RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 USP17L11C9JVI0 530 aa16.81■□□□□ 0.28
HDAC4-205ENST00000454542 USP17L18D6R9N7 530 aa16.81■□□□□ 0.28
HDAC4-205ENST00000454542 USP17L22D6RA61 530 aa16.81■□□□□ 0.28
HDAC4-205ENST00000454542 USP17L17D6RBQ6 530 aa16.81■□□□□ 0.28
HDAC4-205ENST00000454542 USP17L19D6RCP7 530 aa16.81■□□□□ 0.28
HDAC4-205ENST00000454542 USP17L20D6RJB6 530 aa16.81■□□□□ 0.28
HDAC4-205ENST00000454542 WDR46O15213 610 aaKnown RBP16.81■□□□□ 0.28
HDAC4-205ENST00000454542 NT5C2P49902 561 aa16.81■□□□□ 0.28
HDAC4-205ENST00000454542 USP17L24Q0WX57 530 aa16.81■□□□□ 0.28
HDAC4-205ENST00000454542 MKL1Q969V6 931 aa16.81■□□□□ 0.28
HDAC4-205ENST00000454542 ARHGAP39Q9C0H5 1083 aa16.81■□□□□ 0.28
HDAC4-205ENST00000454542 RPAP3Q9H6T3 665 aaPredicted RBP16.81■□□□□ 0.28
HDAC4-205ENST00000454542 INCENPQ9NQS7 918 aa16.81■□□□□ 0.28
HDAC4-205ENST00000454542 PLXNB2O15031 1838 aa16.8■□□□□ 0.28
HDAC4-205ENST00000454542 NEDD4P46934 1319 aa16.8■□□□□ 0.28
HDAC4-205ENST00000454542 MYPNQ86TC9 1320 aa16.8■□□□□ 0.28
HDAC4-205ENST00000454542 TSPY3P0CV98 308 aa16.8■□□□□ 0.28
HDAC4-205ENST00000454542 TSPY8P0CW00 308 aa16.8■□□□□ 0.28
HDAC4-205ENST00000454542 HAND2P61296 217 aa16.8■□□□□ 0.28
HDAC4-205ENST00000454542 TFAP4Q01664 338 aa16.8■□□□□ 0.28
HDAC4-205ENST00000454542 FAM47AQ5JRC9 791 aa16.8■□□□□ 0.28
HDAC4-205ENST00000454542 AKNAD1Q5T1N1 836 aa16.8■□□□□ 0.28
HDAC4-205ENST00000454542 FBXO46Q6PJ61 603 aaPredicted RBP16.8■□□□□ 0.28
HDAC4-205ENST00000454542 P2RX7Q99572 595 aaKnown RBP16.8■□□□□ 0.28
HDAC4-205ENST00000454542 EFCC1Q9HA90 598 aa16.8■□□□□ 0.28
HDAC4-205ENST00000454542 TRIM17Q9Y577 477 aa16.8■□□□□ 0.28
HDAC4-205ENST00000454542 SPDYE16A6NNV3 312 aaPredicted RBP16.79■□□□□ 0.28
HDAC4-205ENST00000454542 TTLL1O95922 423 aa16.79■□□□□ 0.28
HDAC4-205ENST00000454542 GNRH1P01148 92 aa16.79■□□□□ 0.28
HDAC4-205ENST00000454542 ANKRD13CQ8N6S4 541 aa16.79■□□□□ 0.28
HDAC4-205ENST00000454542 NKX2-3Q8TAU0 364 aa16.79■□□□□ 0.28
HDAC4-205ENST00000454542 TRIM47Q96LD4 638 aa16.79■□□□□ 0.28
HDAC4-205ENST00000454542 ESYT1Q9BSJ8 1104 aa16.79■□□□□ 0.28
HDAC4-205ENST00000454542 RNF41Q9H4P4 317 aaPredicted RBP16.79■□□□□ 0.28
HDAC4-205ENST00000454542 GOPCQ9HD26 462 aa16.79■□□□□ 0.28
HDAC4-205ENST00000454542 TXNRD2Q9NNW7 524 aa16.79■□□□□ 0.28
HDAC4-205ENST00000454542 IL17RBQ9NRM6 502 aa16.79■□□□□ 0.28
HDAC4-205ENST00000454542 ZNF236Q9UL36 1845 aa16.79■□□□□ 0.28
HDAC4-205ENST00000454542 TSPY2A6NKD2 308 aa16.78■□□□□ 0.28
HDAC4-205ENST00000454542 ZNF213O14771 459 aa16.78■□□□□ 0.28
HDAC4-205ENST00000454542 CNMDO75829 334 aa16.78■□□□□ 0.28
HDAC4-205ENST00000454542 PTH1RQ03431 593 aa16.78■□□□□ 0.28
HDAC4-205ENST00000454542 PPP4R3BQ5MIZ7 849 aa16.78■□□□□ 0.28
HDAC4-205ENST00000454542 GMCL1P1Q8NEA9 526 aa16.78■□□□□ 0.28
HDAC4-205ENST00000454542 ABHD8Q96I13 439 aa16.78■□□□□ 0.28
HDAC4-205ENST00000454542 TCP11L1Q9NUJ3 509 aa16.78■□□□□ 0.28
HDAC4-205ENST00000454542 CTNNA3Q9UI47 895 aa16.78■□□□□ 0.28
HDAC4-205ENST00000454542 PTPN22Q9Y2R2 807 aa16.78■□□□□ 0.28
HDAC4-205ENST00000454542 COL11A1P12107 1806 aaPredicted RBP16.77■□□□□ 0.28
HDAC4-205ENST00000454542 RBBP6Q7Z6E9 1792 aaKnown RBP16.77■□□□□ 0.28
HDAC4-205ENST00000454542 NDUFB10O96000 172 aa16.77■□□□□ 0.28
HDAC4-205ENST00000454542 PSMC4P43686 418 aa16.77■□□□□ 0.28
HDAC4-205ENST00000454542 PRMT2P55345 433 aa16.77■□□□□ 0.28
HDAC4-205ENST00000454542 ATP2B2Q01814 1243 aa16.77■□□□□ 0.28
HDAC4-205ENST00000454542 KIF22Q14807 665 aa16.77■□□□□ 0.28
HDAC4-205ENST00000454542 ARHGEF6Q15052 776 aa16.77■□□□□ 0.28
HDAC4-205ENST00000454542 IMMTQ16891 758 aaKnown RBP16.77■□□□□ 0.28
HDAC4-205ENST00000454542 MFSD6Q6ZSS7 791 aa16.77■□□□□ 0.28
HDAC4-205ENST00000454542 SPICE1Q8N0Z3 855 aa16.77■□□□□ 0.28
HDAC4-205ENST00000454542 LSG1Q9H089 658 aaKnown RBP16.77■□□□□ 0.28
HDAC4-205ENST00000454542 RBPJLQ9UBG7 517 aa16.77■□□□□ 0.28
HDAC4-205ENST00000454542 RABGAP1Q9Y3P9 1069 aa16.77■□□□□ 0.28
HDAC4-205ENST00000454542 RANBP6O60518 1105 aaKnown RBP16.76■□□□□ 0.27
HDAC4-205ENST00000454542 FCGRTP55899 365 aa16.76■□□□□ 0.27
HDAC4-205ENST00000454542 ERVK-9P63128 1117 aa16.76■□□□□ 0.27
HDAC4-205ENST00000454542 ERVK-24P63145 666 aa16.76■□□□□ 0.27
HDAC4-205ENST00000454542 LRRC47Q8N1G4 583 aaKnown RBP16.76■□□□□ 0.27
HDAC4-205ENST00000454542 MAP4K1Q92918 833 aa16.76■□□□□ 0.27
HDAC4-205ENST00000454542 CLIP2Q9UDT6 1046 aa16.76■□□□□ 0.27
HDAC4-205ENST00000454542 SRRDQ9UH36 339 aa16.76■□□□□ 0.27
HDAC4-205ENST00000454542 HPS5Q9UPZ3 1129 aa16.76■□□□□ 0.27
HDAC4-205ENST00000454542 U3KPZ7 1027 aaPredicted RBP16.76■□□□□ 0.27
HDAC4-205ENST00000454542 F5H6K3 240 aa16.75■□□□□ 0.27
HDAC4-205ENST00000454542 NMT2O60551 498 aa16.75■□□□□ 0.27
HDAC4-205ENST00000454542 CDC45O75419 566 aa16.75■□□□□ 0.27
HDAC4-205ENST00000454542 CYP21A2P08686 494 aa16.75■□□□□ 0.27
HDAC4-205ENST00000454542 DSG3P32926 999 aa16.75■□□□□ 0.27
HDAC4-205ENST00000454542 KLRC3Q07444 240 aa16.75■□□□□ 0.27
HDAC4-205ENST00000454542 COG2Q14746 738 aa16.75■□□□□ 0.27
HDAC4-205ENST00000454542 TANGO6Q9C0B7 1094 aa16.75■□□□□ 0.27
HDAC4-205ENST00000454542 ADAMTS5Q9UNA0 930 aa16.75■□□□□ 0.27
HDAC4-205ENST00000454542 PEX10O60683 326 aa16.74■□□□□ 0.27
HDAC4-205ENST00000454542 RRP12Q5JTH9 1297 aaKnown RBP16.74■□□□□ 0.27
HDAC4-205ENST00000454542 FAM83BQ5T0W9 1011 aa16.74■□□□□ 0.27
HDAC4-205ENST00000454542 RCSD1Q6JBY9 416 aa16.74■□□□□ 0.27
HDAC4-205ENST00000454542 GPRC5AQ8NFJ5 357 aa16.74■□□□□ 0.27
HDAC4-205ENST00000454542 ESR2Q92731 530 aa16.74■□□□□ 0.27
HDAC4-205ENST00000454542 GMCL1Q96IK5 515 aa16.74■□□□□ 0.27
HDAC4-205ENST00000454542 BTBD7Q9P203 1132 aa16.74■□□□□ 0.27
HDAC4-205ENST00000454542 PPP1R9AQ9ULJ8 1098 aa16.74■□□□□ 0.27
HDAC4-205ENST00000454542 PTCH2Q9Y6C5 1203 aa16.74■□□□□ 0.27
HDAC4-205ENST00000454542 DOCK3Q8IZD9 2030 aa16.74■□□□□ 0.27
HDAC4-205ENST00000454542 FLOT1O75955 427 aa16.73■□□□□ 0.27
HDAC4-205ENST00000454542 PRKCZQ05513 592 aa16.73■□□□□ 0.27
HDAC4-205ENST00000454542 Q3C1V9 767 aa16.73■□□□□ 0.27
HDAC4-205ENST00000454542 MB21D1Q8N884 522 aa16.73■□□□□ 0.27
HDAC4-205ENST00000454542 REPS2Q8NFH8 660 aa16.73■□□□□ 0.27
HDAC4-205ENST00000454542 ARMC5Q96C12 935 aa16.73■□□□□ 0.27
HDAC4-205ENST00000454542 ATG4CQ96DT6 458 aa16.73■□□□□ 0.27
HDAC4-205ENST00000454542 CNNM2Q9H8M5 875 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms