RNA–Protein interactions for RNA: ENST00000452065.5

HDLBP-224, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-224ENST00000452065 VCPKMTQ9H867 229 aa13.13□□□□□ -0.31
HDLBP-224ENST00000452065 CLIP2Q9UDT6 1046 aa13.13□□□□□ -0.31
HDLBP-224ENST00000452065 PCNTO95613 3336 aa13.13□□□□□ -0.31
HDLBP-224ENST00000452065 PDHXO00330 501 aa13.12□□□□□ -0.31
HDLBP-224ENST00000452065 KRT32Q14532 448 aa13.12□□□□□ -0.31
HDLBP-224ENST00000452065 C8orf34Q49A92 452 aa13.12□□□□□ -0.31
HDLBP-224ENST00000452065 RCSD1Q6JBY9 416 aa13.12□□□□□ -0.31
HDLBP-224ENST00000452065 RALYLQ86SE5 291 aaKnown RBP13.12□□□□□ -0.31
HDLBP-224ENST00000452065 CLEC10AQ8IUN9 316 aa13.12□□□□□ -0.31
HDLBP-224ENST00000452065 GMCL1P1Q8NEA9 526 aa13.12□□□□□ -0.31
HDLBP-224ENST00000452065 ZSCAN10Q96SZ4 725 aaPredicted RBP13.12□□□□□ -0.31
HDLBP-224ENST00000452065 MTA3Q9BTC8 594 aa13.12□□□□□ -0.31
HDLBP-224ENST00000452065 GOPCQ9HD26 462 aa13.12□□□□□ -0.31
HDLBP-224ENST00000452065 F5H6K3 240 aa13.11□□□□□ -0.31
HDLBP-224ENST00000452065 NMT2O60551 498 aa13.11□□□□□ -0.31
HDLBP-224ENST00000452065 TRPA1O75762 1119 aa13.11□□□□□ -0.31
HDLBP-224ENST00000452065 TOP1P11387 765 aaKnown RBP13.11□□□□□ -0.31
HDLBP-224ENST00000452065 ATP2B2Q01814 1243 aa13.11□□□□□ -0.31
HDLBP-224ENST00000452065 KLRC3Q07444 240 aa13.11□□□□□ -0.31
HDLBP-224ENST00000452065 NOM1Q5C9Z4 860 aaKnown RBP13.11□□□□□ -0.31
HDLBP-224ENST00000452065 TREML2Q5T2D2 321 aa13.11□□□□□ -0.31
HDLBP-224ENST00000452065 RASEFQ8IZ41 740 aa13.11□□□□□ -0.31
HDLBP-224ENST00000452065 TNS4Q8IZW8 715 aa13.11□□□□□ -0.31
HDLBP-224ENST00000452065 STX8Q9UNK0 236 aa13.11□□□□□ -0.31
HDLBP-224ENST00000452065 USP17L15C9J2P7 530 aa13.1□□□□□ -0.31
HDLBP-224ENST00000452065 USP17L13C9JLJ4 530 aa13.1□□□□□ -0.31
HDLBP-224ENST00000452065 USP17L11C9JVI0 530 aa13.1□□□□□ -0.31
HDLBP-224ENST00000452065 USP17L18D6R9N7 530 aa13.1□□□□□ -0.31
HDLBP-224ENST00000452065 USP17L22D6RA61 530 aa13.1□□□□□ -0.31
HDLBP-224ENST00000452065 USP17L17D6RBQ6 530 aa13.1□□□□□ -0.31
HDLBP-224ENST00000452065 USP17L19D6RCP7 530 aa13.1□□□□□ -0.31
HDLBP-224ENST00000452065 USP17L20D6RJB6 530 aa13.1□□□□□ -0.31
HDLBP-224ENST00000452065 HMGB1P09429 215 aaKnown RBP13.1□□□□□ -0.31
HDLBP-224ENST00000452065 VCAM1P19320 739 aa13.1□□□□□ -0.31
HDLBP-224ENST00000452065 MCM5P33992 734 aa13.1□□□□□ -0.31
HDLBP-224ENST00000452065 USP17L24Q0WX57 530 aa13.1□□□□□ -0.31
HDLBP-224ENST00000452065 DGKZQ13574 1117 aa13.1□□□□□ -0.31
HDLBP-224ENST00000452065 ZYXQ15942 572 aaKnown RBP13.1□□□□□ -0.31
HDLBP-224ENST00000452065 KIAA1755Q5JYT7 1200 aa13.1□□□□□ -0.31
HDLBP-224ENST00000452065 CYB5R4Q7L1T6 521 aa13.1□□□□□ -0.31
HDLBP-224ENST00000452065 MB21D2Q8IYB1 491 aaPredicted RBP13.1□□□□□ -0.31
HDLBP-224ENST00000452065 NEK1Q96PY6 1258 aa13.1□□□□□ -0.31
HDLBP-224ENST00000452065 TMEM47Q9BQJ4 181 aa13.1□□□□□ -0.31
HDLBP-224ENST00000452065 UBAC1Q9BSL1 405 aa13.1□□□□□ -0.31
HDLBP-224ENST00000452065 ZFYVE28Q9HCC9 887 aa13.1□□□□□ -0.31
HDLBP-224ENST00000452065 PNMA3Q9UL41 463 aa13.1□□□□□ -0.31
HDLBP-224ENST00000452065 RLFQ13129 1914 aa13.09□□□□□ -0.31
HDLBP-224ENST00000452065 PARP14Q460N5 1801 aa13.09□□□□□ -0.31
HDLBP-224ENST00000452065 WDR46O15213 610 aaKnown RBP13.09□□□□□ -0.31
HDLBP-224ENST00000452065 TLR2O60603 784 aa13.09□□□□□ -0.31
HDLBP-224ENST00000452065 SEC24BO95487 1268 aa13.09□□□□□ -0.31
HDLBP-224ENST00000452065 OSBPP22059 807 aa13.09□□□□□ -0.31
HDLBP-224ENST00000452065 MCCP23508 829 aa13.09□□□□□ -0.31
HDLBP-224ENST00000452065 SEC23AQ15436 765 aa13.09□□□□□ -0.31
HDLBP-224ENST00000452065 CATSPERGQ6ZRH7 1159 aa13.09□□□□□ -0.31
HDLBP-224ENST00000452065 ENAHQ8N8S7 591 aaPredicted RBP13.09□□□□□ -0.31
HDLBP-224ENST00000452065 IGDCC4Q8TDY8 1250 aa13.09□□□□□ -0.31
HDLBP-224ENST00000452065 GMCL1Q96IK5 515 aa13.09□□□□□ -0.31
HDLBP-224ENST00000452065 PARK7Q99497 189 aaKnown RBP13.09□□□□□ -0.31
HDLBP-224ENST00000452065 ZKSCAN3Q9BRR0 538 aa13.09□□□□□ -0.31
HDLBP-224ENST00000452065 SNX14Q9Y5W7 946 aa13.09□□□□□ -0.31
HDLBP-224ENST00000452065 WDR19Q8NEZ3 1342 aa13.09□□□□□ -0.31
HDLBP-224ENST00000452065 TBC1D8O95759 1140 aa13.08□□□□□ -0.32
HDLBP-224ENST00000452065 NDUFB10O96000 172 aa13.08□□□□□ -0.32
HDLBP-224ENST00000452065 HSPA1AP0DMV8 641 aaKnown RBP13.08□□□□□ -0.32
HDLBP-224ENST00000452065 HSPA1BP0DMV9 641 aaKnown RBP13.08□□□□□ -0.32
HDLBP-224ENST00000452065 ANTXR2P58335 489 aa13.08□□□□□ -0.32
HDLBP-224ENST00000452065 ANAPC15P60006 121 aa13.08□□□□□ -0.32
HDLBP-224ENST00000452065 EXOSC10Q01780 885 aaKnown RBP13.08□□□□□ -0.32
HDLBP-224ENST00000452065 CRHR2Q13324 411 aa13.08□□□□□ -0.32
HDLBP-224ENST00000452065 COG2Q14746 738 aa13.08□□□□□ -0.32
HDLBP-224ENST00000452065 SART3Q15020 963 aaKnown RBP13.08□□□□□ -0.32
HDLBP-224ENST00000452065 TAF1CQ15572 869 aaPredicted RBP13.08□□□□□ -0.32
HDLBP-224ENST00000452065 ADCK5Q3MIX3 580 aa13.08□□□□□ -0.32
HDLBP-224ENST00000452065 SLFN13Q68D06 897 aa13.08□□□□□ -0.32
HDLBP-224ENST00000452065 DHX32Q7L7V1 743 aaKnown RBP13.08□□□□□ -0.32
HDLBP-224ENST00000452065 LRRC47Q8N1G4 583 aaKnown RBP13.08□□□□□ -0.32
HDLBP-224ENST00000452065 TMTC2Q8N394 836 aa13.08□□□□□ -0.32
HDLBP-224ENST00000452065 IL17RAQ96F46 866 aa13.08□□□□□ -0.32
HDLBP-224ENST00000452065 TMEM87BQ96K49 555 aa13.08□□□□□ -0.32
HDLBP-224ENST00000452065 ASCC2Q9H1I8 757 aaPredicted RBP13.08□□□□□ -0.32
HDLBP-224ENST00000452065 RPAP3Q9H6T3 665 aaPredicted RBP13.08□□□□□ -0.32
HDLBP-224ENST00000452065 HOXC10Q9NYD6 342 aa13.08□□□□□ -0.32
HDLBP-224ENST00000452065 TNKSO95271 1327 aa13.08□□□□□ -0.32
HDLBP-224ENST00000452065 ADGRA2Q96PE1 1338 aa13.08□□□□□ -0.32
HDLBP-224ENST00000452065 ERICH2A1L162 156 aa13.07□□□□□ -0.32
HDLBP-224ENST00000452065 IFIT3O14879 490 aaKnown RBP13.07□□□□□ -0.32
HDLBP-224ENST00000452065 PRC1O43663 620 aa13.07□□□□□ -0.32
HDLBP-224ENST00000452065 PSMA5P28066 241 aa13.07□□□□□ -0.32
HDLBP-224ENST00000452065 GCLCP48506 637 aaPredicted RBP13.07□□□□□ -0.32
HDLBP-224ENST00000452065 C17orf99Q6UX52 265 aa13.07□□□□□ -0.32
HDLBP-224ENST00000452065 LBX2Q6XYB7 198 aa13.07□□□□□ -0.32
HDLBP-224ENST00000452065 SPICE1Q8N0Z3 855 aa13.07□□□□□ -0.32
HDLBP-224ENST00000452065 GTF3C2Q8WUA4 911 aaPredicted RBP13.07□□□□□ -0.32
HDLBP-224ENST00000452065 P2RX7Q99572 595 aaKnown RBP13.07□□□□□ -0.32
HDLBP-224ENST00000452065 TM6SF1Q9BZW5 370 aa13.07□□□□□ -0.32
HDLBP-224ENST00000452065 MYPNQ86TC9 1320 aa13.07□□□□□ -0.32
HDLBP-224ENST00000452065 FOXN1O15353 648 aa13.06□□□□□ -0.32
HDLBP-224ENST00000452065 PLA2G6O60733 806 aa13.06□□□□□ -0.32
HDLBP-224ENST00000452065 SNHG28P0DPA3 235 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms