RNA–Protein interactions for RNA: ENST00000453580.1

TNFRSF4-202, Transcript of TNF receptor superfamily member 4, humanhuman

TSL 3

Gene TNFRSF4, Length 393 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-202ENST00000453580 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.43■□□□□ 0.86
TNFRSF4-202ENST00000453580 VCPKMTQ9H867 229 aa20.43■□□□□ 0.86
TNFRSF4-202ENST00000453580 GOPCQ9HD26 462 aa20.43■□□□□ 0.86
TNFRSF4-202ENST00000453580 PLXNB2O15031 1838 aa20.42■□□□□ 0.86
TNFRSF4-202ENST00000453580 SLC15A5A6NIM6 579 aa20.42■□□□□ 0.86
TNFRSF4-202ENST00000453580 SPDYE16A6NNV3 312 aaPredicted RBP20.42■□□□□ 0.86
TNFRSF4-202ENST00000453580 GSG1L2A8MUP6 293 aa20.42■□□□□ 0.86
TNFRSF4-202ENST00000453580 WDR46O15213 610 aaKnown RBP20.42■□□□□ 0.86
TNFRSF4-202ENST00000453580 GPAA1O43292 621 aa20.42■□□□□ 0.86
TNFRSF4-202ENST00000453580 STRNO43815 780 aa20.42■□□□□ 0.86
TNFRSF4-202ENST00000453580 SLC3A2P08195 630 aaKnown RBP20.42■□□□□ 0.86
TNFRSF4-202ENST00000453580 TDO2P48775 406 aa20.42■□□□□ 0.86
TNFRSF4-202ENST00000453580 ANKRD45Q5TZF3 282 aa20.42■□□□□ 0.86
TNFRSF4-202ENST00000453580 OSBP2Q969R2 916 aa20.42■□□□□ 0.86
TNFRSF4-202ENST00000453580 A0A1W2PRG0 241 aa20.41■□□□□ 0.86
TNFRSF4-202ENST00000453580 PATL2C9JE40 543 aaKnown RBP20.41■□□□□ 0.86
TNFRSF4-202ENST00000453580 MORN1Q5T089 497 aa20.41■□□□□ 0.86
TNFRSF4-202ENST00000453580 WDR78Q5VTH9 848 aa20.41■□□□□ 0.86
TNFRSF4-202ENST00000453580 TSHZ3Q63HK5 1081 aa20.41■□□□□ 0.86
TNFRSF4-202ENST00000453580 PI4K2BQ8TCG2 481 aa20.41■□□□□ 0.86
TNFRSF4-202ENST00000453580 DPF3Q92784 378 aa20.41■□□□□ 0.86
TNFRSF4-202ENST00000453580 PORCNQ9H237 461 aa20.41■□□□□ 0.86
TNFRSF4-202ENST00000453580 NR2E3Q9Y5X4 410 aa20.41■□□□□ 0.86
TNFRSF4-202ENST00000453580 ROBO3Q96MS0 1386 aa20.41■□□□□ 0.86
TNFRSF4-202ENST00000453580 CYP2D7A0A087X1C5 515 aa20.4■□□□□ 0.86
TNFRSF4-202ENST00000453580 MINDY4BA8MYZ0 360 aa20.4■□□□□ 0.86
TNFRSF4-202ENST00000453580 FLOT1O75955 427 aa20.4■□□□□ 0.86
TNFRSF4-202ENST00000453580 CENPFP49454 3210 aa20.4■□□□□ 0.86
TNFRSF4-202ENST00000453580 MAP2K5Q13163 448 aa20.4■□□□□ 0.86
TNFRSF4-202ENST00000453580 ZNF444Q8N0Y2 327 aaPredicted RBP20.4■□□□□ 0.86
TNFRSF4-202ENST00000453580 SHCBP1Q8NEM2 672 aa20.4■□□□□ 0.86
TNFRSF4-202ENST00000453580 TRIB2Q92519 343 aa20.4■□□□□ 0.86
TNFRSF4-202ENST00000453580 USP6NLQ92738 828 aa20.4■□□□□ 0.86
TNFRSF4-202ENST00000453580 CRISPLD2Q9H0B8 497 aa20.4■□□□□ 0.86
TNFRSF4-202ENST00000453580 RWDD1Q9H446 243 aaPredicted RBP20.4■□□□□ 0.86
TNFRSF4-202ENST00000453580 SLC5A4Q9NY91 659 aa20.4■□□□□ 0.86
TNFRSF4-202ENST00000453580 CNMDO75829 334 aa20.39■□□□□ 0.85
TNFRSF4-202ENST00000453580 CHGBP05060 677 aa20.39■□□□□ 0.85
TNFRSF4-202ENST00000453580 EEF2P13639 858 aaKnown RBP20.39■□□□□ 0.85
TNFRSF4-202ENST00000453580 PTPREP23469 700 aa20.39■□□□□ 0.85
TNFRSF4-202ENST00000453580 ATP2B2Q01814 1243 aa20.39■□□□□ 0.85
TNFRSF4-202ENST00000453580 EVX2Q03828 476 aa20.39■□□□□ 0.85
TNFRSF4-202ENST00000453580 PDE4BQ07343 736 aa20.39■□□□□ 0.85
TNFRSF4-202ENST00000453580 PPP4R3BQ5MIZ7 849 aa20.39■□□□□ 0.85
TNFRSF4-202ENST00000453580 UBE2Q1Q7Z7E8 422 aa20.39■□□□□ 0.85
TNFRSF4-202ENST00000453580 EVI5LQ96CN4 794 aa20.39■□□□□ 0.85
TNFRSF4-202ENST00000453580 PRKAR2AP13861 404 aaKnown RBP20.38■□□□□ 0.85
TNFRSF4-202ENST00000453580 DSG3P32926 999 aa20.38■□□□□ 0.85
TNFRSF4-202ENST00000453580 MAP3K21Q5TCX8 1036 aa20.38■□□□□ 0.85
TNFRSF4-202ENST00000453580 MFSD14CQ5VZR4 134 aa20.38■□□□□ 0.85
TNFRSF4-202ENST00000453580 MROH8Q9H579 483 aa20.38■□□□□ 0.85
TNFRSF4-202ENST00000453580 SYNPO2Q9UMS6 1093 aa20.38■□□□□ 0.85
TNFRSF4-202ENST00000453580 SLC34A2O95436 690 aa20.37■□□□□ 0.85
TNFRSF4-202ENST00000453580 HOXC6P09630 235 aa20.37■□□□□ 0.85
TNFRSF4-202ENST00000453580 COPB2P35606 906 aa20.37■□□□□ 0.85
TNFRSF4-202ENST00000453580 ZMYM1Q5SVZ6 1142 aa20.37■□□□□ 0.85
TNFRSF4-202ENST00000453580 NECAB2Q7Z6G3 386 aa20.37■□□□□ 0.85
TNFRSF4-202ENST00000453580 SIAH1Q8IUQ4 282 aa20.37■□□□□ 0.85
TNFRSF4-202ENST00000453580 IFNL3Q8IZI9 196 aa20.37■□□□□ 0.85
TNFRSF4-202ENST00000453580 SPATC1LQ9H0A9 340 aa20.37■□□□□ 0.85
TNFRSF4-202ENST00000453580 NAPBQ9H115 298 aa20.37■□□□□ 0.85
TNFRSF4-202ENST00000453580 BTBD7Q9P203 1132 aa20.37■□□□□ 0.85
TNFRSF4-202ENST00000453580 NYAP2Q9P242 653 aa20.37■□□□□ 0.85
TNFRSF4-202ENST00000453580 STAP2Q9UGK3 403 aa20.37■□□□□ 0.85
TNFRSF4-202ENST00000453580 PEX10O60683 326 aa20.36■□□□□ 0.85
TNFRSF4-202ENST00000453580 SLC25A27O95847 323 aa20.36■□□□□ 0.85
TNFRSF4-202ENST00000453580 RASA1P20936 1047 aa20.36■□□□□ 0.85
TNFRSF4-202ENST00000453580 GRB14Q14449 540 aa20.36■□□□□ 0.85
TNFRSF4-202ENST00000453580 POTEEQ6S8J3 1075 aa20.36■□□□□ 0.85
TNFRSF4-202ENST00000453580 SPICE1Q8N0Z3 855 aa20.36■□□□□ 0.85
TNFRSF4-202ENST00000453580 A0A0G2JMZ2 1700 aa20.36■□□□□ 0.85
TNFRSF4-202ENST00000453580 M0R2C6 588 aa20.35■□□□□ 0.85
TNFRSF4-202ENST00000453580 MSCO60682 206 aa20.35■□□□□ 0.85
TNFRSF4-202ENST00000453580 DPP9Q86TI2 863 aa20.35■□□□□ 0.85
TNFRSF4-202ENST00000453580 ABRAQ8N0Z2 381 aa20.35■□□□□ 0.85
TNFRSF4-202ENST00000453580 MOV10L1Q9BXT6 1211 aaKnown RBP20.35■□□□□ 0.85
TNFRSF4-202ENST00000453580 RLFQ13129 1914 aa20.35■□□□□ 0.85
TNFRSF4-202ENST00000453580 GREB1LQ9C091 1923 aaPredicted RBP20.35■□□□□ 0.85
TNFRSF4-202ENST00000453580 ZNF236Q9UL36 1845 aa20.34■□□□□ 0.85
TNFRSF4-202ENST00000453580 SALL3Q9BXA9 1300 aa20.34■□□□□ 0.85
TNFRSF4-202ENST00000453580 RAD21O60216 631 aa20.34■□□□□ 0.85
TNFRSF4-202ENST00000453580 PDE1AP54750 535 aa20.34■□□□□ 0.85
TNFRSF4-202ENST00000453580 PLS1Q14651 629 aa20.34■□□□□ 0.85
TNFRSF4-202ENST00000453580 OTUD7AQ8TE49 926 aaPredicted RBP20.34■□□□□ 0.85
TNFRSF4-202ENST00000453580 NBPF3Q9H094 633 aa20.34■□□□□ 0.85
TNFRSF4-202ENST00000453580 HELLSQ9NRZ9 838 aa20.34■□□□□ 0.85
TNFRSF4-202ENST00000453580 PARP14Q460N5 1801 aa20.33■□□□□ 0.85
TNFRSF4-202ENST00000453580 EVI5O60447 810 aa20.33■□□□□ 0.85
TNFRSF4-202ENST00000453580 CACNB2Q08289 660 aaPredicted RBP20.33■□□□□ 0.85
TNFRSF4-202ENST00000453580 CLEC10AQ8IUN9 316 aa20.33■□□□□ 0.85
TNFRSF4-202ENST00000453580 EPB41L4AQ9HCS5 686 aaPredicted RBP20.33■□□□□ 0.85
TNFRSF4-202ENST00000453580 OGDHLQ9ULD0 1010 aa20.33■□□□□ 0.85
TNFRSF4-202ENST00000453580 MYH4Q9Y623 1939 aa20.32■□□□□ 0.84
TNFRSF4-202ENST00000453580 TSPY3P0CV98 308 aa20.32■□□□□ 0.84
TNFRSF4-202ENST00000453580 TSPY8P0CW00 308 aa20.32■□□□□ 0.84
TNFRSF4-202ENST00000453580 FCER1AP12319 257 aa20.32■□□□□ 0.84
TNFRSF4-202ENST00000453580 ERCC3P19447 782 aa20.32■□□□□ 0.84
TNFRSF4-202ENST00000453580 NCAPG2Q86XI2 1143 aa20.32■□□□□ 0.84
TNFRSF4-202ENST00000453580 PAWRQ96IZ0 340 aaKnown RBP20.32■□□□□ 0.84
TNFRSF4-202ENST00000453580 ADAMTS5Q9UNA0 930 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms