RNA–Protein interactions for RNA: ENST00000451521.6

CCHCR1-208, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCHCR1, Length 2,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-208ENST00000451521 CCDC178Q5BJE1 867 aa17.54■□□□□ 0.4
CCHCR1-208ENST00000451521 MFSD14BQ5SR56 506 aa17.54■□□□□ 0.4
CCHCR1-208ENST00000451521 PLA2G4DQ86XP0 818 aa17.54■□□□□ 0.4
CCHCR1-208ENST00000451521 CTCFLQ8NI51 663 aaPredicted RBP17.54■□□□□ 0.4
CCHCR1-208ENST00000451521 IL17RBQ9NRM6 502 aa17.54■□□□□ 0.4
CCHCR1-208ENST00000451521 KIAA1468Q9P260 1216 aa17.54■□□□□ 0.4
CCHCR1-208ENST00000451521 V9GY48 417 aaPredicted RBP17.54■□□□□ 0.4
CCHCR1-208ENST00000451521 RGPD3A6NKT7 1758 aaPredicted RBP17.54■□□□□ 0.4
CCHCR1-208ENST00000451521 RGPD4Q7Z3J3 1758 aa17.54■□□□□ 0.4
CCHCR1-208ENST00000451521 QSER1Q2KHR3 1735 aa17.53■□□□□ 0.4
CCHCR1-208ENST00000451521 NR5A1Q13285 461 aa17.53■□□□□ 0.4
CCHCR1-208ENST00000451521 TERF2Q15554 542 aa17.53■□□□□ 0.4
CCHCR1-208ENST00000451521 C11orf57Q6ZUT1 292 aaPredicted RBP17.53■□□□□ 0.4
CCHCR1-208ENST00000451521 SRBD1Q8N5C6 995 aaKnown RBP17.53■□□□□ 0.4
CCHCR1-208ENST00000451521 DYNLL2Q96FJ2 89 aa17.53■□□□□ 0.4
CCHCR1-208ENST00000451521 COA1Q9GZY4 146 aa17.53■□□□□ 0.4
CCHCR1-208ENST00000451521 RIMBP2O15034 1052 aa17.53■□□□□ 0.4
CCHCR1-208ENST00000451521 OXER1Q8TDS5 423 aa17.53■□□□□ 0.4
CCHCR1-208ENST00000451521 TRIM5Q9C035 493 aa17.53■□□□□ 0.4
CCHCR1-208ENST00000451521 RHBDL3P58872 404 aa17.52■□□□□ 0.4
CCHCR1-208ENST00000451521 VPS54Q9P1Q0 977 aa17.52■□□□□ 0.4
CCHCR1-208ENST00000451521 PLCD1P51178 756 aa17.52■□□□□ 0.39
CCHCR1-208ENST00000451521 TPD52L1Q16890 204 aaPredicted RBP17.52■□□□□ 0.39
CCHCR1-208ENST00000451521 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.52■□□□□ 0.39
CCHCR1-208ENST00000451521 KRI1Q8N9T8 703 aaKnown RBP17.52■□□□□ 0.39
CCHCR1-208ENST00000451521 CACTINQ8WUQ7 758 aaKnown RBP17.52■□□□□ 0.39
CCHCR1-208ENST00000451521 SUGT1Q9Y2Z0 365 aa17.52■□□□□ 0.39
CCHCR1-208ENST00000451521 MYH1P12882 1939 aa17.52■□□□□ 0.39
CCHCR1-208ENST00000451521 ALDH1B1P30837 517 aa17.51■□□□□ 0.39
CCHCR1-208ENST00000451521 PDE6BP35913 854 aa17.51■□□□□ 0.39
CCHCR1-208ENST00000451521 SYKP43405 635 aa17.51■□□□□ 0.39
CCHCR1-208ENST00000451521 MAPKAPK5Q8IW41 473 aa17.51■□□□□ 0.39
CCHCR1-208ENST00000451521 KRT222Q8N1A0 295 aa17.51■□□□□ 0.39
CCHCR1-208ENST00000451521 CAMKK2Q96RR4 588 aa17.51■□□□□ 0.39
CCHCR1-208ENST00000451521 MKNK2Q9HBH9 465 aa17.51■□□□□ 0.39
CCHCR1-208ENST00000451521 PTPREP23469 700 aa17.51■□□□□ 0.39
CCHCR1-208ENST00000451521 KIF5BP33176 963 aa17.51■□□□□ 0.39
CCHCR1-208ENST00000451521 KRT2P35908 639 aa17.51■□□□□ 0.39
CCHCR1-208ENST00000451521 TEX11Q8IYF3 940 aa17.51■□□□□ 0.39
CCHCR1-208ENST00000451521 FBXO41Q8TF61 875 aa17.51■□□□□ 0.39
CCHCR1-208ENST00000451521 CLIC6Q96NY7 704 aa17.51■□□□□ 0.39
CCHCR1-208ENST00000451521 KAT14Q9H8E8 782 aa17.51■□□□□ 0.39
CCHCR1-208ENST00000451521 CHRNA5P30532 468 aa17.5■□□□□ 0.39
CCHCR1-208ENST00000451521 NPY5RQ15761 445 aa17.5■□□□□ 0.39
CCHCR1-208ENST00000451521 C16orf86Q6ZW13 317 aa17.5■□□□□ 0.39
CCHCR1-208ENST00000451521 FBXO2Q9UK22 296 aaPredicted RBP17.5■□□□□ 0.39
CCHCR1-208ENST00000451521 FLT1P17948 1338 aa17.5■□□□□ 0.39
CCHCR1-208ENST00000451521 RASA1P20936 1047 aa17.5■□□□□ 0.39
CCHCR1-208ENST00000451521 KMT5BQ4FZB7 885 aa17.5■□□□□ 0.39
CCHCR1-208ENST00000451521 CEP135Q66GS9 1140 aa17.5■□□□□ 0.39
CCHCR1-208ENST00000451521 TNFRSF25Q93038 417 aa17.5■□□□□ 0.39
CCHCR1-208ENST00000451521 ZNF622Q969S3 477 aaKnown RBP eCLIP17.5■□□□□ 0.393e-6■■□□□ 13.3
CCHCR1-208ENST00000451521 ZNF287Q9HBT7 754 aa17.5■□□□□ 0.39
CCHCR1-208ENST00000451521 CEP131Q9UPN4 1083 aa17.5■□□□□ 0.39
CCHCR1-208ENST00000451521 PCDHB6Q9Y5E3 794 aa17.5■□□□□ 0.39
CCHCR1-208ENST00000451521 hCG_1642624A0A1W2PR95 340 aa17.49■□□□□ 0.39
CCHCR1-208ENST00000451521 GTF2IP78347 998 aa17.49■□□□□ 0.39
CCHCR1-208ENST00000451521 SLC15A2Q16348 729 aa17.49■□□□□ 0.39
CCHCR1-208ENST00000451521 CCDC144BQ3MJ40 725 aa17.49■□□□□ 0.39
CCHCR1-208ENST00000451521 SARM1Q6SZW1 724 aa17.49■□□□□ 0.39
CCHCR1-208ENST00000451521 DHX40Q8IX18 779 aaKnown RBP17.49■□□□□ 0.39
CCHCR1-208ENST00000451521 ELOA2Q8IYF1 753 aaPredicted RBP17.49■□□□□ 0.39
CCHCR1-208ENST00000451521 ZNF444Q8N0Y2 327 aaPredicted RBP17.49■□□□□ 0.39
CCHCR1-208ENST00000451521 ZNF579Q8NAF0 562 aaKnown RBP17.49■□□□□ 0.39
CCHCR1-208ENST00000451521 ZNF397Q8NF99 534 aaPredicted RBP17.49■□□□□ 0.39
CCHCR1-208ENST00000451521 ERCC4Q92889 916 aaPredicted RBP17.49■□□□□ 0.39
CCHCR1-208ENST00000451521 MASTLQ96GX5 879 aa17.49■□□□□ 0.39
CCHCR1-208ENST00000451521 CABP5Q9NP86 173 aa17.49■□□□□ 0.39
CCHCR1-208ENST00000451521 SAP30BPQ9UHR5 308 aaKnown RBP17.49■□□□□ 0.39
CCHCR1-208ENST00000451521 PARP3Q9Y6F1 533 aa17.49■□□□□ 0.39
CCHCR1-208ENST00000451521 TSPY3P0CV98 308 aa17.49■□□□□ 0.39
CCHCR1-208ENST00000451521 TSPY8P0CW00 308 aa17.49■□□□□ 0.39
CCHCR1-208ENST00000451521 GRM4Q14833 912 aa17.49■□□□□ 0.39
CCHCR1-208ENST00000451521 PFKFB3Q16875 520 aaPredicted RBP17.49■□□□□ 0.39
CCHCR1-208ENST00000451521 CEP57L1Q8IYX8 460 aa17.49■□□□□ 0.39
CCHCR1-208ENST00000451521 PNMA1Q8ND90 353 aa17.49■□□□□ 0.39
CCHCR1-208ENST00000451521 ZNF592Q92610 1267 aa17.49■□□□□ 0.39
CCHCR1-208ENST00000451521 BPIFA3Q9BQP9 254 aa17.49■□□□□ 0.39
CCHCR1-208ENST00000451521 SNED1Q8TER0 1413 aa17.49■□□□□ 0.39
CCHCR1-208ENST00000451521 SCG2P13521 617 aa17.48■□□□□ 0.39
CCHCR1-208ENST00000451521 SLC44A5Q8NCS7 719 aa17.48■□□□□ 0.39
CCHCR1-208ENST00000451521 NAT10Q9H0A0 1025 aaKnown RBP17.48■□□□□ 0.39
CCHCR1-208ENST00000451521 CLIP2Q9UDT6 1046 aa17.48■□□□□ 0.39
CCHCR1-208ENST00000451521 DAGLAQ9Y4D2 1042 aa17.48■□□□□ 0.39
CCHCR1-208ENST00000451521 SRPRBQ9Y5M8 271 aaKnown RBP17.48■□□□□ 0.39
CCHCR1-208ENST00000451521 USP17L3A6NCW0 530 aa17.48■□□□□ 0.39
CCHCR1-208ENST00000451521 USP17L4A6NCW7 530 aa17.48■□□□□ 0.39
CCHCR1-208ENST00000451521 USP17L1Q7RTZ2 530 aa17.48■□□□□ 0.39
CCHCR1-208ENST00000451521 ZC3H12CQ9C0D7 883 aaKnown RBP17.48■□□□□ 0.39
CCHCR1-208ENST00000451521 BRMS1Q9HCU9 246 aa17.48■□□□□ 0.39
CCHCR1-208ENST00000451521 FAM53CQ9NYF3 392 aa17.48■□□□□ 0.39
CCHCR1-208ENST00000451521 TUBE1Q9UJT0 475 aa17.48■□□□□ 0.39
CCHCR1-208ENST00000451521 ZNF215Q9UL58 517 aaPredicted RBP17.48■□□□□ 0.39
CCHCR1-208ENST00000451521 GOLGA6L19H0YKK7 550 aa17.47■□□□□ 0.39
CCHCR1-208ENST00000451521 CDK8P49336 464 aa17.47■□□□□ 0.39
CCHCR1-208ENST00000451521 NLRP12P59046 1061 aa17.47■□□□□ 0.39
CCHCR1-208ENST00000451521 EARS2Q5JPH6 523 aaKnown RBP17.47■□□□□ 0.39
CCHCR1-208ENST00000451521 FBXW7Q969H0 707 aa17.47■□□□□ 0.39
CCHCR1-208ENST00000451521 MXD3Q9BW11 206 aa17.47■□□□□ 0.39
CCHCR1-208ENST00000451521 KCNH3Q9ULD8 1083 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms