RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 DIS3LQ8TF46 1054 aaKnown RBP17.4■□□□□ 0.38
USP39-206ENST00000448971 FEZ1Q99689 392 aa17.4■□□□□ 0.38
USP39-206ENST00000448971 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.4■□□□□ 0.38
USP39-206ENST00000448971 TAOK2Q9UL54 1235 aa17.4■□□□□ 0.38
USP39-206ENST00000448971 LOC285556D6RIA3 1793 aa17.4■□□□□ 0.38
USP39-206ENST00000448971 CUL9Q8IWT3 2517 aa17.39■□□□□ 0.37
USP39-206ENST00000448971 A0A0D9SFI3 127 aa17.39■□□□□ 0.37
USP39-206ENST00000448971 MNX1P50219 401 aaPredicted RBP17.39■□□□□ 0.37
USP39-206ENST00000448971 NECAB2Q7Z6G3 386 aa17.39■□□□□ 0.37
USP39-206ENST00000448971 NAPBQ9H115 298 aa17.39■□□□□ 0.37
USP39-206ENST00000448971 ASCC2Q9H1I8 757 aaPredicted RBP17.39■□□□□ 0.37
USP39-206ENST00000448971 HELLSQ9NRZ9 838 aa17.39■□□□□ 0.37
USP39-206ENST00000448971 MYH8P13535 1937 aa17.39■□□□□ 0.37
USP39-206ENST00000448971 MINDY4BA8MYZ0 360 aa17.38■□□□□ 0.37
USP39-206ENST00000448971 TRIM32Q13049 653 aa17.38■□□□□ 0.37
USP39-206ENST00000448971 NMIQ13287 307 aaPredicted RBP17.38■□□□□ 0.37
USP39-206ENST00000448971 C16orf86Q6ZW13 317 aa17.38■□□□□ 0.37
USP39-206ENST00000448971 CENPQQ7L2Z9 268 aaPredicted RBP17.38■□□□□ 0.37
USP39-206ENST00000448971 STK11IPQ8N1F8 1099 aa17.38■□□□□ 0.37
USP39-206ENST00000448971 ANKLE1Q8NAG6 615 aa17.38■□□□□ 0.37
USP39-206ENST00000448971 LRCH3Q96II8 777 aa17.38■□□□□ 0.37
USP39-206ENST00000448971 FAM227BQ96M60 508 aa17.38■□□□□ 0.37
USP39-206ENST00000448971 GDF15Q99988 308 aa17.38■□□□□ 0.37
USP39-206ENST00000448971 DIAPH3Q9NSV4 1193 aa17.38■□□□□ 0.37
USP39-206ENST00000448971 TMOD4Q9NZQ9 345 aa17.38■□□□□ 0.37
USP39-206ENST00000448971 RPTORQ8N122 1335 aa17.38■□□□□ 0.37
USP39-206ENST00000448971 ROBO3Q96MS0 1386 aa17.38■□□□□ 0.37
USP39-206ENST00000448971 PATL2C9JE40 543 aaKnown RBP17.37■□□□□ 0.37
USP39-206ENST00000448971 SMIM22K7EJ46 135 aa17.37■□□□□ 0.37
USP39-206ENST00000448971 HMGCRP04035 888 aa17.37■□□□□ 0.37
USP39-206ENST00000448971 BMP8BP34820 402 aa17.37■□□□□ 0.37
USP39-206ENST00000448971 CDK8P49336 464 aa17.37■□□□□ 0.37
USP39-206ENST00000448971 PABPC4Q13310 644 aaKnown RBP eCLIP17.37■□□□□ 0.37
USP39-206ENST00000448971 ZYXQ15942 572 aaKnown RBP17.37■□□□□ 0.37
USP39-206ENST00000448971 SBK1Q52WX2 424 aa17.37■□□□□ 0.37
USP39-206ENST00000448971 TTC22Q5TAA0 569 aa17.37■□□□□ 0.37
USP39-206ENST00000448971 IFNL3Q8IZI9 196 aa17.37■□□□□ 0.37
USP39-206ENST00000448971 WDR18Q9BV38 432 aa17.37■□□□□ 0.37
USP39-206ENST00000448971 MORF4L1Q9UBU8 362 aa17.37■□□□□ 0.37
USP39-206ENST00000448971 PLXNB2O15031 1838 aa17.37■□□□□ 0.37
USP39-206ENST00000448971 USP17L10C9JJH3 530 aa17.36■□□□□ 0.37
USP39-206ENST00000448971 SDSP20132 328 aa17.36■□□□□ 0.37
USP39-206ENST00000448971 BACE1P56817 501 aa17.36■□□□□ 0.37
USP39-206ENST00000448971 MCMDC2Q4G0Z9 681 aa17.36■□□□□ 0.37
USP39-206ENST00000448971 TMEM179Q6ZVK1 233 aa17.36■□□□□ 0.37
USP39-206ENST00000448971 TICAM2Q86XR7 235 aa17.36■□□□□ 0.37
USP39-206ENST00000448971 HMX1Q9NP08 348 aaPredicted RBP17.36■□□□□ 0.37
USP39-206ENST00000448971 HIP1O00291 1037 aa17.35■□□□□ 0.37
USP39-206ENST00000448971 AKR1B1P15121 316 aa17.35■□□□□ 0.37
USP39-206ENST00000448971 GSPT1P15170 499 aaKnown RBP17.35■□□□□ 0.37
USP39-206ENST00000448971 HOXA7P31268 230 aaPredicted RBP17.35■□□□□ 0.37
USP39-206ENST00000448971 SEPT2Q15019 361 aa17.35■□□□□ 0.37
USP39-206ENST00000448971 SLC17A8Q8NDX2 589 aa17.35■□□□□ 0.37
USP39-206ENST00000448971 CCDC136Q96JN2 1154 aa17.35■□□□□ 0.37
USP39-206ENST00000448971 P2RX7Q99572 595 aaKnown RBP17.35■□□□□ 0.37
USP39-206ENST00000448971 CCDC171Q6TFL3 1326 aa17.35■□□□□ 0.37
USP39-206ENST00000448971 DNAH12Q6ZR08 3092 aa17.34■□□□□ 0.37
USP39-206ENST00000448971 C19orf81C9J6K1 198 aa17.34■□□□□ 0.37
USP39-206ENST00000448971 PEX10O60683 326 aa17.34■□□□□ 0.37
USP39-206ENST00000448971 MFAP1P55081 439 aaKnown RBP17.34■□□□□ 0.37
USP39-206ENST00000448971 ICA1Q05084 483 aa17.34■□□□□ 0.37
USP39-206ENST00000448971 MAP3K21Q5TCX8 1036 aa17.34■□□□□ 0.37
USP39-206ENST00000448971 VPS53Q5VIR6 699 aa17.34■□□□□ 0.37
USP39-206ENST00000448971 CWC27Q6UX04 472 aaKnown RBP17.34■□□□□ 0.37
USP39-206ENST00000448971 ZNF589Q86UQ0 364 aaPredicted RBP17.34■□□□□ 0.37
USP39-206ENST00000448971 TRIB2Q92519 343 aa17.34■□□□□ 0.37
USP39-206ENST00000448971 CCDC17Q96LX7 622 aa17.34■□□□□ 0.37
USP39-206ENST00000448971 NBPF3Q9H094 633 aa17.34■□□□□ 0.37
USP39-206ENST00000448971 MKNK2Q9HBH9 465 aa17.34■□□□□ 0.37
USP39-206ENST00000448971 ZNF287Q9HBT7 754 aa17.34■□□□□ 0.37
USP39-206ENST00000448971 OGDHLQ9ULD0 1010 aa17.34■□□□□ 0.37
USP39-206ENST00000448971 LAMA2P24043 3122 aaKnown RBP17.33■□□□□ 0.37
USP39-206ENST00000448971 SLC3A2P08195 630 aaKnown RBP17.33■□□□□ 0.36
USP39-206ENST00000448971 GUCY1A2P33402 732 aa17.33■□□□□ 0.36
USP39-206ENST00000448971 USP14P54578 494 aa17.33■□□□□ 0.36
USP39-206ENST00000448971 IRX3P78415 501 aaPredicted RBP17.33■□□□□ 0.36
USP39-206ENST00000448971 PPARAQ07869 468 aa17.33■□□□□ 0.36
USP39-206ENST00000448971 USP17L2Q6R6M4 530 aa17.33■□□□□ 0.36
USP39-206ENST00000448971 POTEEQ6S8J3 1075 aa17.33■□□□□ 0.36
USP39-206ENST00000448971 CLEC10AQ8IUN9 316 aa17.33■□□□□ 0.36
USP39-206ENST00000448971 TXNRD2Q9NNW7 524 aa17.33■□□□□ 0.36
USP39-206ENST00000448971 DLL1O00548 723 aa17.32■□□□□ 0.36
USP39-206ENST00000448971 XRCC5P13010 732 aaKnown RBP17.32■□□□□ 0.36
USP39-206ENST00000448971 CYP2B6P20813 491 aa17.32■□□□□ 0.36
USP39-206ENST00000448971 Q3C1V9 767 aa17.32■□□□□ 0.36
USP39-206ENST00000448971 GPR153Q6NV75 609 aa17.32■□□□□ 0.36
USP39-206ENST00000448971 C7orf61Q8IZ16 206 aa17.32■□□□□ 0.36
USP39-206ENST00000448971 ACER1Q8TDN7 264 aa17.32■□□□□ 0.36
USP39-206ENST00000448971 ARHGEF10LQ9HCE6 1279 aa17.32■□□□□ 0.36
USP39-206ENST00000448971 RBPJLQ9UBG7 517 aa17.32■□□□□ 0.36
USP39-206ENST00000448971 ZMYND8Q9ULU4 1186 aaPredicted RBP17.32■□□□□ 0.36
USP39-206ENST00000448971 FOXP2O15409 715 aa17.31■□□□□ 0.36
USP39-206ENST00000448971 PRDM1O75626 825 aa17.31■□□□□ 0.36
USP39-206ENST00000448971 HERVK_113P62684 666 aa17.31■□□□□ 0.36
USP39-206ENST00000448971 ATP2B2Q01814 1243 aa17.31■□□□□ 0.36
USP39-206ENST00000448971 PDE4BQ07343 736 aa17.31■□□□□ 0.36
USP39-206ENST00000448971 USP6NLQ92738 828 aa17.31■□□□□ 0.36
USP39-206ENST00000448971 KIAA1683Q9H0B3 1180 aa17.31■□□□□ 0.36
USP39-206ENST00000448971 C11orf49Q9H6J7 331 aa17.31■□□□□ 0.36
USP39-206ENST00000448971 SH2D4AQ9H788 454 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms