RNA–Protein interactions for RNA: ENST00000449575.6

CCDC171-203, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-203ENST00000449575 CLIP2Q9UDT6 1046 aa11.58□□□□□ -0.56
CCDC171-203ENST00000449575 BAZ2BQ9UIF8 2168 aaKnown RBP11.58□□□□□ -0.56
CCDC171-203ENST00000449575 CCL15-CCL14A0A0B4J2E2 113 aa11.57□□□□□ -0.56
CCDC171-203ENST00000449575 USP17L10C9JJH3 530 aa11.57□□□□□ -0.56
CCDC171-203ENST00000449575 BACE1P56817 501 aa11.57□□□□□ -0.56
CCDC171-203ENST00000449575 NOGQ13253 232 aa11.57□□□□□ -0.56
CCDC171-203ENST00000449575 CCL15Q16663 113 aa11.57□□□□□ -0.56
CCDC171-203ENST00000449575 TREML2Q5T2D2 321 aa11.57□□□□□ -0.56
CCDC171-203ENST00000449575 SPICE1Q8N0Z3 855 aa11.57□□□□□ -0.56
CCDC171-203ENST00000449575 MAP7D2Q96T17 732 aa11.57□□□□□ -0.56
CCDC171-203ENST00000449575 KANSL2Q9H9L4 492 aa11.57□□□□□ -0.56
CCDC171-203ENST00000449575 STX8Q9UNK0 236 aa11.57□□□□□ -0.56
CCDC171-203ENST00000449575 A0A0G2JLL6 359 aaPredicted RBP11.57□□□□□ -0.56
CCDC171-203ENST00000449575 PRRT2Q7Z6L0 340 aaPredicted RBP11.57□□□□□ -0.56
CCDC171-203ENST00000449575 NCOA7Q8NI08 942 aa11.57□□□□□ -0.56
CCDC171-203ENST00000449575 KRT23Q9C075 422 aa11.57□□□□□ -0.56
CCDC171-203ENST00000449575 MTMR7Q9Y216 660 aa11.57□□□□□ -0.56
CCDC171-203ENST00000449575 SMCHD1A6NHR9 2005 aa11.57□□□□□ -0.56
CCDC171-203ENST00000449575 COL11A1P12107 1806 aaPredicted RBP11.57□□□□□ -0.56
CCDC171-203ENST00000449575 BTBD19C9JJ37 291 aa11.56□□□□□ -0.56
CCDC171-203ENST00000449575 PCP11498 1178 aaKnown RBP11.56□□□□□ -0.56
CCDC171-203ENST00000449575 SNAPC2Q13487 334 aa11.56□□□□□ -0.56
CCDC171-203ENST00000449575 TSGA10IPQ3SY00 556 aa11.56□□□□□ -0.56
CCDC171-203ENST00000449575 GPAT2Q6NUI2 795 aa11.56□□□□□ -0.56
CCDC171-203ENST00000449575 GADL1Q6ZQY3 521 aa11.56□□□□□ -0.56
CCDC171-203ENST00000449575 ENAHQ8N8S7 591 aaPredicted RBP11.56□□□□□ -0.56
CCDC171-203ENST00000449575 FEZ1Q99689 392 aa11.56□□□□□ -0.56
CCDC171-203ENST00000449575 AS3MTQ9HBK9 375 aa11.56□□□□□ -0.56
CCDC171-203ENST00000449575 CXCL11O14625 94 aa11.56□□□□□ -0.56
CCDC171-203ENST00000449575 RAD21O60216 631 aa11.56□□□□□ -0.56
CCDC171-203ENST00000449575 CDK11BP21127 795 aaKnown RBP11.56□□□□□ -0.56
CCDC171-203ENST00000449575 TRDNQ13061 729 aa11.56□□□□□ -0.56
CCDC171-203ENST00000449575 RNF20Q5VTR2 975 aa11.56□□□□□ -0.56
CCDC171-203ENST00000449575 JAKMIP1Q96N16 626 aaKnown RBP11.56□□□□□ -0.56
CCDC171-203ENST00000449575 CNNM2Q9H8M5 875 aa11.56□□□□□ -0.56
CCDC171-203ENST00000449575 GRPEL1Q9HAV7 217 aa11.56□□□□□ -0.56
CCDC171-203ENST00000449575 GINM1Q9NU53 330 aa11.56□□□□□ -0.56
CCDC171-203ENST00000449575 TMX2Q9Y320 296 aa11.56□□□□□ -0.56
CCDC171-203ENST00000449575 TNKSO95271 1327 aa11.56□□□□□ -0.56
CCDC171-203ENST00000449575 DDX11L8A8MPP1 907 aa11.56□□□□□ -0.56
CCDC171-203ENST00000449575 TTLL1O95922 423 aa11.56□□□□□ -0.56
CCDC171-203ENST00000449575 NOVP48745 357 aa11.56□□□□□ -0.56
CCDC171-203ENST00000449575 GTF2A2P52657 109 aa11.56□□□□□ -0.56
CCDC171-203ENST00000449575 TERF1P54274 439 aa11.56□□□□□ -0.56
CCDC171-203ENST00000449575 SEC23AQ15436 765 aa11.56□□□□□ -0.56
CCDC171-203ENST00000449575 RALYLQ86SE5 291 aaKnown RBP11.56□□□□□ -0.56
CCDC171-203ENST00000449575 NEK1Q96PY6 1258 aa11.56□□□□□ -0.56
CCDC171-203ENST00000449575 ZSCAN10Q96SZ4 725 aaPredicted RBP11.56□□□□□ -0.56
CCDC171-203ENST00000449575 NUP88Q99567 741 aaPredicted RBP11.56□□□□□ -0.56
CCDC171-203ENST00000449575 TMEM47Q9BQJ4 181 aa11.56□□□□□ -0.56
CCDC171-203ENST00000449575 R3HDMLQ9H3Y0 253 aa11.56□□□□□ -0.56
CCDC171-203ENST00000449575 NYAP2Q9P242 653 aa11.56□□□□□ -0.56
CCDC171-203ENST00000449575 HTTP42858 3142 aa11.55□□□□□ -0.56
CCDC171-203ENST00000449575 PEX10O60683 326 aa11.55□□□□□ -0.56
CCDC171-203ENST00000449575 ZKSCAN1P17029 563 aaPredicted RBP11.55□□□□□ -0.56
CCDC171-203ENST00000449575 PANK2Q9BZ23 570 aa11.55□□□□□ -0.56
CCDC171-203ENST00000449575 UPF3BQ9BZI7 483 aaKnown RBP11.55□□□□□ -0.56
CCDC171-203ENST00000449575 KIAA1683Q9H0B3 1180 aa11.55□□□□□ -0.56
CCDC171-203ENST00000449575 TCP11L1Q9NUJ3 509 aa11.55□□□□□ -0.56
CCDC171-203ENST00000449575 TESPA1A2RU30 521 aaPredicted RBP11.55□□□□□ -0.56
CCDC171-203ENST00000449575 MANSC4A6NHS7 340 aaPredicted RBP11.55□□□□□ -0.56
CCDC171-203ENST00000449575 PRC1O43663 620 aa11.55□□□□□ -0.56
CCDC171-203ENST00000449575 TRAK2O60296 914 aa11.55□□□□□ -0.56
CCDC171-203ENST00000449575 MAP2K2P36507 400 aa11.55□□□□□ -0.56
CCDC171-203ENST00000449575 TM4SF4P48230 202 aa11.55□□□□□ -0.56
CCDC171-203ENST00000449575 SH3D19Q5HYK7 790 aa11.55□□□□□ -0.56
CCDC171-203ENST00000449575 IFNL1Q8IU54 200 aa11.55□□□□□ -0.56
CCDC171-203ENST00000449575 IGDCC4Q8TDY8 1250 aa11.55□□□□□ -0.56
CCDC171-203ENST00000449575 ARHGEF10LQ9HCE6 1279 aa11.55□□□□□ -0.56
CCDC171-203ENST00000449575 CHMP5Q9NZZ3 219 aa11.55□□□□□ -0.56
CCDC171-203ENST00000449575 TSKSQ9UJT2 592 aa11.55□□□□□ -0.56
CCDC171-203ENST00000449575 DOCK3Q8IZD9 2030 aa11.54□□□□□ -0.56
CCDC171-203ENST00000449575 ZSWIM8A7E2V4 1837 aa11.54□□□□□ -0.56
CCDC171-203ENST00000449575 F5H6K3 240 aa11.54□□□□□ -0.56
CCDC171-203ENST00000449575 EPB41L2O43491 1005 aaKnown RBP11.54□□□□□ -0.56
CCDC171-203ENST00000449575 CETPP11597 493 aa11.54□□□□□ -0.56
CCDC171-203ENST00000449575 VCAM1P19320 739 aa11.54□□□□□ -0.56
CCDC171-203ENST00000449575 KLRC3Q07444 240 aa11.54□□□□□ -0.56
CCDC171-203ENST00000449575 IQCA1Q86XH1 822 aa11.54□□□□□ -0.56
CCDC171-203ENST00000449575 MKL1Q969V6 931 aa11.54□□□□□ -0.56
CCDC171-203ENST00000449575 VCPKMTQ9H867 229 aa11.54□□□□□ -0.56
CCDC171-203ENST00000449575 CASP8AP2Q9UKL3 1982 aa11.54□□□□□ -0.56
CCDC171-203ENST00000449575 IFIT3O14879 490 aaKnown RBP11.54□□□□□ -0.56
CCDC171-203ENST00000449575 NDUFB10O96000 172 aa11.54□□□□□ -0.56
CCDC171-203ENST00000449575 CYP2C8P10632 490 aa11.54□□□□□ -0.56
CCDC171-203ENST00000449575 CASTP20810 708 aaKnown RBP11.54□□□□□ -0.56
CCDC171-203ENST00000449575 EXOSC10Q01780 885 aaKnown RBP11.54□□□□□ -0.56
CCDC171-203ENST00000449575 KIF2CQ99661 725 aa11.54□□□□□ -0.56
CCDC171-203ENST00000449575 UBAC1Q9BSL1 405 aa11.54□□□□□ -0.56
CCDC171-203ENST00000449575 MYH6P13533 1939 aa11.53□□□□□ -0.56
CCDC171-203ENST00000449575 C19orf81C9J6K1 198 aa11.53□□□□□ -0.56
CCDC171-203ENST00000449575 PDHXO00330 501 aa11.53□□□□□ -0.56
CCDC171-203ENST00000449575 PTMSP20962 102 aa11.53□□□□□ -0.56
CCDC171-203ENST00000449575 USP17L2Q6R6M4 530 aa11.53□□□□□ -0.56
CCDC171-203ENST00000449575 POTEEQ6S8J3 1075 aa11.53□□□□□ -0.56
CCDC171-203ENST00000449575 RAB11FIP4Q86YS3 637 aa11.53□□□□□ -0.56
CCDC171-203ENST00000449575 LARP6Q9BRS8 491 aaKnown RBP11.53□□□□□ -0.56
CCDC171-203ENST00000449575 TRPA1O75762 1119 aa11.53□□□□□ -0.56
CCDC171-203ENST00000449575 MCCP23508 829 aa11.53□□□□□ -0.56
CCDC171-203ENST00000449575 MCM5P33992 734 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms