RNA–Protein interactions for RNA: ENST00000447683.2

OTUB1-204, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 2

Gene OTUB1, Length 2,315 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-204ENST00000447683 FERMT2Q96AC1 680 aa18.61■□□□□ 0.57
OTUB1-204ENST00000447683 RBM17Q96I25 401 aaKnown RBP18.61■□□□□ 0.57
OTUB1-204ENST00000447683 RTFDC1Q9BY42 306 aaPredicted RBP18.61■□□□□ 0.57
OTUB1-204ENST00000447683 MAN1B1Q9UKM7 699 aa18.61■□□□□ 0.57
OTUB1-204ENST00000447683 DDX60LQ5H9U9 1706 aaKnown RBP18.61■□□□□ 0.57
OTUB1-204ENST00000447683 HOXA10P31260 410 aaPredicted RBP18.61■□□□□ 0.57
OTUB1-204ENST00000447683 DYNLL2Q96FJ2 89 aa18.61■□□□□ 0.57
OTUB1-204ENST00000447683 KAT14Q9H8E8 782 aa18.61■□□□□ 0.57
OTUB1-204ENST00000447683 WNT7AO00755 349 aa18.6■□□□□ 0.57
OTUB1-204ENST00000447683 BBOX1O75936 387 aa18.6■□□□□ 0.57
OTUB1-204ENST00000447683 UFL1O94874 794 aa18.6■□□□□ 0.57
OTUB1-204ENST00000447683 PRR29P0C7W0 189 aa18.6■□□□□ 0.57
OTUB1-204ENST00000447683 SKILP12757 684 aa18.6■□□□□ 0.57
OTUB1-204ENST00000447683 TRIML1Q8N9V2 468 aa18.6■□□□□ 0.57
OTUB1-204ENST00000447683 SPATA20Q8TB22 786 aa18.6■□□□□ 0.57
OTUB1-204ENST00000447683 TMEM51Q9NW97 253 aa18.6■□□□□ 0.57
OTUB1-204ENST00000447683 GGA1Q9UJY5 639 aa18.6■□□□□ 0.57
OTUB1-204ENST00000447683 LRRC37AA6NMS7 1700 aa18.6■□□□□ 0.57
OTUB1-204ENST00000447683 LTBP1Q14766 1721 aa18.6■□□□□ 0.57
OTUB1-204ENST00000447683 TRAPPC10P48553 1259 aa18.6■□□□□ 0.57
OTUB1-204ENST00000447683 MORC3Q14149 939 aa18.6■□□□□ 0.57
OTUB1-204ENST00000447683 DHX8Q14562 1220 aaKnown RBP18.6■□□□□ 0.57
OTUB1-204ENST00000447683 NOM1Q5C9Z4 860 aaKnown RBP18.6■□□□□ 0.57
OTUB1-204ENST00000447683 TTC38Q5R3I4 469 aa18.6■□□□□ 0.57
OTUB1-204ENST00000447683 AMOTL1Q8IY63 956 aa18.6■□□□□ 0.57
OTUB1-204ENST00000447683 TGFBRAP1Q8WUH2 860 aa18.6■□□□□ 0.57
OTUB1-204ENST00000447683 CCDC94Q9BW85 323 aaPredicted RBP18.6■□□□□ 0.57
OTUB1-204ENST00000447683 KCND1Q9NSA2 647 aa18.6■□□□□ 0.57
OTUB1-204ENST00000447683 ATP1A3P13637 1013 aa18.59■□□□□ 0.57
OTUB1-204ENST00000447683 GRM4Q14833 912 aa18.59■□□□□ 0.57
OTUB1-204ENST00000447683 SLC4A8Q2Y0W8 1093 aa18.59■□□□□ 0.57
OTUB1-204ENST00000447683 PNMA1Q8ND90 353 aa18.59■□□□□ 0.57
OTUB1-204ENST00000447683 GPR75-ASB3A0A0A6YYF3 556 aa18.58■□□□□ 0.57
OTUB1-204ENST00000447683 NLRP5P59047 1200 aa18.58■□□□□ 0.57
OTUB1-204ENST00000447683 ATP2C1P98194 919 aaPredicted RBP18.58■□□□□ 0.57
OTUB1-204ENST00000447683 MLKLQ8NB16 471 aa18.58■□□□□ 0.57
OTUB1-204ENST00000447683 CCDC150Q8NCX0 1101 aa18.58■□□□□ 0.57
OTUB1-204ENST00000447683 SMARCE1Q969G3 411 aa18.58■□□□□ 0.57
OTUB1-204ENST00000447683 MKNK2Q9HBH9 465 aa18.58■□□□□ 0.57
OTUB1-204ENST00000447683 SH3GLB2Q9NR46 395 aa18.58■□□□□ 0.57
OTUB1-204ENST00000447683 VEGFAP15692 232 aaPredicted RBP18.58■□□□□ 0.56
OTUB1-204ENST00000447683 ZSCAN20P17040 1043 aaPredicted RBP18.58■□□□□ 0.56
OTUB1-204ENST00000447683 TMC6Q7Z403 805 aa18.58■□□□□ 0.56
OTUB1-204ENST00000447683 PDILTQ8N807 584 aa18.58■□□□□ 0.56
OTUB1-204ENST00000447683 FAM163AQ96GL9 167 aaPredicted RBP18.58■□□□□ 0.56
OTUB1-204ENST00000447683 CRAMP1Q96RY5 1269 aa18.58■□□□□ 0.56
OTUB1-204ENST00000447683 ZHX1Q9UKY1 873 aaPredicted RBP18.58■□□□□ 0.56
OTUB1-204ENST00000447683 MYH1P12882 1939 aa18.58■□□□□ 0.56
OTUB1-204ENST00000447683 A0A087X0B3 334 aa18.57■□□□□ 0.56
OTUB1-204ENST00000447683 KLRG2A4D1S0 409 aaPredicted RBP18.57■□□□□ 0.56
OTUB1-204ENST00000447683 GNAQP50148 359 aa18.57■□□□□ 0.56
OTUB1-204ENST00000447683 PLCD1P51178 756 aa18.57■□□□□ 0.56
OTUB1-204ENST00000447683 ZNF174Q15697 407 aa18.57■□□□□ 0.56
OTUB1-204ENST00000447683 SH3RF1Q7Z6J0 888 aa18.57■□□□□ 0.56
OTUB1-204ENST00000447683 FOCADQ5VW36 1801 aa18.57■□□□□ 0.56
OTUB1-204ENST00000447683 BRWD3Q6RI45 1802 aa18.57■□□□□ 0.56
OTUB1-204ENST00000447683 CBFA2T2O43439 604 aa18.57■□□□□ 0.56
OTUB1-204ENST00000447683 CALML3P27482 149 aa18.57■□□□□ 0.56
OTUB1-204ENST00000447683 BTDP43251 543 aa18.57■□□□□ 0.56
OTUB1-204ENST00000447683 DDR1Q08345 913 aa18.57■□□□□ 0.56
OTUB1-204ENST00000447683 ZNF444Q8N0Y2 327 aaPredicted RBP18.57■□□□□ 0.56
OTUB1-204ENST00000447683 EPSTI1Q96J88 318 aa18.57■□□□□ 0.56
OTUB1-204ENST00000447683 C16orf45Q96MC5 204 aaPredicted RBP18.57■□□□□ 0.56
OTUB1-204ENST00000447683 DACH1Q9UI36 760 aa18.57■□□□□ 0.56
OTUB1-204ENST00000447683 USP17L3A6NCW0 530 aa18.56■□□□□ 0.56
OTUB1-204ENST00000447683 USP17L4A6NCW7 530 aa18.56■□□□□ 0.56
OTUB1-204ENST00000447683 SLFN14P0C7P3 912 aa18.56■□□□□ 0.56
OTUB1-204ENST00000447683 TSPY3P0CV98 308 aa18.56■□□□□ 0.56
OTUB1-204ENST00000447683 TSPY8P0CW00 308 aa18.56■□□□□ 0.56
OTUB1-204ENST00000447683 RASA1P20936 1047 aa18.56■□□□□ 0.56
OTUB1-204ENST00000447683 PTGDRQ13258 359 aa18.56■□□□□ 0.56
OTUB1-204ENST00000447683 ARMCX5Q6P1M9 558 aa18.56■□□□□ 0.56
OTUB1-204ENST00000447683 USP17L1Q7RTZ2 530 aa18.56■□□□□ 0.56
OTUB1-204ENST00000447683 MAPKAPK5Q8IW41 473 aa18.56■□□□□ 0.56
OTUB1-204ENST00000447683 GRAMD1CQ8IYS0 662 aa18.56■□□□□ 0.56
OTUB1-204ENST00000447683 STAG2Q8N3U4 1231 aa18.56■□□□□ 0.56
OTUB1-204ENST00000447683 SYMPKQ92797 1274 aaKnown RBP18.56■□□□□ 0.56
OTUB1-204ENST00000447683 FANCLQ9NW38 375 aa18.56■□□□□ 0.56
OTUB1-204ENST00000447683 MAD2L2Q9UI95 211 aa18.56■□□□□ 0.56
OTUB1-204ENST00000447683 POLRMTO00411 1230 aaKnown RBP18.56■□□□□ 0.56
OTUB1-204ENST00000447683 TNNT1P13805 278 aa18.56■□□□□ 0.56
OTUB1-204ENST00000447683 UBASH3AP57075 661 aa18.56■□□□□ 0.56
OTUB1-204ENST00000447683 TPD52L1Q16890 204 aaPredicted RBP18.56■□□□□ 0.56
OTUB1-204ENST00000447683 SLC44A5Q8NCS7 719 aa18.56■□□□□ 0.56
OTUB1-204ENST00000447683 TBC1D16Q8TBP0 767 aa18.56■□□□□ 0.56
OTUB1-204ENST00000447683 DPF2Q92785 391 aa18.56■□□□□ 0.56
OTUB1-204ENST00000447683 CCDC34Q96HJ3 373 aa18.56■□□□□ 0.56
OTUB1-204ENST00000447683 POLLQ9UGP5 575 aa18.56■□□□□ 0.56
OTUB1-204ENST00000447683 PLCG2P16885 1265 aa18.55■□□□□ 0.56
OTUB1-204ENST00000447683 HSPA1LP34931 641 aa18.55■□□□□ 0.56
OTUB1-204ENST00000447683 PIK3AP1Q6ZUJ8 805 aa18.55■□□□□ 0.56
OTUB1-204ENST00000447683 ENOX1Q8TC92 643 aaKnown RBP18.55■□□□□ 0.56
OTUB1-204ENST00000447683 DHX58Q96C10 678 aa18.55■□□□□ 0.56
OTUB1-204ENST00000447683 ZNF287Q9HBT7 754 aa18.55■□□□□ 0.56
OTUB1-204ENST00000447683 GAKO14976 1311 aa18.55■□□□□ 0.56
OTUB1-204ENST00000447683 SNED1Q8TER0 1413 aa18.55■□□□□ 0.56
OTUB1-204ENST00000447683 RIOK3O14730 519 aaKnown RBP18.55■□□□□ 0.56
OTUB1-204ENST00000447683 ADAMTS3O15072 1205 aa18.55■□□□□ 0.56
OTUB1-204ENST00000447683 BRD2P25440 801 aaKnown RBP18.55■□□□□ 0.56
OTUB1-204ENST00000447683 C16orf86Q6ZW13 317 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms