RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 LBX2Q6XYB7 198 aa18.27■□□□□ 0.52
CHD3-205ENST00000449744 CLEC10AQ8IUN9 316 aa18.27■□□□□ 0.52
CHD3-205ENST00000449744 STK11IPQ8N1F8 1099 aa18.27■□□□□ 0.52
CHD3-205ENST00000449744 DEFB118Q96PH6 123 aa18.27■□□□□ 0.52
CHD3-205ENST00000449744 NACAP1Q9BZK3 213 aa18.27■□□□□ 0.52
CHD3-205ENST00000449744 VCPKMTQ9H867 229 aa18.27■□□□□ 0.52
CHD3-205ENST00000449744 KANSL2Q9H9L4 492 aa18.27■□□□□ 0.52
CHD3-205ENST00000449744 HOXC10Q9NYD6 342 aa18.27■□□□□ 0.52
CHD3-205ENST00000449744 PATL2C9JE40 543 aaKnown RBP18.26■□□□□ 0.51
CHD3-205ENST00000449744 CNMDO75829 334 aa18.26■□□□□ 0.51
CHD3-205ENST00000449744 TFRCP02786 760 aaKnown RBP18.26■□□□□ 0.51
CHD3-205ENST00000449744 CAPN2P17655 700 aa18.26■□□□□ 0.51
CHD3-205ENST00000449744 RGS2P41220 211 aa18.26■□□□□ 0.51
CHD3-205ENST00000449744 POTEEQ6S8J3 1075 aa18.26■□□□□ 0.51
CHD3-205ENST00000449744 TRMT44Q8IYL2 757 aaKnown RBP18.26■□□□□ 0.51
CHD3-205ENST00000449744 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.26■□□□□ 0.51
CHD3-205ENST00000449744 RWDD1Q9H446 243 aaPredicted RBP18.26■□□□□ 0.51
CHD3-205ENST00000449744 ZNF287Q9HBT7 754 aa18.26■□□□□ 0.51
CHD3-205ENST00000449744 XRCC5P13010 732 aaKnown RBP18.25■□□□□ 0.51
CHD3-205ENST00000449744 EEF2P13639 858 aaKnown RBP18.25■□□□□ 0.51
CHD3-205ENST00000449744 SIAH1Q8IUQ4 282 aa18.25■□□□□ 0.51
CHD3-205ENST00000449744 IFNL3Q8IZI9 196 aa18.25■□□□□ 0.51
CHD3-205ENST00000449744 SPICE1Q8N0Z3 855 aa18.25■□□□□ 0.51
CHD3-205ENST00000449744 TRIB2Q92519 343 aa18.25■□□□□ 0.51
CHD3-205ENST00000449744 SEC62Q99442 399 aaKnown RBP18.25■□□□□ 0.51
CHD3-205ENST00000449744 EPB41L4AQ9HCS5 686 aaPredicted RBP18.25■□□□□ 0.51
CHD3-205ENST00000449744 HMX1Q9NP08 348 aaPredicted RBP18.25■□□□□ 0.51
CHD3-205ENST00000449744 BTBD7Q9P203 1132 aa18.25■□□□□ 0.51
CHD3-205ENST00000449744 IVNS1ABPQ9Y6Y0 642 aa18.25■□□□□ 0.51
CHD3-205ENST00000449744 RPTORQ8N122 1335 aa18.24■□□□□ 0.51
CHD3-205ENST00000449744 SALL3Q9BXA9 1300 aa18.24■□□□□ 0.51
CHD3-205ENST00000449744 RAD21O60216 631 aa18.24■□□□□ 0.51
CHD3-205ENST00000449744 FLOT1O75955 427 aa18.24■□□□□ 0.51
CHD3-205ENST00000449744 FARP2O94887 1054 aaPredicted RBP18.24■□□□□ 0.51
CHD3-205ENST00000449744 ZKSCAN1P17029 563 aaPredicted RBP18.24■□□□□ 0.51
CHD3-205ENST00000449744 KIAA1755Q5JYT7 1200 aa18.24■□□□□ 0.51
CHD3-205ENST00000449744 ZMYM1Q5SVZ6 1142 aa18.24■□□□□ 0.51
CHD3-205ENST00000449744 EVI5LQ96CN4 794 aa18.24■□□□□ 0.51
CHD3-205ENST00000449744 GOPCQ9HD26 462 aa18.24■□□□□ 0.51
CHD3-205ENST00000449744 PAK6Q9NQU5 681 aaPredicted RBP18.24■□□□□ 0.51
CHD3-205ENST00000449744 PLXNB2O15031 1838 aa18.23■□□□□ 0.51
CHD3-205ENST00000449744 ROBO3Q96MS0 1386 aa18.23■□□□□ 0.51
CHD3-205ENST00000449744 WDR46O15213 610 aaKnown RBP18.23■□□□□ 0.51
CHD3-205ENST00000449744 DSG3P32926 999 aa18.23■□□□□ 0.51
CHD3-205ENST00000449744 PDE1AP54750 535 aa18.23■□□□□ 0.51
CHD3-205ENST00000449744 TRIM32Q13049 653 aa18.23■□□□□ 0.51
CHD3-205ENST00000449744 MAP2K5Q13163 448 aa18.23■□□□□ 0.51
CHD3-205ENST00000449744 HABP4Q5JVS0 413 aaKnown RBP18.23■□□□□ 0.51
CHD3-205ENST00000449744 MORN1Q5T089 497 aa18.23■□□□□ 0.51
CHD3-205ENST00000449744 SAMD1Q6SPF0 538 aaPredicted RBP18.23■□□□□ 0.51
CHD3-205ENST00000449744 ZNF444Q8N0Y2 327 aaPredicted RBP18.23■□□□□ 0.51
CHD3-205ENST00000449744 MB21D1Q8N884 522 aa18.23■□□□□ 0.51
CHD3-205ENST00000449744 DPF3Q92784 378 aa18.23■□□□□ 0.51
CHD3-205ENST00000449744 APBA2Q99767 749 aa18.23■□□□□ 0.51
CHD3-205ENST00000449744 HTATIP2Q9BUP3 242 aa18.23■□□□□ 0.51
CHD3-205ENST00000449744 NAPBQ9H115 298 aa18.23■□□□□ 0.51
CHD3-205ENST00000449744 STAP2Q9UGK3 403 aa18.23■□□□□ 0.51
CHD3-205ENST00000449744 SLC15A5A6NIM6 579 aa18.22■□□□□ 0.51
CHD3-205ENST00000449744 SLC3A2P08195 630 aaKnown RBP18.22■□□□□ 0.51
CHD3-205ENST00000449744 RASA1P20936 1047 aa18.22■□□□□ 0.51
CHD3-205ENST00000449744 PTPREP23469 700 aa18.22■□□□□ 0.51
CHD3-205ENST00000449744 USP6NLQ92738 828 aa18.22■□□□□ 0.51
CHD3-205ENST00000449744 LNPKQ9C0E8 428 aa18.22■□□□□ 0.51
CHD3-205ENST00000449744 PRKAR2AP13861 404 aaKnown RBP18.21■□□□□ 0.51
CHD3-205ENST00000449744 PLS1Q14651 629 aa18.21■□□□□ 0.51
CHD3-205ENST00000449744 B4GALNT3Q6L9W6 998 aa18.21■□□□□ 0.51
CHD3-205ENST00000449744 EXOC6Q8TAG9 804 aa18.21■□□□□ 0.51
CHD3-205ENST00000449744 ATG4CQ96DT6 458 aa18.21■□□□□ 0.51
CHD3-205ENST00000449744 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.21■□□□□ 0.51
CHD3-205ENST00000449744 MOV10L1Q9BXT6 1211 aaKnown RBP18.21■□□□□ 0.51
CHD3-205ENST00000449744 SPATC1LQ9H0A9 340 aa18.21■□□□□ 0.51
CHD3-205ENST00000449744 PRDM1O75626 825 aa18.2■□□□□ 0.5
CHD3-205ENST00000449744 PDE4BQ07343 736 aa18.2■□□□□ 0.5
CHD3-205ENST00000449744 CCL14Q16627 93 aa18.2■□□□□ 0.5
CHD3-205ENST00000449744 UBE2Q1Q7Z7E8 422 aa18.2■□□□□ 0.5
CHD3-205ENST00000449744 SMC5Q8IY18 1101 aa18.2■□□□□ 0.5
CHD3-205ENST00000449744 CRISPLD2Q9H0B8 497 aa18.2■□□□□ 0.5
CHD3-205ENST00000449744 NYAP2Q9P242 653 aa18.2■□□□□ 0.5
CHD3-205ENST00000449744 CENPFP49454 3210 aa18.19■□□□□ 0.5
CHD3-205ENST00000449744 PPARAQ07869 468 aa18.19■□□□□ 0.5
CHD3-205ENST00000449744 GRB14Q14449 540 aa18.19■□□□□ 0.5
CHD3-205ENST00000449744 MAP3K21Q5TCX8 1036 aa18.19■□□□□ 0.5
CHD3-205ENST00000449744 MFSD14CQ5VZR4 134 aa18.19■□□□□ 0.5
CHD3-205ENST00000449744 CCDC129Q6ZRS4 1044 aa18.19■□□□□ 0.5
CHD3-205ENST00000449744 SHCBP1Q8NEM2 672 aa18.19■□□□□ 0.5
CHD3-205ENST00000449744 MKI67P46013 3256 aaKnown RBP18.19■□□□□ 0.5
CHD3-205ENST00000449744 TRIM6-TRIM34B2RNG4 842 aa18.18■□□□□ 0.5
CHD3-205ENST00000449744 STRNO43815 780 aa18.18■□□□□ 0.5
CHD3-205ENST00000449744 TSPY3P0CV98 308 aa18.18■□□□□ 0.5
CHD3-205ENST00000449744 TSPY8P0CW00 308 aa18.18■□□□□ 0.5
CHD3-205ENST00000449744 ERCC3P19447 782 aa18.18■□□□□ 0.5
CHD3-205ENST00000449744 CACNB2Q08289 660 aaPredicted RBP18.18■□□□□ 0.5
CHD3-205ENST00000449744 FAM83BQ5T0W9 1011 aa18.18■□□□□ 0.5
CHD3-205ENST00000449744 DPP9Q86TI2 863 aa18.18■□□□□ 0.5
CHD3-205ENST00000449744 NCAPG2Q86XI2 1143 aa18.18■□□□□ 0.5
CHD3-205ENST00000449744 ANKLE1Q8NAG6 615 aa18.18■□□□□ 0.5
CHD3-205ENST00000449744 MROH8Q9H579 483 aa18.18■□□□□ 0.5
CHD3-205ENST00000449744 HELLSQ9NRZ9 838 aa18.18■□□□□ 0.5
CHD3-205ENST00000449744 CLIP2Q9UDT6 1046 aa18.18■□□□□ 0.5
CHD3-205ENST00000449744 SUPT16HQ9Y5B9 1047 aaKnown RBP18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 577.6 ms