455385 PDHBP11177 359 aa12.57□□□□□ -0.4
SYPL1-202ENST00000455385 ANKRD1Q15327 319 aa12.57□□□□□ -0.4
SYPL1-202ENST00000455385 SLFN13Q68D06 897 aa12.57□□□□□ -0.4
SYPL1-202ENST00000455385 USP17L2Q6R6M4 530 aa12.57□□□□□ -0.4
SYPL1-202ENST00000455385 GMCL1P1Q8NEA9 526 aa12.57□□□□□ -0.4
SYPL1-202ENST00000455385 MS4A4AQ96JQ5 239 aa12.57□□□□□ -0.4
SYPL1-202ENST00000455385 NUP88Q99567 741 aaPredicted RBP12.57□□□□□ -0.4
SYPL1-202ENST00000455385 FEZ1Q99689 392 aa12.57□□□□□ -0.4
SYPL1-202ENST00000455385 TBC1D2Q9BYX2 928 aa12.57□□□□□ -0.4
SYPL1-202ENST00000455385 SYNPO2Q9UMS6 1093 aa12.57□□□□□ -0.4
SYPL1-202ENST00000455385 C19orf81C9J6K1 198 aa12.56□□□□□ -0.4
SYPL1-202ENST00000455385 SNHG28P0DPA3 235 aa12.56□□□□□ -0.4
SYPL1-202ENST00000455385 MOGSQ13724 837 aa12.56□□□□□ -0.4
SYPL1-202ENST00000455385 SH3D19Q5HYK7 790 aa12.56□□□□□ -0.4
SYPL1-202ENST00000455385 CATIPQ7Z7H3 387 aa12.56□□□□□ -0.4
SYPL1-202ENST00000455385 CCDC144CPQ8IYA2 1237 aa12.56□□□□□ -0.4
SYPL1-202ENST00000455385 NUP133Q8WUM0 1156 aa12.56□□□□□ -0.4
SYPL1-202ENST00000455385 ZNF274Q96GC6 653 aaPredicted RBP12.56□□□□□ -0.4
SYPL1-202ENST00000455385 HHIPL1Q96JK4 782 aa12.56□□□□□ -0.4
SYPL1-202ENST00000455385 FAM217BQ9NTX9 383 aaPredicted RBP12.56□□□□□ -0.4
SYPL1-202ENST00000455385 NAP1L2Q9ULW6 460 aaPredicted RBP12.56□□□□□ -0.4
SYPL1-202ENST00000455385 LIMCH1Q9UPQ0 1083 aa12.56□□□□□ -0.4
SYPL1-202ENST00000455385 PTPRFP10586 1907 aa12.56□□□□□ -0.4
SYPL1-202ENST00000455385 A0A0G2JLL6 359 aaPredicted RBP12.56□□□□□ -0.4
SYPL1-202ENST00000455385 GOLGA8HP0CJ92 632 aa12.56□□□□□ -0.4
SYPL1-202ENST00000455385 STK3Q13188 491 aa12.56□□□□□ -0.4
SYPL1-202ENST00000455385 CYP4F22Q6NT55 531 aa12.56□□□□□ -0.4
SYPL1-202ENST00000455385 PRRT2Q7Z6L0 340 aaPredicted RBP12.56□□□□□ -0.4
SYPL1-202ENST00000455385 MICU3Q86XE3 530 aa12.56□□□□□ -0.4
SYPL1-202ENST00000455385 STAG2Q8N3U4 1231 aa12.56□□□□□ -0.4
SYPL1-202ENST00000455385 SH2D4AQ9H788 454 aa12.56□□□□□ -0.4
SYPL1-202ENST00000455385 RBM19Q9Y4C8 960 aaKnown RBP12.56□□□□□ -0.4
SYPL1-202ENST00000455385 ZBTB43O43298 467 aa12.55□□□□□ -0.4
SYPL1-202ENST00000455385 DDAH1O94760 285 aa12.55□□□□□ -0.4
SYPL1-202ENST00000455385 SLC10A3P09131 477 aa12.55□□□□□ -0.4
SYPL1-202ENST00000455385 CDC27P30260 824 aa12.55□□□□□ -0.4
SYPL1-202ENST00000455385 ST3GAL1Q11201 340 aa12.55□□□□□ -0.4
SYPL1-202ENST00000455385 DEFB115Q30KQ5 88 aa12.55□□□□□ -0.4
SYPL1-202ENST00000455385 TTBK2Q6IQ55 1244 aa12.55□□□□□ -0.4
SYPL1-202ENST00000455385 NECAB1Q8N987 351 aa12.55□□□□□ -0.4
SYPL1-202ENST00000455385 FANCBQ8NB91 859 aa12.55□□□□□ -0.4
SYPL1-202ENST00000455385 IL27Q8NEV9 243 aa12.55□□□□□ -0.4
SYPL1-202ENST00000455385 SNX21Q969T3 373 aa12.55□□□□□ -0.4
SYPL1-202ENST00000455385 C12orf42Q96LP6 360 aa12.55□□□□□ -0.4
SYPL1-202ENST00000455385 ZIC5Q96T25 663 aa12.55□□□□□ -0.4
SYPL1-202ENST00000455385 NCOA5Q9HCD5 579 aaKnown RBP12.55□□□□□ -0.4
SYPL1-202ENST00000455385 GOPCQ9HD26 462 aa12.55□□□□□ -0.4
SYPL1-202ENST00000455385 MAD2L2Q9UI95 211 aa12.55□□□□□ -0.4
SYPL1-202ENST00000455385 FRMPD2Q68DX3 1309 aaPredicted RBP12.55□□□□□ -0.4
SYPL1-202ENST00000455385 RASSF10A6NK89 507 aa12.54□□□□□ -0.4
SYPL1-202ENST00000455385 GOLGA8BA8MQT2 603 aa12.54□□□□□ -0.4
SYPL1-202ENST00000455385 DTNBO60941 627 aa12.54□□□□□ -0.4
SYPL1-202ENST00000455385 ZBTB48P10074 688 aaPredicted RBP12.54□□□□□ -0.4
SYPL1-202ENST00000455385 VCAM1P19320 739 aa12.54□□□□□ -0.4
SYPL1-202ENST00000455385 USP14P54578 494 aa12.54□□□□□ -0.4
SYPL1-202ENST00000455385 CCT2P78371 535 aaKnown RBP12.54□□□□□ -0.4
SYPL1-202ENST00000455385 GRM4Q14833 912 aa12.54□□□□□ -0.4
SYPL1-202ENST00000455385 FAM83BQ5T0W9 1011 aa12.54□□□□□ -0.4
SYPL1-202ENST00000455385 SYNE3Q6ZMZ3 975 aa12.54□□□□□ -0.4
SYPL1-202ENST00000455385 KCTD1Q719H9 257 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms