RNA–Protein interactions for RNA: ENST00000449954.1

LINC01961-201, Transcript of long intergenic non-protein coding RNA 1961, humanhuman

TSL 5 BASIC

Gene LINC01961, Length 745 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01961-201ENST00000449954 CHMP3Q9Y3E7 222 aa9.97□□□□□ -0.81
LINC01961-201ENST00000449954 C5orf42Q9H799 3197 aa9.96□□□□□ -0.81
LINC01961-201ENST00000449954 PLXNA1Q9UIW2 1896 aa9.96□□□□□ -0.81
LINC01961-201ENST00000449954 ENTPD3O75355 529 aa9.96□□□□□ -0.82
LINC01961-201ENST00000449954 GLRX3O76003 335 aaKnown RBP9.96□□□□□ -0.82
LINC01961-201ENST00000449954 HMGCS2P54868 508 aa9.96□□□□□ -0.82
LINC01961-201ENST00000449954 TLE2Q04725 743 aa9.96□□□□□ -0.82
LINC01961-201ENST00000449954 SKIV2LQ15477 1246 aaKnown RBP9.96□□□□□ -0.82
LINC01961-201ENST00000449954 SH3D19Q5HYK7 790 aa9.96□□□□□ -0.82
LINC01961-201ENST00000449954 TMEM134Q9H6X4 195 aa9.96□□□□□ -0.82
LINC01961-201ENST00000449954 SLC28A3Q9HAS3 691 aa9.96□□□□□ -0.82
LINC01961-201ENST00000449954 CWC22Q9HCG8 908 aaKnown RBP9.96□□□□□ -0.82
LINC01961-201ENST00000449954 IQSEC3Q9UPP2 1182 aaPredicted RBP9.96□□□□□ -0.82
LINC01961-201ENST00000449954 TLL1O43897 1013 aa9.95□□□□□ -0.82
LINC01961-201ENST00000449954 HOXA7P31268 230 aaPredicted RBP9.95□□□□□ -0.82
LINC01961-201ENST00000449954 HERVK_113P62684 666 aa9.95□□□□□ -0.82
LINC01961-201ENST00000449954 ERVK-9P63128 1117 aa9.95□□□□□ -0.82
LINC01961-201ENST00000449954 ERVK-24P63145 666 aa9.95□□□□□ -0.82
LINC01961-201ENST00000449954 SPP2Q13103 211 aa9.95□□□□□ -0.82
LINC01961-201ENST00000449954 RASIP1Q5U651 963 aa9.95□□□□□ -0.82
LINC01961-201ENST00000449954 MICALL1Q8N3F8 863 aa9.95□□□□□ -0.82
LINC01961-201ENST00000449954 EDC3Q96F86 508 aaKnown RBP9.95□□□□□ -0.82
LINC01961-201ENST00000449954 FBXL18Q96ME1 805 aa9.95□□□□□ -0.82
LINC01961-201ENST00000449954 MTRQ99707 1265 aa9.95□□□□□ -0.82
LINC01961-201ENST00000449954 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.95□□□□□ -0.82
LINC01961-201ENST00000449954 IDI2Q9BXS1 227 aa9.95□□□□□ -0.82
LINC01961-201ENST00000449954 RFX7Q2KHR2 1363 aa9.94□□□□□ -0.82
LINC01961-201ENST00000449954 MROH5Q6ZUA9 1318 aa9.94□□□□□ -0.82
LINC01961-201ENST00000449954 HOXC6P09630 235 aa9.94□□□□□ -0.82
LINC01961-201ENST00000449954 CYBAP13498 195 aa9.94□□□□□ -0.82
LINC01961-201ENST00000449954 FOXO4P98177 505 aa9.94□□□□□ -0.82
LINC01961-201ENST00000449954 ATP2B2Q01814 1243 aa9.94□□□□□ -0.82
LINC01961-201ENST00000449954 PPIGQ13427 754 aaKnown RBP eCLIP9.94□□□□□ -0.82
LINC01961-201ENST00000449954 NEUROD2Q15784 382 aa9.94□□□□□ -0.82
LINC01961-201ENST00000449954 CSPP1Q1MSJ5 1256 aa9.94□□□□□ -0.82
LINC01961-201ENST00000449954 CCDC84Q86UT8 332 aaPredicted RBP9.94□□□□□ -0.82
LINC01961-201ENST00000449954 ZSCAN29Q8IWY8 852 aaPredicted RBP9.94□□□□□ -0.82
LINC01961-201ENST00000449954 WDR66Q8TBY9 1149 aa9.94□□□□□ -0.82
LINC01961-201ENST00000449954 OSBPL5Q9H0X9 879 aaPredicted RBP9.94□□□□□ -0.82
LINC01961-201ENST00000449954 PORCNQ9H237 461 aa9.94□□□□□ -0.82
LINC01961-201ENST00000449954 TXNRD2Q9NNW7 524 aa9.94□□□□□ -0.82
LINC01961-201ENST00000449954 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.94□□□□□ -0.82
LINC01961-201ENST00000449954 KIF16BQ96L93 1317 aa9.93□□□□□ -0.82
LINC01961-201ENST00000449954 ELL2O00472 640 aaPredicted RBP9.93□□□□□ -0.82
LINC01961-201ENST00000449954 GPR37O15354 613 aa9.93□□□□□ -0.82
LINC01961-201ENST00000449954 ZEB1P37275 1124 aaPredicted RBP9.93□□□□□ -0.82
LINC01961-201ENST00000449954 ADCYAP1R1P41586 468 aa9.93□□□□□ -0.82
LINC01961-201ENST00000449954 RGS3P49796 1198 aa9.93□□□□□ -0.82
LINC01961-201ENST00000449954 CCNA1P78396 465 aa9.93□□□□□ -0.82
LINC01961-201ENST00000449954 PSRC1Q6PGN9 363 aaPredicted RBP9.93□□□□□ -0.82
LINC01961-201ENST00000449954 ZFPM1Q8IX07 1006 aa9.93□□□□□ -0.82
LINC01961-201ENST00000449954 LINS1Q8NG48 757 aa9.93□□□□□ -0.82
LINC01961-201ENST00000449954 UIMC1Q96RL1 719 aa9.93□□□□□ -0.82
LINC01961-201ENST00000449954 MTIF3Q9H2K0 278 aaKnown RBP9.93□□□□□ -0.82
LINC01961-201ENST00000449954 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.93□□□□□ -0.82
LINC01961-201ENST00000449954 IL21Q9HBE4 155 aa9.93□□□□□ -0.82
LINC01961-201ENST00000449954 AS3MTQ9HBK9 375 aa9.93□□□□□ -0.82
LINC01961-201ENST00000449954 TMEM39AQ9NV64 488 aa9.93□□□□□ -0.82
LINC01961-201ENST00000449954 USP40Q9NVE5 1235 aa9.93□□□□□ -0.82
LINC01961-201ENST00000449954 FLRT1Q9NZU1 646 aa9.93□□□□□ -0.82
LINC01961-201ENST00000449954 MYH13Q9UKX3 1938 aa9.92□□□□□ -0.82
LINC01961-201ENST00000449954 ZNF521Q96K83 1311 aa9.92□□□□□ -0.82
LINC01961-201ENST00000449954 SLC15A5A6NIM6 579 aa9.92□□□□□ -0.82
LINC01961-201ENST00000449954 USP17L5A8MUK1 530 aa9.92□□□□□ -0.82
LINC01961-201ENST00000449954 GRXCR1A8MXD5 290 aa9.92□□□□□ -0.82
LINC01961-201ENST00000449954 SEPT4O43236 478 aa9.92□□□□□ -0.82
LINC01961-201ENST00000449954 ZNF853P0CG23 659 aa9.92□□□□□ -0.82
LINC01961-201ENST00000449954 ALADP13716 330 aa9.92□□□□□ -0.82
LINC01961-201ENST00000449954 DIXDC1Q155Q3 683 aa9.92□□□□□ -0.82
LINC01961-201ENST00000449954 LMBR1LQ6UX01 489 aa9.92□□□□□ -0.82
LINC01961-201ENST00000449954 SLC44A5Q8NCS7 719 aa9.92□□□□□ -0.82
LINC01961-201ENST00000449954 ZNF594Q96JF6 807 aaPredicted RBP9.92□□□□□ -0.82
LINC01961-201ENST00000449954 STK31Q9BXU1 1019 aa9.92□□□□□ -0.82
LINC01961-201ENST00000449954 IFT57Q9NWB7 429 aa9.92□□□□□ -0.82
LINC01961-201ENST00000449954 TMOD4Q9NZQ9 345 aa9.92□□□□□ -0.82
LINC01961-201ENST00000449954 RBPJLQ9UBG7 517 aa9.92□□□□□ -0.82
LINC01961-201ENST00000449954 PHF24Q9UPV7 400 aa9.92□□□□□ -0.82
LINC01961-201ENST00000449954 IVNS1ABPQ9Y6Y0 642 aa9.92□□□□□ -0.82
LINC01961-201ENST00000449954 ATAD5Q96QE3 1844 aa9.91□□□□□ -0.82
LINC01961-201ENST00000449954 PQBP1O60828 265 aaKnown RBP9.91□□□□□ -0.82
LINC01961-201ENST00000449954 TIMP1P01033 207 aa9.91□□□□□ -0.82
LINC01961-201ENST00000449954 POU3F3P20264 500 aaPredicted RBP9.91□□□□□ -0.82
LINC01961-201ENST00000449954 CYP2C19P33261 490 aa9.91□□□□□ -0.82
LINC01961-201ENST00000449954 COPS2P61201 443 aa9.91□□□□□ -0.82
LINC01961-201ENST00000449954 CALD1Q05682 793 aaKnown RBP9.91□□□□□ -0.82
LINC01961-201ENST00000449954 LRRC41Q15345 812 aa9.91□□□□□ -0.82
LINC01961-201ENST00000449954 TMEM240Q5SV17 173 aa9.91□□□□□ -0.82
LINC01961-201ENST00000449954 MFSD5Q6N075 450 aa9.91□□□□□ -0.82
LINC01961-201ENST00000449954 SH3BP5LQ7L8J4 393 aa9.91□□□□□ -0.82
LINC01961-201ENST00000449954 ANKRD33Q7Z3H0 272 aa9.91□□□□□ -0.82
LINC01961-201ENST00000449954 METTL3Q86U44 580 aaKnown RBP9.91□□□□□ -0.82
LINC01961-201ENST00000449954 TRPV1Q8NER1 839 aa9.91□□□□□ -0.82
LINC01961-201ENST00000449954 HLA-CQ95604 372 aa9.91□□□□□ -0.82
LINC01961-201ENST00000449954 FERMT2Q96AC1 680 aa9.91□□□□□ -0.82
LINC01961-201ENST00000449954 TOX2Q96NM4 488 aa9.91□□□□□ -0.82
LINC01961-201ENST00000449954 PAGR1Q9BTK6 254 aa9.91□□□□□ -0.82
LINC01961-201ENST00000449954 NKX2-4Q9H2Z4 354 aa9.91□□□□□ -0.82
LINC01961-201ENST00000449954 DDTLA6NHG4 134 aaPredicted RBP9.9□□□□□ -0.82
LINC01961-201ENST00000449954 DCDC2CA8MYV0 355 aa9.9□□□□□ -0.82
LINC01961-201ENST00000449954 IGHA2P01877 340 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms