RNA–Protein interactions for RNA: ENST00000448223.6

SMC6-207, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,233 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-207ENST00000448223 HMGB1P1B2RPK0 211 aaPredicted RBP10.23□□□□□ -0.77
SMC6-207ENST00000448223 NECTIN1Q15223 517 aa10.23□□□□□ -0.77
SMC6-207ENST00000448223 DHX32Q7L7V1 743 aaKnown RBP10.23□□□□□ -0.77
SMC6-207ENST00000448223 RPGRIP1Q96KN7 1286 aa10.23□□□□□ -0.77
SMC6-207ENST00000448223 ZKSCAN3Q9BRR0 538 aa10.23□□□□□ -0.77
SMC6-207ENST00000448223 PLCB1Q9NQ66 1216 aa10.23□□□□□ -0.77
SMC6-207ENST00000448223 NOP53Q9NZM5 478 aaKnown RBP10.23□□□□□ -0.77
SMC6-207ENST00000448223 HMG20BQ9P0W2 317 aa10.23□□□□□ -0.77
SMC6-207ENST00000448223 ZNF711Q9Y462 761 aa10.23□□□□□ -0.77
SMC6-207ENST00000448223 DLG5Q8TDM6 1919 aa10.23□□□□□ -0.77
SMC6-207ENST00000448223 MINDY4BA8MYZ0 360 aa10.22□□□□□ -0.77
SMC6-207ENST00000448223 TAF5LO75529 589 aa10.22□□□□□ -0.77
SMC6-207ENST00000448223 SNRPA1P09661 255 aaKnown RBP10.22□□□□□ -0.77
SMC6-207ENST00000448223 CA8P35219 290 aa10.22□□□□□ -0.77
SMC6-207ENST00000448223 SCRN1Q12765 414 aa10.22□□□□□ -0.77
SMC6-207ENST00000448223 EIF2AQ9BY44 585 aaKnown RBP10.22□□□□□ -0.77
SMC6-207ENST00000448223 CLUL1Q15846 466 aa10.22□□□□□ -0.77
SMC6-207ENST00000448223 PI16Q6UXB8 463 aa10.22□□□□□ -0.77
SMC6-207ENST00000448223 CEP70Q8NHQ1 597 aa10.22□□□□□ -0.77
SMC6-207ENST00000448223 RAB34Q9BZG1 259 aa10.22□□□□□ -0.77
SMC6-207ENST00000448223 KCNF1Q9H3M0 494 aa10.22□□□□□ -0.77
SMC6-207ENST00000448223 SAMM50Q9Y512 469 aa10.22□□□□□ -0.77
SMC6-207ENST00000448223 TACC3Q9Y6A5 838 aa10.22□□□□□ -0.77
SMC6-207ENST00000448223 CCHCR1Q8TD31 782 aa10.22□□□□□ -0.77
SMC6-207ENST00000448223 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.22□□□□□ -0.77
SMC6-207ENST00000448223 PHKBQ93100 1093 aa10.22□□□□□ -0.77
SMC6-207ENST00000448223 DLC1Q96QB1 1528 aa10.22□□□□□ -0.77
SMC6-207ENST00000448223 A0A0G2JLW4 131 aa10.22□□□□□ -0.77
SMC6-207ENST00000448223 NEURL1BA8MQ27 555 aa10.22□□□□□ -0.77
SMC6-207ENST00000448223 POLD1P28340 1107 aa10.22□□□□□ -0.77
SMC6-207ENST00000448223 MYL5Q02045 173 aa10.22□□□□□ -0.77
SMC6-207ENST00000448223 CFAP61Q8NHU2 1237 aa10.22□□□□□ -0.77
SMC6-207ENST00000448223 DACT3Q96B18 629 aaPredicted RBP10.22□□□□□ -0.77
SMC6-207ENST00000448223 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.22□□□□□ -0.77
SMC6-207ENST00000448223 PPP1R12AO14974 1030 aaPredicted RBP10.21□□□□□ -0.77
SMC6-207ENST00000448223 LRRC24Q50LG9 513 aa10.21□□□□□ -0.77
SMC6-207ENST00000448223 HHATQ5VTY9 493 aa10.21□□□□□ -0.77
SMC6-207ENST00000448223 LDHAL6AQ6ZMR3 332 aa10.21□□□□□ -0.77
SMC6-207ENST00000448223 BICD1Q96G01 975 aa10.21□□□□□ -0.77
SMC6-207ENST00000448223 PGBD1Q96JS3 809 aa10.21□□□□□ -0.77
SMC6-207ENST00000448223 IWS1Q96ST2 819 aa10.21□□□□□ -0.77
SMC6-207ENST00000448223 DYTNA2CJ06 578 aa10.21□□□□□ -0.77
SMC6-207ENST00000448223 ESRRGP62508 458 aa10.21□□□□□ -0.77
SMC6-207ENST00000448223 SIRT1Q96EB6 747 aa10.21□□□□□ -0.77
SMC6-207ENST00000448223 MMRN2Q9H8L6 949 aa10.21□□□□□ -0.77
SMC6-207ENST00000448223 UTP11Q9Y3A2 253 aaKnown RBP10.21□□□□□ -0.77
SMC6-207ENST00000448223 UBXN1Q04323 297 aa10.21□□□□□ -0.78
SMC6-207ENST00000448223 TEX11Q8IYF3 940 aa10.21□□□□□ -0.78
SMC6-207ENST00000448223 SLC26A6Q9BXS9 759 aa10.21□□□□□ -0.78
SMC6-207ENST00000448223 PUS3Q9BZE2 481 aaKnown RBP10.21□□□□□ -0.78
SMC6-207ENST00000448223 MAN1A2O60476 641 aa10.21□□□□□ -0.78
SMC6-207ENST00000448223 CCDC144BQ3MJ40 725 aa10.21□□□□□ -0.78
SMC6-207ENST00000448223 HIBCHQ6NVY1 386 aaPredicted RBP10.21□□□□□ -0.78
SMC6-207ENST00000448223 TTLL7Q6ZT98 887 aa10.21□□□□□ -0.78
SMC6-207ENST00000448223 CMTR1Q8N1G2 835 aaKnown RBP10.21□□□□□ -0.78
SMC6-207ENST00000448223 FERMT1Q9BQL6 677 aa10.21□□□□□ -0.78
SMC6-207ENST00000448223 USP27XA6NNY8 438 aa10.2□□□□□ -0.78
SMC6-207ENST00000448223 SPTLC2O15270 562 aa10.2□□□□□ -0.78
SMC6-207ENST00000448223 TSPOAP1O95153 1857 aa10.2□□□□□ -0.78
SMC6-207ENST00000448223 IFNL2Q8IZJ0 200 aa10.2□□□□□ -0.78
SMC6-207ENST00000448223 AIDAQ96BJ3 306 aa10.2□□□□□ -0.78
SMC6-207ENST00000448223 TM6SF1Q9BZW5 370 aa10.2□□□□□ -0.78
SMC6-207ENST00000448223 NDC80O14777 642 aa10.2□□□□□ -0.78
SMC6-207ENST00000448223 PSMA7O14818 248 aa10.2□□□□□ -0.78
SMC6-207ENST00000448223 STX17P56962 302 aa10.2□□□□□ -0.78
SMC6-207ENST00000448223 TOB2Q14106 344 aaPredicted RBP10.2□□□□□ -0.78
SMC6-207ENST00000448223 NUTM2AQ8IVF1 878 aaPredicted RBP10.2□□□□□ -0.78
SMC6-207ENST00000448223 CCDC197Q8NCU1 140 aa10.2□□□□□ -0.78
SMC6-207ENST00000448223 TBC1D5Q92609 795 aa10.2□□□□□ -0.78
SMC6-207ENST00000448223 CLTCQ00610 1675 aaKnown RBP10.2□□□□□ -0.78
SMC6-207ENST00000448223 hCG_1642624A0A1W2PR95 340 aa10.2□□□□□ -0.78
SMC6-207ENST00000448223 ARHGAP42A6NI28 874 aa10.2□□□□□ -0.78
SMC6-207ENST00000448223 ETF1P62495 437 aaKnown RBP10.2□□□□□ -0.78
SMC6-207ENST00000448223 NUDCD3Q8IVD9 361 aa10.2□□□□□ -0.78
SMC6-207ENST00000448223 AIFM3Q96NN9 605 aa10.2□□□□□ -0.78
SMC6-207ENST00000448223 ALG1Q9BT22 464 aa10.2□□□□□ -0.78
SMC6-207ENST00000448223 DDX41Q9UJV9 622 aaKnown RBP10.2□□□□□ -0.78
SMC6-207ENST00000448223 APOEP02649 317 aa10.2□□□□□ -0.78
SMC6-207ENST00000448223 STX2P32856 288 aa10.2□□□□□ -0.78
SMC6-207ENST00000448223 UBA7P41226 1012 aa10.2□□□□□ -0.78
SMC6-207ENST00000448223 AFMP43652 599 aa10.2□□□□□ -0.78
SMC6-207ENST00000448223 SSRP1Q08945 709 aaKnown RBP10.2□□□□□ -0.78
SMC6-207ENST00000448223 RBM26Q5T8P6 1007 aaKnown RBP10.2□□□□□ -0.78
SMC6-207ENST00000448223 SLC9C2Q5TAH2 1124 aa10.2□□□□□ -0.78
SMC6-207ENST00000448223 SLC30A9Q6PML9 568 aa10.2□□□□□ -0.78
SMC6-207ENST00000448223 ZNF710Q8N1W2 664 aa10.2□□□□□ -0.78
SMC6-207ENST00000448223 RABGGTAQ92696 567 aa10.2□□□□□ -0.78
SMC6-207ENST00000448223 HOMER3Q9NSC5 361 aa10.2□□□□□ -0.78
SMC6-207ENST00000448223 CHCHD3Q9NX63 227 aaKnown RBP10.2□□□□□ -0.78
SMC6-207ENST00000448223 EVI5O60447 810 aa10.2□□□□□ -0.78
SMC6-207ENST00000448223 IGKV5-2P06315 115 aa10.2□□□□□ -0.78
SMC6-207ENST00000448223 TROVE2P10155 538 aaKnown RBP eCLIP10.2□□□□□ -0.78
SMC6-207ENST00000448223 IFIT5Q13325 482 aaKnown RBP10.2□□□□□ -0.78
SMC6-207ENST00000448223 ST13P4Q8IZP2 240 aaPredicted RBP10.2□□□□□ -0.78
SMC6-207ENST00000448223 RMDN2Q96LZ7 410 aa10.2□□□□□ -0.78
SMC6-207ENST00000448223 PLEKHA4Q9H4M7 779 aa10.2□□□□□ -0.78
SMC6-207ENST00000448223 AXIN2Q9Y2T1 843 aa10.2□□□□□ -0.78
SMC6-207ENST00000448223 hCG_2014768A0A024R1R8 64 aa10.19□□□□□ -0.78
SMC6-207ENST00000448223 IFIT3O14879 490 aaKnown RBP10.19□□□□□ -0.78
SMC6-207ENST00000448223 FLOT1O75955 427 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms