RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 ENTPD3O75355 529 aa6.42□□□□□ -1.38
CDC42BPA-209ENST00000448940 GOLGA6L1Q8N7Z2 621 aa6.42□□□□□ -1.38
CDC42BPA-209ENST00000448940 PROCA1Q8NCQ7 364 aaPredicted RBP6.42□□□□□ -1.38
CDC42BPA-209ENST00000448940 NDUFV1P49821 464 aa6.41□□□□□ -1.38
CDC42BPA-209ENST00000448940 PALD1Q9ULE6 856 aa6.41□□□□□ -1.38
CDC42BPA-209ENST00000448940 MEGF6O75095 1541 aa6.41□□□□□ -1.38
CDC42BPA-209ENST00000448940 PDE6AP16499 860 aa6.41□□□□□ -1.38
CDC42BPA-209ENST00000448940 MCM2P49736 904 aa6.41□□□□□ -1.38
CDC42BPA-209ENST00000448940 GNASQ5JWF2 1037 aa6.41□□□□□ -1.38
CDC42BPA-209ENST00000448940 SLC10A5Q5PT55 438 aa6.41□□□□□ -1.38
CDC42BPA-209ENST00000448940 URGCPQ8TCY9 931 aa6.41□□□□□ -1.38
CDC42BPA-209ENST00000448940 HMG20BQ9P0W2 317 aa6.41□□□□□ -1.38
CDC42BPA-209ENST00000448940 AKT3Q9Y243 479 aa6.41□□□□□ -1.38
CDC42BPA-209ENST00000448940 HARSP12081 509 aaKnown RBP6.41□□□□□ -1.38
CDC42BPA-209ENST00000448940 CCDC144CPQ8IYA2 1237 aa6.41□□□□□ -1.38
CDC42BPA-209ENST00000448940 ZNF280CQ8ND82 737 aa6.41□□□□□ -1.38
CDC42BPA-209ENST00000448940 CEP131Q9UPN4 1083 aa6.41□□□□□ -1.38
CDC42BPA-209ENST00000448940 BMP3P12645 472 aa6.41□□□□□ -1.38
CDC42BPA-209ENST00000448940 HDLBPQ00341 1268 aaKnown RBP6.41□□□□□ -1.38
CDC42BPA-209ENST00000448940 MKRN4PQ13434 485 aaPredicted RBP6.41□□□□□ -1.38
CDC42BPA-209ENST00000448940 OPTNQ96CV9 577 aa6.41□□□□□ -1.38
CDC42BPA-209ENST00000448940 NAP1L4Q99733 375 aaKnown RBP6.41□□□□□ -1.38
CDC42BPA-209ENST00000448940 IRAK4Q9NWZ3 460 aa6.41□□□□□ -1.38
CDC42BPA-209ENST00000448940 UBR1Q8IWV7 1749 aa6.41□□□□□ -1.38
CDC42BPA-209ENST00000448940 DLL1O00548 723 aa6.41□□□□□ -1.38
CDC42BPA-209ENST00000448940 FDX1P10109 184 aa6.41□□□□□ -1.38
CDC42BPA-209ENST00000448940 DHX8Q14562 1220 aaKnown RBP6.41□□□□□ -1.38
CDC42BPA-209ENST00000448940 ZNF396Q96N95 335 aaPredicted RBP6.41□□□□□ -1.38
CDC42BPA-209ENST00000448940 GBP4Q96PP9 640 aa6.41□□□□□ -1.38
CDC42BPA-209ENST00000448940 BCCIPQ9P287 314 aaKnown RBP eCLIP6.41□□□□□ -1.38
CDC42BPA-209ENST00000448940 TRAF5O00463 557 aa6.41□□□□□ -1.38
CDC42BPA-209ENST00000448940 HOXA10P31260 410 aaPredicted RBP6.41□□□□□ -1.38
CDC42BPA-209ENST00000448940 HSP90AA2PQ14568 343 aaPredicted RBP6.41□□□□□ -1.38
CDC42BPA-209ENST00000448940 MKNK1Q9BUB5 465 aa6.41□□□□□ -1.38
CDC42BPA-209ENST00000448940 TBC1D2Q9BYX2 928 aa6.41□□□□□ -1.38
CDC42BPA-209ENST00000448940 COMMD10Q9Y6G5 202 aa6.41□□□□□ -1.38
CDC42BPA-209ENST00000448940 TPM1P09493 284 aa6.4□□□□□ -1.38
CDC42BPA-209ENST00000448940 FOXD4L6Q3SYB3 417 aaPredicted RBP6.4□□□□□ -1.38
CDC42BPA-209ENST00000448940 FOXD4L3Q6VB84 417 aaPredicted RBP6.4□□□□□ -1.38
CDC42BPA-209ENST00000448940 ANKRD13CQ8N6S4 541 aa6.4□□□□□ -1.38
CDC42BPA-209ENST00000448940 NLRP7Q8WX94 980 aa6.4□□□□□ -1.38
CDC42BPA-209ENST00000448940 GPR108Q9NPR9 543 aa6.4□□□□□ -1.38
CDC42BPA-209ENST00000448940 APOBRQ0VD83 1088 aa6.4□□□□□ -1.38
CDC42BPA-209ENST00000448940 HHIPL2Q6UWX4 724 aa6.4□□□□□ -1.38
CDC42BPA-209ENST00000448940 TRMT44Q8IYL2 757 aaKnown RBP6.4□□□□□ -1.38
CDC42BPA-209ENST00000448940 KBTBD3Q8NAB2 608 aa6.4□□□□□ -1.38
CDC42BPA-209ENST00000448940 ABHD8Q96I13 439 aa6.4□□□□□ -1.38
CDC42BPA-209ENST00000448940 ZSCAN31Q96LW9 406 aaPredicted RBP6.4□□□□□ -1.38
CDC42BPA-209ENST00000448940 APOL6Q9BWW8 343 aa6.4□□□□□ -1.38
CDC42BPA-209ENST00000448940 USP44Q9H0E7 712 aa6.4□□□□□ -1.38
CDC42BPA-209ENST00000448940 SYN1P17600 705 aa6.4□□□□□ -1.38
CDC42BPA-209ENST00000448940 CDAN1Q8IWY9 1227 aa6.4□□□□□ -1.38
CDC42BPA-209ENST00000448940 MYOCDQ8IZQ8 938 aa6.4□□□□□ -1.38
CDC42BPA-209ENST00000448940 ZFP91Q96JP5 570 aaPredicted RBP6.4□□□□□ -1.38
CDC42BPA-209ENST00000448940 HELLSQ9NRZ9 838 aa6.4□□□□□ -1.38
CDC42BPA-209ENST00000448940 CCDC39Q9UFE4 941 aa6.4□□□□□ -1.38
CDC42BPA-209ENST00000448940 LRRC47Q8N1G4 583 aaKnown RBP6.4□□□□□ -1.39
CDC42BPA-209ENST00000448940 LEO1Q8WVC0 666 aaPredicted RBP6.4□□□□□ -1.39
CDC42BPA-209ENST00000448940 LZTS2Q9BRK4 669 aa6.4□□□□□ -1.39
CDC42BPA-209ENST00000448940 PDGFDQ9GZP0 370 aaPredicted RBP6.4□□□□□ -1.39
CDC42BPA-209ENST00000448940 PXDNQ92626 1479 aa6.4□□□□□ -1.39
CDC42BPA-209ENST00000448940 ASB14A6NK59 587 aa6.4□□□□□ -1.39
CDC42BPA-209ENST00000448940 DDX39AO00148 427 aaKnown RBP6.4□□□□□ -1.39
CDC42BPA-209ENST00000448940 ERLIN2O94905 339 aa6.4□□□□□ -1.39
CDC42BPA-209ENST00000448940 MAP2K2P36507 400 aa6.4□□□□□ -1.39
CDC42BPA-209ENST00000448940 STIM1Q13586 685 aa6.4□□□□□ -1.39
CDC42BPA-209ENST00000448940 TM4SF1P30408 202 aa6.39□□□□□ -1.39
CDC42BPA-209ENST00000448940 GPATCH4Q5T3I0 446 aaKnown RBP6.39□□□□□ -1.39
CDC42BPA-209ENST00000448940 CC2D1AQ6P1N0 951 aaPredicted RBP6.39□□□□□ -1.39
CDC42BPA-209ENST00000448940 ADAT2Q7Z6V5 191 aaKnown RBP6.39□□□□□ -1.39
CDC42BPA-209ENST00000448940 FBXO11Q86XK2 927 aa6.39□□□□□ -1.39
CDC42BPA-209ENST00000448940 FAM13BQ9NYF5 915 aa6.39□□□□□ -1.39
CDC42BPA-209ENST00000448940 NCDNQ9UBB6 729 aa6.39□□□□□ -1.39
CDC42BPA-209ENST00000448940 GCOM1H8Y6P7 765 aaPredicted RBP6.39□□□□□ -1.39
CDC42BPA-209ENST00000448940 TBCAO75347 108 aaKnown RBP6.39□□□□□ -1.39
CDC42BPA-209ENST00000448940 POLR2MP0CAP2 368 aa6.39□□□□□ -1.39
CDC42BPA-209ENST00000448940 TOP1P11387 765 aaKnown RBP6.39□□□□□ -1.39
CDC42BPA-209ENST00000448940 PRDX5P30044 214 aa6.39□□□□□ -1.39
CDC42BPA-209ENST00000448940 GRK4P32298 578 aa6.39□□□□□ -1.39
CDC42BPA-209ENST00000448940 STAT3P40763 770 aa6.39□□□□□ -1.39
CDC42BPA-209ENST00000448940 SSR1P43307 286 aaKnown RBP6.39□□□□□ -1.39
CDC42BPA-209ENST00000448940 NEK1Q96PY6 1258 aa6.39□□□□□ -1.39
CDC42BPA-209ENST00000448940 SLC26A6Q9BXS9 759 aa6.39□□□□□ -1.39
CDC42BPA-209ENST00000448940 CAMTA1Q9Y6Y1 1673 aa6.39□□□□□ -1.39
CDC42BPA-209ENST00000448940 CTNND1O60716 968 aaKnown RBP6.39□□□□□ -1.39
CDC42BPA-209ENST00000448940 TTLL1O95922 423 aa6.39□□□□□ -1.39
CDC42BPA-209ENST00000448940 GJB1P08034 283 aa6.39□□□□□ -1.39
CDC42BPA-209ENST00000448940 CASTP20810 708 aaKnown RBP6.39□□□□□ -1.39
CDC42BPA-209ENST00000448940 GBP2P32456 591 aaPredicted RBP6.39□□□□□ -1.39
CDC42BPA-209ENST00000448940 COG2Q14746 738 aa6.39□□□□□ -1.39
CDC42BPA-209ENST00000448940 CEP85Q6P2H3 762 aa6.39□□□□□ -1.39
CDC42BPA-209ENST00000448940 CALML4Q96GE6 196 aa6.39□□□□□ -1.39
CDC42BPA-209ENST00000448940 CDHR1Q96JP9 859 aa6.39□□□□□ -1.39
CDC42BPA-209ENST00000448940 IGSF3O75054 1194 aa6.39□□□□□ -1.39
CDC42BPA-209ENST00000448940 MAPK4P31152 587 aa6.39□□□□□ -1.39
CDC42BPA-209ENST00000448940 MECOMQ03112 1051 aa6.39□□□□□ -1.39
CDC42BPA-209ENST00000448940 OLFM4Q6UX06 510 aa6.39□□□□□ -1.39
CDC42BPA-209ENST00000448940 SSX2IPQ9Y2D8 614 aa6.39□□□□□ -1.39
CDC42BPA-209ENST00000448940 VWDEQ8N2E2 1590 aa6.39□□□□□ -1.39
CDC42BPA-209ENST00000448940 KLF18A0A0U1RQI7 1052 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms