RNA–Protein interactions for RNA: ENST00000454849.5

MSH2-203, Transcript of mutS homolog 2, humanhuman

TSL 4

Gene MSH2, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-203ENST00000454849 TTC22Q5TAA0 569 aa29.6■■■□□ 2.33
MSH2-203ENST00000454849 ARMC5Q96C12 935 aa29.6■■■□□ 2.33
MSH2-203ENST00000454849 VCPKMTQ9H867 229 aa29.6■■■□□ 2.33
MSH2-203ENST00000454849 MORF4L1Q9UBU8 362 aa29.6■■■□□ 2.33
MSH2-203ENST00000454849 CCDC171Q6TFL3 1326 aa29.6■■■□□ 2.33
MSH2-203ENST00000454849 FGAP02671 866 aa29.59■■■□□ 2.33
MSH2-203ENST00000454849 SLC3A2P08195 630 aaKnown RBP29.59■■■□□ 2.33
MSH2-203ENST00000454849 PRMT2P55345 433 aa29.59■■■□□ 2.33
MSH2-203ENST00000454849 PDE4BQ07343 736 aa29.59■■■□□ 2.33
MSH2-203ENST00000454849 SKAP1Q86WV1 359 aa29.59■■■□□ 2.33
MSH2-203ENST00000454849 COA7Q96BR5 231 aa29.59■■■□□ 2.33
MSH2-203ENST00000454849 MGAMO43451 1857 aa29.59■■■□□ 2.33
MSH2-203ENST00000454849 CNMDO75829 334 aa29.58■■■□□ 2.33
MSH2-203ENST00000454849 HAND2P61296 217 aa29.58■■■□□ 2.33
MSH2-203ENST00000454849 ERVK-9P63128 1117 aa29.58■■■□□ 2.33
MSH2-203ENST00000454849 ERVK-24P63145 666 aa29.58■■■□□ 2.33
MSH2-203ENST00000454849 TFAP4Q01664 338 aa29.58■■■□□ 2.33
MSH2-203ENST00000454849 ZNF333Q96JL9 665 aa29.58■■■□□ 2.33
MSH2-203ENST00000454849 SH2D4AQ9H788 454 aa29.58■■■□□ 2.33
MSH2-203ENST00000454849 ZNF287Q9HBT7 754 aa29.58■■■□□ 2.33
MSH2-203ENST00000454849 CLIP2Q9UDT6 1046 aa29.58■■■□□ 2.33
MSH2-203ENST00000454849 CENPFP49454 3210 aa29.57■■■□□ 2.32
MSH2-203ENST00000454849 POTEFA5A3E0 1075 aa29.57■■■□□ 2.32
MSH2-203ENST00000454849 SPDYE16A6NNV3 312 aaPredicted RBP29.57■■■□□ 2.32
MSH2-203ENST00000454849 ELNP15502 786 aa29.57■■■□□ 2.32
MSH2-203ENST00000454849 ALX1Q15699 326 aa29.57■■■□□ 2.32
MSH2-203ENST00000454849 NBPF11Q86T75 865 aa29.57■■■□□ 2.32
MSH2-203ENST00000454849 CHMP4CQ96CF2 233 aa29.57■■■□□ 2.32
MSH2-203ENST00000454849 PORCNQ9H237 461 aa29.57■■■□□ 2.32
MSH2-203ENST00000454849 BTBD7Q9P203 1132 aa29.57■■■□□ 2.32
MSH2-203ENST00000454849 BIN2Q9UBW5 565 aaPredicted RBP29.57■■■□□ 2.32
MSH2-203ENST00000454849 DOCK3Q8IZD9 2030 aa29.56■■■□□ 2.32
MSH2-203ENST00000454849 TSPY3P0CV98 308 aa29.56■■■□□ 2.32
MSH2-203ENST00000454849 TSPY8P0CW00 308 aa29.56■■■□□ 2.32
MSH2-203ENST00000454849 GRK4P32298 578 aa29.56■■■□□ 2.32
MSH2-203ENST00000454849 TICAM2Q86XR7 235 aa29.56■■■□□ 2.32
MSH2-203ENST00000454849 CEP95Q96GE4 821 aa29.56■■■□□ 2.32
MSH2-203ENST00000454849 IGKV6D-41A0A0C4DH26 115 aa29.55■■■□□ 2.32
MSH2-203ENST00000454849 COG2Q14746 738 aa29.55■■■□□ 2.32
MSH2-203ENST00000454849 NUP88Q99567 741 aaPredicted RBP29.55■■■□□ 2.32
MSH2-203ENST00000454849 ADCY3O60266 1144 aa29.54■■■□□ 2.32
MSH2-203ENST00000454849 FLOT1O75955 427 aa29.54■■■□□ 2.32
MSH2-203ENST00000454849 RGS19P49795 217 aa29.54■■■□□ 2.32
MSH2-203ENST00000454849 MTFR1Q15390 333 aa29.54■■■□□ 2.32
MSH2-203ENST00000454849 CCAR1Q8IX12 1150 aaKnown RBP29.54■■■□□ 2.32
MSH2-203ENST00000454849 LPAR1Q92633 364 aa29.54■■■□□ 2.32
MSH2-203ENST00000454849 GOPCQ9HD26 462 aa29.54■■■□□ 2.32
MSH2-203ENST00000454849 TOMM22Q9NS69 142 aa29.54■■■□□ 2.32
MSH2-203ENST00000454849 FBXO28Q9NVF7 368 aa29.54■■■□□ 2.32
MSH2-203ENST00000454849 NYAP2Q9P242 653 aa29.54■■■□□ 2.32
MSH2-203ENST00000454849 DDX52Q9Y2R4 599 aaKnown RBP eCLIP29.54■■■□□ 2.32
MSH2-203ENST00000454849 RABGAP1Q9Y3P9 1069 aa29.54■■■□□ 2.32
MSH2-203ENST00000454849 RRP12Q5JTH9 1297 aaKnown RBP29.53■■■□□ 2.32
MSH2-203ENST00000454849 FAM83BQ5T0W9 1011 aa29.53■■■□□ 2.32
MSH2-203ENST00000454849 WDR78Q5VTH9 848 aa29.53■■■□□ 2.32
MSH2-203ENST00000454849 LRRC47Q8N1G4 583 aaKnown RBP29.53■■■□□ 2.32
MSH2-203ENST00000454849 NEDD1Q8NHV4 660 aa29.53■■■□□ 2.32
MSH2-203ENST00000454849 GTF3C2Q8WUA4 911 aaPredicted RBP29.53■■■□□ 2.32
MSH2-203ENST00000454849 IL25Q9H293 177 aa29.53■■■□□ 2.32
MSH2-203ENST00000454849 MTMR4Q9NYA4 1195 aa29.53■■■□□ 2.32
MSH2-203ENST00000454849 RANBP6O60518 1105 aaKnown RBP29.52■■■□□ 2.32
MSH2-203ENST00000454849 NMT2O60551 498 aa29.52■■■□□ 2.32
MSH2-203ENST00000454849 ATG4CQ96DT6 458 aa29.52■■■□□ 2.32
MSH2-203ENST00000454849 ANAPC4Q9UJX5 808 aa29.52■■■□□ 2.32
MSH2-203ENST00000454849 GJD2Q9UKL4 321 aa29.52■■■□□ 2.32
MSH2-203ENST00000454849 HIP1O00291 1037 aa29.51■■■□□ 2.31
MSH2-203ENST00000454849 MFAP1P55081 439 aaKnown RBP29.51■■■□□ 2.31
MSH2-203ENST00000454849 MLLT1Q03111 559 aaPredicted RBP29.51■■■□□ 2.31
MSH2-203ENST00000454849 CWC22Q9HCG8 908 aaKnown RBP29.51■■■□□ 2.31
MSH2-203ENST00000454849 HOXC10Q9NYD6 342 aa29.51■■■□□ 2.31
MSH2-203ENST00000454849 GREB1LQ9C091 1923 aaPredicted RBP29.51■■■□□ 2.31
MSH2-203ENST00000454849 TSPY2A6NKD2 308 aa29.5■■■□□ 2.31
MSH2-203ENST00000454849 F5H6K3 240 aa29.5■■■□□ 2.31
MSH2-203ENST00000454849 WDR46O15213 610 aaKnown RBP29.5■■■□□ 2.31
MSH2-203ENST00000454849 NDUFB10O96000 172 aa29.5■■■□□ 2.31
MSH2-203ENST00000454849 EN2P19622 333 aaPredicted RBP29.5■■■□□ 2.31
MSH2-203ENST00000454849 DSG3P32926 999 aa29.5■■■□□ 2.31
MSH2-203ENST00000454849 KLRC3Q07444 240 aa29.5■■■□□ 2.31
MSH2-203ENST00000454849 TMEM106CQ9BVX2 250 aa29.5■■■□□ 2.31
MSH2-203ENST00000454849 NBPF3Q9H094 633 aa29.5■■■□□ 2.31
MSH2-203ENST00000454849 KIAA0100Q14667 2235 aaKnown RBP29.5■■■□□ 2.31
MSH2-203ENST00000454849 CYP2B6P20813 491 aa29.49■■■□□ 2.31
MSH2-203ENST00000454849 MAPK4P31152 587 aa29.49■■■□□ 2.31
MSH2-203ENST00000454849 PLS1Q14651 629 aa29.49■■■□□ 2.31
MSH2-203ENST00000454849 GPR142Q7Z601 462 aa29.49■■■□□ 2.31
MSH2-203ENST00000454849 TTLL1O95922 423 aa29.48■■■□□ 2.31
MSH2-203ENST00000454849 LBX2Q6XYB7 198 aa29.48■■■□□ 2.31
MSH2-203ENST00000454849 PLEKHH3Q7Z736 793 aa29.48■■■□□ 2.31
MSH2-203ENST00000454849 TBC1D10CQ8IV04 446 aa29.48■■■□□ 2.31
MSH2-203ENST00000454849 SLAIN1Q8ND83 568 aa29.48■■■□□ 2.31
MSH2-203ENST00000454849 NKX2-3Q8TAU0 364 aa29.48■■■□□ 2.31
MSH2-203ENST00000454849 IL17RBQ9NRM6 502 aa29.48■■■□□ 2.31
MSH2-203ENST00000454849 IRF5Q13568 498 aa29.47■■■□□ 2.31
MSH2-203ENST00000454849 INHAP05111 366 aa29.46■■■□□ 2.31
MSH2-203ENST00000454849 CCNA1P78396 465 aa29.46■■■□□ 2.31
MSH2-203ENST00000454849 CENPQQ7L2Z9 268 aaPredicted RBP29.46■■■□□ 2.31
MSH2-203ENST00000454849 MOV10L1Q9BXT6 1211 aaKnown RBP29.46■■■□□ 2.31
MSH2-203ENST00000454849 ISY1Q9ULR0 285 aaKnown RBP29.46■■■□□ 2.31
MSH2-203ENST00000454849 STX8Q9UNK0 236 aa29.46■■■□□ 2.31
MSH2-203ENST00000454849 MTMR7Q9Y216 660 aa29.46■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms