RNA–Protein interactions for RNA: ENST00000455228.1

LINC01940-201, Transcript of long intergenic non-protein coding RNA 1940, humanhuman

TSL 2 BASIC

Gene LINC01940, Length 3,489 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01940-201ENST00000455228 UBASH3AP57075 661 aa10.84□□□□□ -0.67
LINC01940-201ENST00000455228 EXOSC10Q01780 885 aaKnown RBP10.84□□□□□ -0.67
LINC01940-201ENST00000455228 DBN1Q16643 649 aa10.84□□□□□ -0.67
LINC01940-201ENST00000455228 SOGA3Q5TF21 947 aa10.84□□□□□ -0.67
LINC01940-201ENST00000455228 ILDR1Q86SU0 546 aaPredicted RBP10.84□□□□□ -0.67
LINC01940-201ENST00000455228 ACSBG1Q96GR2 724 aa10.84□□□□□ -0.67
LINC01940-201ENST00000455228 EBF2Q9HAK2 575 aa10.84□□□□□ -0.67
LINC01940-201ENST00000455228 JADE2Q9NQC1 790 aa10.84□□□□□ -0.67
LINC01940-201ENST00000455228 DNAAF2Q9NVR5 837 aaKnown RBP10.84□□□□□ -0.67
LINC01940-201ENST00000455228 RFX7Q2KHR2 1363 aa10.84□□□□□ -0.67
LINC01940-201ENST00000455228 MYBPC3Q14896 1274 aa10.83□□□□□ -0.67
LINC01940-201ENST00000455228 NUGGCQ68CJ6 796 aa10.83□□□□□ -0.67
LINC01940-201ENST00000455228 LMBR1LQ6UX01 489 aa10.83□□□□□ -0.67
LINC01940-201ENST00000455228 RAB11FIP4Q86YS3 637 aa10.83□□□□□ -0.67
LINC01940-201ENST00000455228 TTC5Q8N0Z6 440 aa10.83□□□□□ -0.67
LINC01940-201ENST00000455228 PIAS4Q8N2W9 510 aaPredicted RBP10.83□□□□□ -0.67
LINC01940-201ENST00000455228 LRRN4CLQ8ND94 238 aa10.83□□□□□ -0.67
LINC01940-201ENST00000455228 NEK9Q8TD19 979 aa10.83□□□□□ -0.67
LINC01940-201ENST00000455228 JAKMIP2Q96AA8 810 aa10.83□□□□□ -0.67
LINC01940-201ENST00000455228 DDX25Q9UHL0 483 aaKnown RBP10.83□□□□□ -0.67
LINC01940-201ENST00000455228 GOLGA8BA8MQT2 603 aa10.83□□□□□ -0.68
LINC01940-201ENST00000455228 CBFA2T2O43439 604 aa10.83□□□□□ -0.68
LINC01940-201ENST00000455228 YEATS4O95619 227 aa10.83□□□□□ -0.68
LINC01940-201ENST00000455228 USP11P51784 963 aa10.83□□□□□ -0.68
LINC01940-201ENST00000455228 SESN3P58005 492 aa10.83□□□□□ -0.68
LINC01940-201ENST00000455228 HAND2P61296 217 aa10.83□□□□□ -0.68
LINC01940-201ENST00000455228 TIMM10P62072 90 aa10.83□□□□□ -0.68
LINC01940-201ENST00000455228 WASHC4Q2M389 1173 aa10.83□□□□□ -0.68
LINC01940-201ENST00000455228 ARMC3Q5W041 872 aa10.83□□□□□ -0.68
LINC01940-201ENST00000455228 CLEC4GQ6UXB4 293 aa10.83□□□□□ -0.68
LINC01940-201ENST00000455228 CEP112Q8N8E3 955 aa10.83□□□□□ -0.68
LINC01940-201ENST00000455228 PPP1R14BQ96C90 147 aa10.83□□□□□ -0.68
LINC01940-201ENST00000455228 CCDC34Q96HJ3 373 aa10.83□□□□□ -0.68
LINC01940-201ENST00000455228 BPIFA3Q9BQP9 254 aa10.83□□□□□ -0.68
LINC01940-201ENST00000455228 BRD8Q9H0E9 1235 aa10.83□□□□□ -0.68
LINC01940-201ENST00000455228 SENP2Q9HC62 589 aa10.83□□□□□ -0.68
LINC01940-201ENST00000455228 SLC39A2Q9NP94 309 aa10.83□□□□□ -0.68
LINC01940-201ENST00000455228 FAM169AQ9Y6X4 670 aa10.83□□□□□ -0.68
LINC01940-201ENST00000455228 KDM3BQ7LBC6 1761 aa10.83□□□□□ -0.68
LINC01940-201ENST00000455228 MARCKSP29966 332 aaPredicted RBP10.83□□□□□ -0.68
LINC01940-201ENST00000455228 SLC7A5Q01650 507 aa10.83□□□□□ -0.68
LINC01940-201ENST00000455228 DRP2Q13474 957 aa10.83□□□□□ -0.68
LINC01940-201ENST00000455228 KCNB1Q14721 858 aa10.83□□□□□ -0.68
LINC01940-201ENST00000455228 C16orf87Q6PH81 154 aa10.83□□□□□ -0.68
LINC01940-201ENST00000455228 CUL5Q93034 780 aa10.83□□□□□ -0.68
LINC01940-201ENST00000455228 GORASP1Q9BQQ3 440 aa10.83□□□□□ -0.68
LINC01940-201ENST00000455228 NCAPD2Q15021 1401 aa10.83□□□□□ -0.68
LINC01940-201ENST00000455228 MED1Q15648 1581 aaPredicted RBP10.83□□□□□ -0.68
LINC01940-201ENST00000455228 A0A0G2JLW4 131 aa10.82□□□□□ -0.68
LINC01940-201ENST00000455228 SHTN1A0MZ66 631 aa10.82□□□□□ -0.68
LINC01940-201ENST00000455228 RAD21O60216 631 aa10.82□□□□□ -0.68
LINC01940-201ENST00000455228 IFIT1P09914 478 aaKnown RBP10.82□□□□□ -0.68
LINC01940-201ENST00000455228 TOP1P11387 765 aaKnown RBP10.82□□□□□ -0.68
LINC01940-201ENST00000455228 FKBP4Q02790 459 aaKnown RBP eCLIP10.82□□□□□ -0.68
LINC01940-201ENST00000455228 SLC30A9Q6PML9 568 aa10.82□□□□□ -0.68
LINC01940-201ENST00000455228 FAM81BQ96LP2 452 aa10.82□□□□□ -0.68
LINC01940-201ENST00000455228 KLF18A0A0U1RQI7 1052 aa10.82□□□□□ -0.68
LINC01940-201ENST00000455228 ABLIM1O14639 778 aa10.82□□□□□ -0.68
LINC01940-201ENST00000455228 ATP1A3P13637 1013 aa10.82□□□□□ -0.68
LINC01940-201ENST00000455228 SYKP43405 635 aa10.82□□□□□ -0.68
LINC01940-201ENST00000455228 RFX5P48382 616 aaPredicted RBP10.82□□□□□ -0.68
LINC01940-201ENST00000455228 MPP3Q13368 585 aa10.82□□□□□ -0.68
LINC01940-201ENST00000455228 RRP12Q5JTH9 1297 aaKnown RBP10.82□□□□□ -0.68
LINC01940-201ENST00000455228 OLFM4Q6UX06 510 aa10.82□□□□□ -0.68
LINC01940-201ENST00000455228 RALYLQ86SE5 291 aaKnown RBP10.82□□□□□ -0.68
LINC01940-201ENST00000455228 RAPGEF4Q8WZA2 1011 aa10.82□□□□□ -0.68
LINC01940-201ENST00000455228 POLR3EQ9NVU0 708 aa10.82□□□□□ -0.68
LINC01940-201ENST00000455228 ITGB1BP2Q9UKP3 347 aa10.82□□□□□ -0.68
LINC01940-201ENST00000455228 ZSCAN12O43309 604 aa10.82□□□□□ -0.68
LINC01940-201ENST00000455228 PRPF6O94906 941 aaKnown RBP10.82□□□□□ -0.68
LINC01940-201ENST00000455228 GCP02774 474 aa10.82□□□□□ -0.68
LINC01940-201ENST00000455228 FDPSP14324 419 aaKnown RBP10.82□□□□□ -0.68
LINC01940-201ENST00000455228 PFKFB1P16118 471 aa10.82□□□□□ -0.68
LINC01940-201ENST00000455228 PAPOLAP51003 745 aaKnown RBP10.82□□□□□ -0.68
LINC01940-201ENST00000455228 IMMTQ16891 758 aaKnown RBP10.82□□□□□ -0.68
LINC01940-201ENST00000455228 FAM228AQ86W67 206 aa10.82□□□□□ -0.68
LINC01940-201ENST00000455228 PDILTQ8N807 584 aa10.82□□□□□ -0.68
LINC01940-201ENST00000455228 ANKK1Q8NFD2 765 aa10.82□□□□□ -0.68
LINC01940-201ENST00000455228 CARD6Q9BX69 1037 aa10.82□□□□□ -0.68
LINC01940-201ENST00000455228 VIPAS39Q9H9C1 493 aa10.82□□□□□ -0.68
LINC01940-201ENST00000455228 CD248Q9HCU0 757 aa10.82□□□□□ -0.68
LINC01940-201ENST00000455228 GPHNQ9NQX3 736 aaPredicted RBP10.82□□□□□ -0.68
LINC01940-201ENST00000455228 TBC1D7Q9P0N9 293 aa10.82□□□□□ -0.68
LINC01940-201ENST00000455228 HEG1Q9ULI3 1381 aa10.82□□□□□ -0.68
LINC01940-201ENST00000455228 PXDNQ92626 1479 aa10.82□□□□□ -0.68
LINC01940-201ENST00000455228 SALL1Q9NSC2 1324 aa10.81□□□□□ -0.68
LINC01940-201ENST00000455228 RNF113AO15541 343 aaKnown RBP10.81□□□□□ -0.68
LINC01940-201ENST00000455228 PRPF4BQ13523 1007 aaKnown RBP10.81□□□□□ -0.68
LINC01940-201ENST00000455228 ZMYM1Q5SVZ6 1142 aa10.81□□□□□ -0.68
LINC01940-201ENST00000455228 ANO1Q5XXA6 986 aa10.81□□□□□ -0.68
LINC01940-201ENST00000455228 AGXT2Q9BYV1 514 aa10.81□□□□□ -0.68
LINC01940-201ENST00000455228 CLNS1AP54105 237 aaKnown RBP10.81□□□□□ -0.68
LINC01940-201ENST00000455228 ARFGAP3Q9NP61 516 aa10.81□□□□□ -0.68
LINC01940-201ENST00000455228 GJB4Q9NTQ9 266 aa10.81□□□□□ -0.68
LINC01940-201ENST00000455228 MAPK8IP1Q9UQF2 711 aa10.81□□□□□ -0.68
LINC01940-201ENST00000455228 BBOX1O75936 387 aa10.81□□□□□ -0.68
LINC01940-201ENST00000455228 CMA1P23946 247 aa10.81□□□□□ -0.68
LINC01940-201ENST00000455228 MYL5Q02045 173 aa10.81□□□□□ -0.68
LINC01940-201ENST00000455228 LRRFIP1Q32MZ4 808 aaKnown RBP10.81□□□□□ -0.68
LINC01940-201ENST00000455228 LZICQ8WZA0 190 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms