RNA–Protein interactions for RNA: ENST00000448012.6

NPIPB3-202, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 1 (best) BASIC

Gene NPIPB3, Length 1,216 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-202ENST00000448012 HDAC1Q13547 482 aaPredicted RBP13.09□□□□□ -0.31
NPIPB3-202ENST00000448012 MFSD14CQ5VZR4 134 aa13.09□□□□□ -0.31
NPIPB3-202ENST00000448012 LBX2Q6XYB7 198 aa13.09□□□□□ -0.31
NPIPB3-202ENST00000448012 NAV1Q8NEY1 1877 aa13.09□□□□□ -0.31
NPIPB3-202ENST00000448012 OSBP2Q969R2 916 aa13.09□□□□□ -0.31
NPIPB3-202ENST00000448012 APBA2Q99767 749 aa13.09□□□□□ -0.31
NPIPB3-202ENST00000448012 VCPKMTQ9H867 229 aa13.09□□□□□ -0.31
NPIPB3-202ENST00000448012 SLC5A4Q9NY91 659 aa13.09□□□□□ -0.31
NPIPB3-202ENST00000448012 TMX2Q9Y320 296 aa13.09□□□□□ -0.31
NPIPB3-202ENST00000448012 NR2E3Q9Y5X4 410 aa13.09□□□□□ -0.31
NPIPB3-202ENST00000448012 PTPRFP10586 1907 aa13.09□□□□□ -0.31
NPIPB3-202ENST00000448012 SLC15A5A6NIM6 579 aa13.08□□□□□ -0.32
NPIPB3-202ENST00000448012 SPDYE16A6NNV3 312 aaPredicted RBP13.08□□□□□ -0.32
NPIPB3-202ENST00000448012 PATL2C9JE40 543 aaKnown RBP13.08□□□□□ -0.32
NPIPB3-202ENST00000448012 WDR46O15213 610 aaKnown RBP13.08□□□□□ -0.32
NPIPB3-202ENST00000448012 CHGBP05060 677 aa13.08□□□□□ -0.32
NPIPB3-202ENST00000448012 EVX2Q03828 476 aa13.08□□□□□ -0.32
NPIPB3-202ENST00000448012 PDE4BQ07343 736 aa13.08□□□□□ -0.32
NPIPB3-202ENST00000448012 MAP2K5Q13163 448 aa13.08□□□□□ -0.32
NPIPB3-202ENST00000448012 PLS1Q14651 629 aa13.08□□□□□ -0.32
NPIPB3-202ENST00000448012 Q3C1V9 767 aa13.08□□□□□ -0.32
NPIPB3-202ENST00000448012 SPICE1Q8N0Z3 855 aa13.08□□□□□ -0.32
NPIPB3-202ENST00000448012 STK11IPQ8N1F8 1099 aa13.08□□□□□ -0.32
NPIPB3-202ENST00000448012 NAPBQ9H115 298 aa13.08□□□□□ -0.32
NPIPB3-202ENST00000448012 PORCNQ9H237 461 aa13.08□□□□□ -0.32
NPIPB3-202ENST00000448012 CTDP1Q9Y5B0 961 aaPredicted RBP13.08□□□□□ -0.32
NPIPB3-202ENST00000448012 CDK5RAP2Q96SN8 1893 aa13.08□□□□□ -0.32
NPIPB3-202ENST00000448012 A0A1W2PRG0 241 aa13.07□□□□□ -0.32
NPIPB3-202ENST00000448012 GSG1L2A8MUP6 293 aa13.07□□□□□ -0.32
NPIPB3-202ENST00000448012 PEX10O60683 326 aa13.07□□□□□ -0.32
NPIPB3-202ENST00000448012 EEF2P13639 858 aaKnown RBP13.07□□□□□ -0.32
NPIPB3-202ENST00000448012 PRKAR2AP13861 404 aaKnown RBP13.07□□□□□ -0.32
NPIPB3-202ENST00000448012 PPP4R3BQ5MIZ7 849 aa13.07□□□□□ -0.32
NPIPB3-202ENST00000448012 NECAB2Q7Z6G3 386 aa13.07□□□□□ -0.32
NPIPB3-202ENST00000448012 DPP9Q86TI2 863 aa13.07□□□□□ -0.32
NPIPB3-202ENST00000448012 ANKLE1Q8NAG6 615 aa13.07□□□□□ -0.32
NPIPB3-202ENST00000448012 PI4K2BQ8TCG2 481 aa13.07□□□□□ -0.32
NPIPB3-202ENST00000448012 EVI5LQ96CN4 794 aa13.07□□□□□ -0.32
NPIPB3-202ENST00000448012 SHISA4Q96DD7 197 aa13.07□□□□□ -0.32
NPIPB3-202ENST00000448012 PAK6Q9NQU5 681 aaPredicted RBP13.07□□□□□ -0.32
NPIPB3-202ENST00000448012 RBBP6Q7Z6E9 1792 aaKnown RBP13.07□□□□□ -0.32
NPIPB3-202ENST00000448012 KIAA0100Q14667 2235 aaKnown RBP13.07□□□□□ -0.32
NPIPB3-202ENST00000448012 STRNO43815 780 aa13.06□□□□□ -0.32
NPIPB3-202ENST00000448012 PTPREP23469 700 aa13.06□□□□□ -0.32
NPIPB3-202ENST00000448012 MORN1Q5T089 497 aa13.06□□□□□ -0.32
NPIPB3-202ENST00000448012 NCAPG2Q86XI2 1143 aa13.06□□□□□ -0.32
NPIPB3-202ENST00000448012 IFNL3Q8IZI9 196 aa13.06□□□□□ -0.32
NPIPB3-202ENST00000448012 SHCBP1Q8NEM2 672 aa13.06□□□□□ -0.32
NPIPB3-202ENST00000448012 TRIB2Q92519 343 aa13.06□□□□□ -0.32
NPIPB3-202ENST00000448012 SPATC1LQ9H0A9 340 aa13.06□□□□□ -0.32
NPIPB3-202ENST00000448012 MROH8Q9H579 483 aa13.06□□□□□ -0.32
NPIPB3-202ENST00000448012 PDE4DIPQ5VU43 2346 aa13.06□□□□□ -0.32
NPIPB3-202ENST00000448012 M0R2C6 588 aa13.05□□□□□ -0.32
NPIPB3-202ENST00000448012 EVI5O60447 810 aa13.05□□□□□ -0.32
NPIPB3-202ENST00000448012 CNMDO75829 334 aa13.05□□□□□ -0.32
NPIPB3-202ENST00000448012 SLC25A27O95847 323 aa13.05□□□□□ -0.32
NPIPB3-202ENST00000448012 DSG3P32926 999 aa13.05□□□□□ -0.32
NPIPB3-202ENST00000448012 COPB2P35606 906 aa13.05□□□□□ -0.32
NPIPB3-202ENST00000448012 ZMYM1Q5SVZ6 1142 aa13.05□□□□□ -0.32
NPIPB3-202ENST00000448012 CLEC10AQ8IUN9 316 aa13.05□□□□□ -0.32
NPIPB3-202ENST00000448012 OTUD7AQ8TE49 926 aaPredicted RBP13.05□□□□□ -0.32
NPIPB3-202ENST00000448012 BTBD7Q9P203 1132 aa13.05□□□□□ -0.32
NPIPB3-202ENST00000448012 ISY1Q9ULR0 285 aaKnown RBP13.05□□□□□ -0.32
NPIPB3-202ENST00000448012 DDX60LQ5H9U9 1706 aaKnown RBP13.05□□□□□ -0.32
NPIPB3-202ENST00000448012 MGAMO43451 1857 aa13.04□□□□□ -0.32
NPIPB3-202ENST00000448012 TRIM6-TRIM34B2RNG4 842 aa13.04□□□□□ -0.32
NPIPB3-202ENST00000448012 TSPY3P0CV98 308 aa13.04□□□□□ -0.32
NPIPB3-202ENST00000448012 TSPY8P0CW00 308 aa13.04□□□□□ -0.32
NPIPB3-202ENST00000448012 RASA1P20936 1047 aa13.04□□□□□ -0.32
NPIPB3-202ENST00000448012 CNGA1P29973 690 aa13.04□□□□□ -0.32
NPIPB3-202ENST00000448012 PDE1AP54750 535 aa13.04□□□□□ -0.32
NPIPB3-202ENST00000448012 TICAM2Q86XR7 235 aa13.04□□□□□ -0.32
NPIPB3-202ENST00000448012 ATG4CQ96DT6 458 aa13.04□□□□□ -0.32
NPIPB3-202ENST00000448012 MOV10L1Q9BXT6 1211 aaKnown RBP13.04□□□□□ -0.32
NPIPB3-202ENST00000448012 LNPKQ9C0E8 428 aa13.04□□□□□ -0.32
NPIPB3-202ENST00000448012 NBPF3Q9H094 633 aa13.04□□□□□ -0.32
NPIPB3-202ENST00000448012 CRISPLD2Q9H0B8 497 aa13.04□□□□□ -0.32
NPIPB3-202ENST00000448012 RNF216Q9NWF9 866 aaPredicted RBP13.04□□□□□ -0.32
NPIPB3-202ENST00000448012 NYAP2Q9P242 653 aa13.04□□□□□ -0.32
NPIPB3-202ENST00000448012 STAP2Q9UGK3 403 aa13.04□□□□□ -0.32
NPIPB3-202ENST00000448012 ROBO3Q96MS0 1386 aa13.04□□□□□ -0.32
NPIPB3-202ENST00000448012 H0YGN5 161 aa13.03□□□□□ -0.32
NPIPB3-202ENST00000448012 MSCO60682 206 aa13.03□□□□□ -0.32
NPIPB3-202ENST00000448012 FCER1AP12319 257 aa13.03□□□□□ -0.32
NPIPB3-202ENST00000448012 ERCC3P19447 782 aa13.03□□□□□ -0.32
NPIPB3-202ENST00000448012 MFAP1P55081 439 aaKnown RBP13.03□□□□□ -0.32
NPIPB3-202ENST00000448012 TRIM32Q13049 653 aa13.03□□□□□ -0.32
NPIPB3-202ENST00000448012 GRB14Q14449 540 aa13.03□□□□□ -0.32
NPIPB3-202ENST00000448012 FAM83BQ5T0W9 1011 aa13.03□□□□□ -0.32
NPIPB3-202ENST00000448012 B4GALNT3Q6L9W6 998 aa13.03□□□□□ -0.32
NPIPB3-202ENST00000448012 USP6NLQ92738 828 aa13.03□□□□□ -0.32
NPIPB3-202ENST00000448012 PAWRQ96IZ0 340 aaKnown RBP13.03□□□□□ -0.32
NPIPB3-202ENST00000448012 SEC62Q99442 399 aaKnown RBP13.03□□□□□ -0.32
NPIPB3-202ENST00000448012 EPB41L4AQ9HCS5 686 aaPredicted RBP13.03□□□□□ -0.32
NPIPB3-202ENST00000448012 HELLSQ9NRZ9 838 aa13.03□□□□□ -0.32
NPIPB3-202ENST00000448012 CLIP2Q9UDT6 1046 aa13.03□□□□□ -0.32
NPIPB3-202ENST00000448012 F5H6K3 240 aa13.02□□□□□ -0.33
NPIPB3-202ENST00000448012 SMIM22K7EJ46 135 aa13.02□□□□□ -0.33
NPIPB3-202ENST00000448012 ZBED4O75132 1171 aa13.02□□□□□ -0.33
NPIPB3-202ENST00000448012 PRDM1O75626 825 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms