RNA–Protein interactions for RNA: ENST00000448789.2

RAB5B-202, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB5B, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-202ENST00000448789 MAP3K14Q99558 947 aa17.5■□□□□ 0.39
RAB5B-202ENST00000448789 TTLL1O95922 423 aa17.49■□□□□ 0.39
RAB5B-202ENST00000448789 GOLGA8HP0CJ92 632 aa17.49■□□□□ 0.39
RAB5B-202ENST00000448789 ATP2B2Q01814 1243 aa17.49■□□□□ 0.39
RAB5B-202ENST00000448789 TNFAIP1Q13829 316 aa17.49■□□□□ 0.39
RAB5B-202ENST00000448789 PKN1Q16512 942 aa17.49■□□□□ 0.39
RAB5B-202ENST00000448789 FBXO18Q8NFZ0 1043 aa17.49■□□□□ 0.39
RAB5B-202ENST00000448789 SHISA4Q96DD7 197 aa17.49■□□□□ 0.39
RAB5B-202ENST00000448789 RNF26Q9BY78 433 aaPredicted RBP17.49■□□□□ 0.39
RAB5B-202ENST00000448789 GGA3Q9NZ52 723 aa17.49■□□□□ 0.39
RAB5B-202ENST00000448789 PALM3A6NDB9 673 aaPredicted RBP17.48■□□□□ 0.39
RAB5B-202ENST00000448789 USP17L5A8MUK1 530 aa17.48■□□□□ 0.39
RAB5B-202ENST00000448789 EEF2P13639 858 aaKnown RBP17.48■□□□□ 0.39
RAB5B-202ENST00000448789 PDIA4P13667 645 aaKnown RBP17.48■□□□□ 0.39
RAB5B-202ENST00000448789 KIF5BP33176 963 aa17.48■□□□□ 0.39
RAB5B-202ENST00000448789 MAP3K10Q02779 954 aa17.48■□□□□ 0.39
RAB5B-202ENST00000448789 USP17L2Q6R6M4 530 aa17.48■□□□□ 0.39
RAB5B-202ENST00000448789 TMEM179Q6ZVK1 233 aa17.48■□□□□ 0.39
RAB5B-202ENST00000448789 TRIM22Q8IYM9 498 aa17.48■□□□□ 0.39
RAB5B-202ENST00000448789 DEFB129Q9H1M3 183 aa17.48■□□□□ 0.39
RAB5B-202ENST00000448789 CPVLQ9H3G5 476 aa17.48■□□□□ 0.39
RAB5B-202ENST00000448789 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.48■□□□□ 0.39
RAB5B-202ENST00000448789 TBC1D12O60347 775 aa17.47■□□□□ 0.39
RAB5B-202ENST00000448789 DEXIO95424 95 aa17.47■□□□□ 0.39
RAB5B-202ENST00000448789 PDHBP11177 359 aa17.47■□□□□ 0.39
RAB5B-202ENST00000448789 ICA1Q05084 483 aa17.47■□□□□ 0.39
RAB5B-202ENST00000448789 DNM1Q05193 864 aaKnown RBP17.47■□□□□ 0.39
RAB5B-202ENST00000448789 KRT40Q6A162 431 aa17.47■□□□□ 0.39
RAB5B-202ENST00000448789 GDPD2Q9HCC8 539 aa17.47■□□□□ 0.39
RAB5B-202ENST00000448789 CNPY2Q9Y2B0 182 aa17.47■□□□□ 0.39
RAB5B-202ENST00000448789 V9GY48 417 aaPredicted RBP17.47■□□□□ 0.39
RAB5B-202ENST00000448789 DDX11L8A8MPP1 907 aa17.47■□□□□ 0.39
RAB5B-202ENST00000448789 KIF28PB7ZC32 967 aa17.47■□□□□ 0.39
RAB5B-202ENST00000448789 PRPF3O43395 683 aaKnown RBP17.47■□□□□ 0.39
RAB5B-202ENST00000448789 CYTH3O43739 400 aa17.47■□□□□ 0.39
RAB5B-202ENST00000448789 VEGFAP15692 232 aaPredicted RBP17.47■□□□□ 0.39
RAB5B-202ENST00000448789 NBPF12Q5TAG4 269 aaPredicted RBP17.47■□□□□ 0.39
RAB5B-202ENST00000448789 PRAMEF18Q5VWM3 479 aa17.47■□□□□ 0.39
RAB5B-202ENST00000448789 PIBF1Q8WXW3 757 aa17.47■□□□□ 0.39
RAB5B-202ENST00000448789 KANSL2Q9H9L4 492 aa17.47■□□□□ 0.39
RAB5B-202ENST00000448789 NYAP2Q9P242 653 aa17.47■□□□□ 0.39
RAB5B-202ENST00000448789 FRMPD2Q68DX3 1309 aaPredicted RBP17.46■□□□□ 0.39
RAB5B-202ENST00000448789 SNHG28P0DPA3 235 aa17.46■□□□□ 0.39
RAB5B-202ENST00000448789 LMOD1P29536 600 aaPredicted RBP17.46■□□□□ 0.39
RAB5B-202ENST00000448789 ADARB2Q9NS39 739 aaKnown RBP17.46■□□□□ 0.39
RAB5B-202ENST00000448789 ZBTB21Q9ULJ3 1066 aa17.46■□□□□ 0.39
RAB5B-202ENST00000448789 PHF20L1A8MW92 1017 aa17.45■□□□□ 0.38
RAB5B-202ENST00000448789 GRIN3BO60391 1043 aa17.45■□□□□ 0.38
RAB5B-202ENST00000448789 PARP1P09874 1014 aaKnown RBP17.45■□□□□ 0.38
RAB5B-202ENST00000448789 KIF23Q02241 960 aaPredicted RBP17.45■□□□□ 0.38
RAB5B-202ENST00000448789 APOBEC3FQ8IUX4 373 aaKnown RBP17.45■□□□□ 0.38
RAB5B-202ENST00000448789 LMBRD1Q9NUN5 540 aa17.45■□□□□ 0.38
RAB5B-202ENST00000448789 KCNJ14Q9UNX9 436 aa17.45■□□□□ 0.38
RAB5B-202ENST00000448789 MYH4Q9Y623 1939 aa17.44■□□□□ 0.38
RAB5B-202ENST00000448789 SSC5DA1L4H1 1573 aa17.44■□□□□ 0.38
RAB5B-202ENST00000448789 A0A1W2PRG0 241 aa17.44■□□□□ 0.38
RAB5B-202ENST00000448789 KLRF2D3W0D1 207 aa17.44■□□□□ 0.38
RAB5B-202ENST00000448789 CAP2P40123 477 aa17.44■□□□□ 0.38
RAB5B-202ENST00000448789 AKAP17AQ02040 695 aaKnown RBP17.44■□□□□ 0.38
RAB5B-202ENST00000448789 CCDC84Q86UT8 332 aaPredicted RBP17.44■□□□□ 0.38
RAB5B-202ENST00000448789 WASF1Q92558 559 aa17.44■□□□□ 0.38
RAB5B-202ENST00000448789 MKL1Q969V6 931 aa17.44■□□□□ 0.38
RAB5B-202ENST00000448789 L3MBTL3Q96JM7 780 aaPredicted RBP17.44■□□□□ 0.38
RAB5B-202ENST00000448789 CABP5Q9NP86 173 aa17.44■□□□□ 0.38
RAB5B-202ENST00000448789 VPS54Q9P1Q0 977 aa17.44■□□□□ 0.38
RAB5B-202ENST00000448789 ATP6V1DQ9Y5K8 247 aa17.44■□□□□ 0.38
RAB5B-202ENST00000448789 GNAQP50148 359 aa17.43■□□□□ 0.38
RAB5B-202ENST00000448789 ZNF543Q08ER8 600 aa17.43■□□□□ 0.38
RAB5B-202ENST00000448789 PPP4R3BQ5MIZ7 849 aa17.43■□□□□ 0.38
RAB5B-202ENST00000448789 DLK2Q6UY11 383 aa17.43■□□□□ 0.38
RAB5B-202ENST00000448789 ACER1Q8TDN7 264 aa17.43■□□□□ 0.38
RAB5B-202ENST00000448789 ANP32EQ9BTT0 268 aa17.43■□□□□ 0.38
RAB5B-202ENST00000448789 UBA5Q9GZZ9 404 aa17.43■□□□□ 0.38
RAB5B-202ENST00000448789 ZSCAN16Q9H4T2 348 aaPredicted RBP17.43■□□□□ 0.38
RAB5B-202ENST00000448789 GPCPD1Q9NPB8 672 aa17.43■□□□□ 0.38
RAB5B-202ENST00000448789 FIBPO43427 364 aa17.42■□□□□ 0.38
RAB5B-202ENST00000448789 PRPF40AO75400 957 aaKnown RBP17.42■□□□□ 0.38
RAB5B-202ENST00000448789 NCLP19338 710 aaKnown RBP17.42■□□□□ 0.38
RAB5B-202ENST00000448789 ECE1P42892 770 aa17.42■□□□□ 0.38
RAB5B-202ENST00000448789 TTBK2Q6IQ55 1244 aa17.42■□□□□ 0.38
RAB5B-202ENST00000448789 SPZ1Q9BXG8 430 aa17.42■□□□□ 0.38
RAB5B-202ENST00000448789 FZD1Q9UP38 647 aa17.42■□□□□ 0.38
RAB5B-202ENST00000448789 BAZ2BQ9UIF8 2168 aaKnown RBP17.42■□□□□ 0.38
RAB5B-202ENST00000448789 MYH6P13533 1939 aa17.42■□□□□ 0.38
RAB5B-202ENST00000448789 GOLGA6L22H0YM25 854 aa17.42■□□□□ 0.38
RAB5B-202ENST00000448789 MMP1P03956 469 aa17.42■□□□□ 0.38
RAB5B-202ENST00000448789 SCG2P13521 617 aa17.42■□□□□ 0.38
RAB5B-202ENST00000448789 TRIM29Q14134 588 aa17.42■□□□□ 0.38
RAB5B-202ENST00000448789 PFKFB3Q16875 520 aaPredicted RBP17.42■□□□□ 0.38
RAB5B-202ENST00000448789 CCDC96Q2M329 555 aa17.42■□□□□ 0.38
RAB5B-202ENST00000448789 ASPRV1Q53RT3 343 aa17.42■□□□□ 0.38
RAB5B-202ENST00000448789 DPY19L2Q6NUT2 758 aa17.42■□□□□ 0.38
RAB5B-202ENST00000448789 RGS22Q8NE09 1264 aa17.42■□□□□ 0.38
RAB5B-202ENST00000448789 LZTS2Q9BRK4 669 aa17.42■□□□□ 0.38
RAB5B-202ENST00000448789 FTOQ9C0B1 505 aaKnown RBP eCLIP17.42■□□□□ 0.38
RAB5B-202ENST00000448789 TFIP11Q9UBB9 837 aaKnown RBP17.42■□□□□ 0.38
RAB5B-202ENST00000448789 PITPNM2Q9BZ72 1349 aa17.41■□□□□ 0.38
RAB5B-202ENST00000448789 ZC3H4Q9UPT8 1303 aaKnown RBP17.41■□□□□ 0.38
RAB5B-202ENST00000448789 GLTPD2A6NH11 291 aa17.41■□□□□ 0.38
RAB5B-202ENST00000448789 NDUFB10O96000 172 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms