RNA–Protein interactions for RNA: ENST00000452182.1

SCN9A-204, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-204ENST00000452182 BBXQ8WY36 941 aaPredicted RBP13.61□□□□□ -0.23
SCN9A-204ENST00000452182 OTUD5Q96G74 571 aa13.61□□□□□ -0.23
SCN9A-204ENST00000452182 AGXT2Q9BYV1 514 aa13.61□□□□□ -0.23
SCN9A-204ENST00000452182 KIAA1683Q9H0B3 1180 aa13.61□□□□□ -0.23
SCN9A-204ENST00000452182 ALDH8A1Q9H2A2 487 aaPredicted RBP13.61□□□□□ -0.23
SCN9A-204ENST00000452182 CLIP2Q9UDT6 1046 aa13.61□□□□□ -0.23
SCN9A-204ENST00000452182 A0A1W2PRG0 241 aa13.6□□□□□ -0.23
SCN9A-204ENST00000452182 USP17L10C9JJH3 530 aa13.6□□□□□ -0.23
SCN9A-204ENST00000452182 SH2B2O14492 632 aaPredicted RBP13.6□□□□□ -0.23
SCN9A-204ENST00000452182 SLC10A3P09131 477 aa13.6□□□□□ -0.23
SCN9A-204ENST00000452182 TOP1P11387 765 aaKnown RBP13.6□□□□□ -0.23
SCN9A-204ENST00000452182 USP14P54578 494 aa13.6□□□□□ -0.23
SCN9A-204ENST00000452182 BACE1P56817 501 aa13.6□□□□□ -0.23
SCN9A-204ENST00000452182 SPP2Q13103 211 aa13.6□□□□□ -0.23
SCN9A-204ENST00000452182 GSE1Q14687 1217 aa13.6□□□□□ -0.23
SCN9A-204ENST00000452182 RABEP1Q15276 862 aa13.6□□□□□ -0.23
SCN9A-204ENST00000452182 DEFB115Q30KQ5 88 aa13.6□□□□□ -0.23
SCN9A-204ENST00000452182 SH3D19Q5HYK7 790 aa13.6□□□□□ -0.23
SCN9A-204ENST00000452182 CCDC84Q86UT8 332 aaPredicted RBP13.6□□□□□ -0.23
SCN9A-204ENST00000452182 ACER1Q8TDN7 264 aa13.6□□□□□ -0.23
SCN9A-204ENST00000452182 UPF3BQ9BZI7 483 aaKnown RBP13.6□□□□□ -0.23
SCN9A-204ENST00000452182 FAM155AB1AL88 458 aaPredicted RBP13.59□□□□□ -0.23
SCN9A-204ENST00000452182 CPA1P15085 419 aa13.59□□□□□ -0.23
SCN9A-204ENST00000452182 HSPA6P17066 643 aa13.59□□□□□ -0.23
SCN9A-204ENST00000452182 GJA5P36382 358 aa13.59□□□□□ -0.23
SCN9A-204ENST00000452182 ECE1P42892 770 aa13.59□□□□□ -0.23
SCN9A-204ENST00000452182 WTAPQ15007 396 aa13.59□□□□□ -0.23
SCN9A-204ENST00000452182 TMEM67Q5HYA8 995 aa13.59□□□□□ -0.23
SCN9A-204ENST00000452182 IFIT1BQ5T764 474 aaKnown RBP13.59□□□□□ -0.23
SCN9A-204ENST00000452182 SGMS1Q86VZ5 419 aa13.59□□□□□ -0.23
SCN9A-204ENST00000452182 GMCL1P1Q8NEA9 526 aa13.59□□□□□ -0.23
SCN9A-204ENST00000452182 TMEM47Q9BQJ4 181 aa13.59□□□□□ -0.23
SCN9A-204ENST00000452182 LY9Q9HBG7 655 aa13.59□□□□□ -0.23
SCN9A-204ENST00000452182 LOC285556D6RIA3 1793 aa13.59□□□□□ -0.23
SCN9A-204ENST00000452182 A0A0G2JLL6 359 aaPredicted RBP13.58□□□□□ -0.24
SCN9A-204ENST00000452182 TRIM75PA6NK02 468 aa13.58□□□□□ -0.24
SCN9A-204ENST00000452182 SNAPC2Q13487 334 aa13.58□□□□□ -0.24
SCN9A-204ENST00000452182 MTMR2Q13614 643 aa13.58□□□□□ -0.24
SCN9A-204ENST00000452182 Q6ZUG5 572 aa13.58□□□□□ -0.24
SCN9A-204ENST00000452182 PRRT2Q7Z6L0 340 aaPredicted RBP13.58□□□□□ -0.24
SCN9A-204ENST00000452182 LPAR1Q92633 364 aa13.58□□□□□ -0.24
SCN9A-204ENST00000452182 C12orf42Q96LP6 360 aa13.58□□□□□ -0.24
SCN9A-204ENST00000452182 FEZ1Q99689 392 aa13.58□□□□□ -0.24
SCN9A-204ENST00000452182 PDRG1Q9NUG6 133 aa13.58□□□□□ -0.24
SCN9A-204ENST00000452182 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.58□□□□□ -0.24
SCN9A-204ENST00000452182 NEK4P51957 841 aa13.57□□□□□ -0.24
SCN9A-204ENST00000452182 GTF2A2P52657 109 aa13.57□□□□□ -0.24
SCN9A-204ENST00000452182 EVCP57679 992 aa13.57□□□□□ -0.24
SCN9A-204ENST00000452182 ATP2B2Q01814 1243 aa13.57□□□□□ -0.24
SCN9A-204ENST00000452182 USP17L2Q6R6M4 530 aa13.57□□□□□ -0.24
SCN9A-204ENST00000452182 MS4A4AQ96JQ5 239 aa13.57□□□□□ -0.24
SCN9A-204ENST00000452182 TCEANC2Q96MN5 208 aa13.57□□□□□ -0.24
SCN9A-204ENST00000452182 LRRC2Q9BYS8 371 aa13.57□□□□□ -0.24
SCN9A-204ENST00000452182 VCPKMTQ9H867 229 aa13.57□□□□□ -0.24
SCN9A-204ENST00000452182 KAT14Q9H8E8 782 aa13.57□□□□□ -0.24
SCN9A-204ENST00000452182 GOPCQ9HD26 462 aa13.57□□□□□ -0.24
SCN9A-204ENST00000452182 TESPA1A2RU30 521 aaPredicted RBP13.57□□□□□ -0.24
SCN9A-204ENST00000452182 F5H6K3 240 aa13.57□□□□□ -0.24
SCN9A-204ENST00000452182 NUBP1P53384 320 aa13.57□□□□□ -0.24
SCN9A-204ENST00000452182 FGD1P98174 961 aa13.57□□□□□ -0.24
SCN9A-204ENST00000452182 KLRC3Q07444 240 aa13.57□□□□□ -0.24
SCN9A-204ENST00000452182 ANKRD1Q15327 319 aa13.57□□□□□ -0.24
SCN9A-204ENST00000452182 LRRC47Q8N1G4 583 aaKnown RBP13.57□□□□□ -0.24
SCN9A-204ENST00000452182 PROCA1Q8NCQ7 364 aaPredicted RBP13.57□□□□□ -0.24
SCN9A-204ENST00000452182 PNMA1Q8ND90 353 aa13.57□□□□□ -0.24
SCN9A-204ENST00000452182 SENP2Q9HC62 589 aa13.57□□□□□ -0.24
SCN9A-204ENST00000452182 GPHNQ9NQX3 736 aaPredicted RBP13.57□□□□□ -0.24
SCN9A-204ENST00000452182 EMILIN3Q9NT22 766 aa13.57□□□□□ -0.24
SCN9A-204ENST00000452182 MANSC4A6NHS7 340 aaPredicted RBP13.56□□□□□ -0.24
SCN9A-204ENST00000452182 CETPP11597 493 aa13.56□□□□□ -0.24
SCN9A-204ENST00000452182 RCAN1P53805 252 aa13.56□□□□□ -0.24
SCN9A-204ENST00000452182 HMGCS2P54868 508 aa13.56□□□□□ -0.24
SCN9A-204ENST00000452182 INHBEP58166 350 aa13.56□□□□□ -0.24
SCN9A-204ENST00000452182 NOGQ13253 232 aa13.56□□□□□ -0.24
SCN9A-204ENST00000452182 TOB2Q14106 344 aaPredicted RBP13.56□□□□□ -0.24
SCN9A-204ENST00000452182 CYP4F22Q6NT55 531 aa13.56□□□□□ -0.24
SCN9A-204ENST00000452182 FASTKD5Q7L8L6 764 aaKnown RBP13.56□□□□□ -0.24
SCN9A-204ENST00000452182 BRF1Q92994 677 aa13.56□□□□□ -0.24
SCN9A-204ENST00000452182 GMCL1Q96IK5 515 aa13.56□□□□□ -0.24
SCN9A-204ENST00000452182 CAPNS2Q96L46 248 aa13.56□□□□□ -0.24
SCN9A-204ENST00000452182 TMOD4Q9NZQ9 345 aa13.56□□□□□ -0.24
SCN9A-204ENST00000452182 CCDC69A6NI79 296 aa13.55□□□□□ -0.24
SCN9A-204ENST00000452182 DDAH1O94760 285 aa13.55□□□□□ -0.24
SCN9A-204ENST00000452182 NDUFB10O96000 172 aa13.55□□□□□ -0.24
SCN9A-204ENST00000452182 SNHG28P0DPA3 235 aa13.55□□□□□ -0.24
SCN9A-204ENST00000452182 TROAPQ12815 778 aa13.55□□□□□ -0.24
SCN9A-204ENST00000452182 MOGSQ13724 837 aa13.55□□□□□ -0.24
SCN9A-204ENST00000452182 CATIPQ7Z7H3 387 aa13.55□□□□□ -0.24
SCN9A-204ENST00000452182 MAP3K14Q99558 947 aa13.55□□□□□ -0.24
SCN9A-204ENST00000452182 SLC12A7Q9Y666 1083 aa13.55□□□□□ -0.24
SCN9A-204ENST00000452182 THSD7BQ9C0I4 1608 aa13.55□□□□□ -0.24
SCN9A-204ENST00000452182 WDR46O15213 610 aaKnown RBP13.54□□□□□ -0.24
SCN9A-204ENST00000452182 ST18O60284 1047 aa13.54□□□□□ -0.24
SCN9A-204ENST00000452182 CALM1P0DP23 149 aa13.54□□□□□ -0.24
SCN9A-204ENST00000452182 CALM2P0DP24 149 aa13.54□□□□□ -0.24
SCN9A-204ENST00000452182 CALM3P0DP25 149 aa13.54□□□□□ -0.24
SCN9A-204ENST00000452182 SLFN13Q68D06 897 aa13.54□□□□□ -0.24
SCN9A-204ENST00000452182 APOA5Q6Q788 366 aa13.54□□□□□ -0.24
SCN9A-204ENST00000452182 NFXL1Q6ZNB6 911 aa13.54□□□□□ -0.24
SCN9A-204ENST00000452182 PAXIP1Q6ZW49 1069 aaPredicted RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms