RNA–Protein interactions for RNA: ENST00000447641.5

SREBF1-207, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 644 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-207ENST00000447641 STAG1Q8WVM7 1258 aa16.76■□□□□ 0.27
SREBF1-207ENST00000447641 MAP4K1Q92918 833 aa16.76■□□□□ 0.27
SREBF1-207ENST00000447641 ZFYVE28Q9HCC9 887 aa16.76■□□□□ 0.27
SREBF1-207ENST00000447641 TMX2Q9Y320 296 aa16.76■□□□□ 0.27
SREBF1-207ENST00000447641 A0A0C4DFX4 3053 aa16.75■□□□□ 0.27
SREBF1-207ENST00000447641 ZNF213O14771 459 aa16.75■□□□□ 0.27
SREBF1-207ENST00000447641 TLR2O60603 784 aa16.75■□□□□ 0.27
SREBF1-207ENST00000447641 USP14P54578 494 aa16.75■□□□□ 0.27
SREBF1-207ENST00000447641 HAND2P61296 217 aa16.75■□□□□ 0.27
SREBF1-207ENST00000447641 ICA1Q05084 483 aa16.75■□□□□ 0.27
SREBF1-207ENST00000447641 AKNAD1Q5T1N1 836 aa16.75■□□□□ 0.27
SREBF1-207ENST00000447641 CLEC10AQ8IUN9 316 aa16.75■□□□□ 0.27
SREBF1-207ENST00000447641 TBC1D10CQ8IV04 446 aa16.75■□□□□ 0.27
SREBF1-207ENST00000447641 NYAP2Q9P242 653 aa16.75■□□□□ 0.27
SREBF1-207ENST00000447641 CDC45O75419 566 aa16.74■□□□□ 0.27
SREBF1-207ENST00000447641 EEF2P13639 858 aaKnown RBP16.74■□□□□ 0.27
SREBF1-207ENST00000447641 NOVP48745 357 aa16.74■□□□□ 0.27
SREBF1-207ENST00000447641 LACTBP83111 547 aaPredicted RBP16.74■□□□□ 0.27
SREBF1-207ENST00000447641 TFAP4Q01664 338 aa16.74■□□□□ 0.27
SREBF1-207ENST00000447641 C17orf99Q6UX52 265 aa16.74■□□□□ 0.27
SREBF1-207ENST00000447641 MKL1Q969V6 931 aa16.74■□□□□ 0.27
SREBF1-207ENST00000447641 LSG1Q9H089 658 aaKnown RBP16.74■□□□□ 0.27
SREBF1-207ENST00000447641 MTMR4Q9NYA4 1195 aa16.74■□□□□ 0.27
SREBF1-207ENST00000447641 TMOD4Q9NZQ9 345 aa16.74■□□□□ 0.27
SREBF1-207ENST00000447641 NT5C2P49902 561 aa16.73■□□□□ 0.27
SREBF1-207ENST00000447641 MTFR1Q15390 333 aa16.73■□□□□ 0.27
SREBF1-207ENST00000447641 IMMTQ16891 758 aaKnown RBP16.73■□□□□ 0.27
SREBF1-207ENST00000447641 FAM47AQ5JRC9 791 aa16.73■□□□□ 0.27
SREBF1-207ENST00000447641 KIAA1755Q5JYT7 1200 aa16.73■□□□□ 0.27
SREBF1-207ENST00000447641 NKX2-3Q8TAU0 364 aa16.73■□□□□ 0.27
SREBF1-207ENST00000447641 CEP95Q96GE4 821 aa16.73■□□□□ 0.27
SREBF1-207ENST00000447641 ARHGEF10LQ9HCE6 1279 aa16.73■□□□□ 0.27
SREBF1-207ENST00000447641 IL17RBQ9NRM6 502 aa16.73■□□□□ 0.27
SREBF1-207ENST00000447641 SYNPO2Q9UMS6 1093 aa16.73■□□□□ 0.27
SREBF1-207ENST00000447641 U3KPZ7 1027 aaPredicted RBP16.73■□□□□ 0.27
SREBF1-207ENST00000447641 MYH4Q9Y623 1939 aa16.72■□□□□ 0.27
SREBF1-207ENST00000447641 EIF5BO60841 1220 aaKnown RBP16.72■□□□□ 0.27
SREBF1-207ENST00000447641 TSPY3P0CV98 308 aa16.72■□□□□ 0.27
SREBF1-207ENST00000447641 TSPY8P0CW00 308 aa16.72■□□□□ 0.27
SREBF1-207ENST00000447641 CYP2C8P10632 490 aa16.72■□□□□ 0.27
SREBF1-207ENST00000447641 PABPC4Q13310 644 aaKnown RBP eCLIP16.72■□□□□ 0.271e-6■□□□□ 9.5
SREBF1-207ENST00000447641 MFSD6Q6ZSS7 791 aa16.72■□□□□ 0.27
SREBF1-207ENST00000447641 NBPF11Q86T75 865 aa16.72■□□□□ 0.27
SREBF1-207ENST00000447641 PARK7Q99497 189 aaKnown RBP16.72■□□□□ 0.27
SREBF1-207ENST00000447641 FEZ1Q99689 392 aa16.72■□□□□ 0.27
SREBF1-207ENST00000447641 ASCC2Q9H1I8 757 aaPredicted RBP16.72■□□□□ 0.27
SREBF1-207ENST00000447641 RNF41Q9H4P4 317 aaPredicted RBP16.72■□□□□ 0.27
SREBF1-207ENST00000447641 SH2D4AQ9H788 454 aa16.72■□□□□ 0.27
SREBF1-207ENST00000447641 TCP11L1Q9NUJ3 509 aa16.72■□□□□ 0.27
SREBF1-207ENST00000447641 RLFQ13129 1914 aa16.71■□□□□ 0.27
SREBF1-207ENST00000447641 CYP21A2P08686 494 aa16.71■□□□□ 0.27
SREBF1-207ENST00000447641 VCAM1P19320 739 aa16.71■□□□□ 0.27
SREBF1-207ENST00000447641 ZYXQ15942 572 aaKnown RBP16.71■□□□□ 0.27
SREBF1-207ENST00000447641 CHRDL2Q6WN34 429 aa16.71■□□□□ 0.27
SREBF1-207ENST00000447641 UBE2Q1Q7Z7E8 422 aa16.71■□□□□ 0.27
SREBF1-207ENST00000447641 LPAR1Q92633 364 aa16.71■□□□□ 0.27
SREBF1-207ENST00000447641 PRO3102Q9H379 93 aa16.71■□□□□ 0.27
SREBF1-207ENST00000447641 VCPKMTQ9H867 229 aa16.71■□□□□ 0.27
SREBF1-207ENST00000447641 PNMA3Q9UL41 463 aa16.71■□□□□ 0.27
SREBF1-207ENST00000447641 TSPY2A6NKD2 308 aa16.7■□□□□ 0.26
SREBF1-207ENST00000447641 RANBP6O60518 1105 aaKnown RBP16.7■□□□□ 0.26
SREBF1-207ENST00000447641 ECM2O94769 699 aaPredicted RBP16.7■□□□□ 0.26
SREBF1-207ENST00000447641 TTLL1O95922 423 aa16.7■□□□□ 0.26
SREBF1-207ENST00000447641 BCRP11274 1271 aa16.7■□□□□ 0.26
SREBF1-207ENST00000447641 OSBPP22059 807 aa16.7■□□□□ 0.26
SREBF1-207ENST00000447641 POTEEQ6S8J3 1075 aa16.7■□□□□ 0.26
SREBF1-207ENST00000447641 CASC1Q6TDU7 716 aa16.7■□□□□ 0.26
SREBF1-207ENST00000447641 CATSPERGQ6ZRH7 1159 aa16.7■□□□□ 0.26
SREBF1-207ENST00000447641 KIAA1211Q6ZU35 1233 aa16.7■□□□□ 0.26
SREBF1-207ENST00000447641 RBM27Q9P2N5 1060 aaKnown RBP16.7■□□□□ 0.26
SREBF1-207ENST00000447641 CLIP2Q9UDT6 1046 aa16.7■□□□□ 0.26
SREBF1-207ENST00000447641 UNC80Q8N2C7 3258 aa16.7■□□□□ 0.26
SREBF1-207ENST00000447641 NEDD4P46934 1319 aa16.7■□□□□ 0.26
SREBF1-207ENST00000447641 USP17L15C9J2P7 530 aa16.69■□□□□ 0.26
SREBF1-207ENST00000447641 USP17L13C9JLJ4 530 aa16.69■□□□□ 0.26
SREBF1-207ENST00000447641 USP17L11C9JVI0 530 aa16.69■□□□□ 0.26
SREBF1-207ENST00000447641 USP17L18D6R9N7 530 aa16.69■□□□□ 0.26
SREBF1-207ENST00000447641 USP17L22D6RA61 530 aa16.69■□□□□ 0.26
SREBF1-207ENST00000447641 USP17L17D6RBQ6 530 aa16.69■□□□□ 0.26
SREBF1-207ENST00000447641 USP17L19D6RCP7 530 aa16.69■□□□□ 0.26
SREBF1-207ENST00000447641 USP17L20D6RJB6 530 aa16.69■□□□□ 0.26
SREBF1-207ENST00000447641 NMT2O60551 498 aa16.69■□□□□ 0.26
SREBF1-207ENST00000447641 USP17L24Q0WX57 530 aa16.69■□□□□ 0.26
SREBF1-207ENST00000447641 NECTIN1Q15223 517 aa16.69■□□□□ 0.26
SREBF1-207ENST00000447641 PPP4R3BQ5MIZ7 849 aa16.69■□□□□ 0.26
SREBF1-207ENST00000447641 TRIM47Q96LD4 638 aa16.69■□□□□ 0.26
SREBF1-207ENST00000447641 P2RX7Q99572 595 aaKnown RBP16.69■□□□□ 0.26
SREBF1-207ENST00000447641 RBM8AQ9Y5S9 174 aaKnown RBP16.69■□□□□ 0.26
SREBF1-207ENST00000447641 TAF6LQ9Y6J9 622 aa16.69■□□□□ 0.26
SREBF1-207ENST00000447641 PARP14Q460N5 1801 aa16.68■□□□□ 0.26
SREBF1-207ENST00000447641 GCLCP48506 637 aaPredicted RBP16.68■□□□□ 0.26
SREBF1-207ENST00000447641 ARHGEF6Q15052 776 aa16.68■□□□□ 0.26
SREBF1-207ENST00000447641 RRP12Q5JTH9 1297 aaKnown RBP16.68■□□□□ 0.26
SREBF1-207ENST00000447641 LBX2Q6XYB7 198 aa16.68■□□□□ 0.26
SREBF1-207ENST00000447641 GMCL1P1Q8NEA9 526 aa16.68■□□□□ 0.26
SREBF1-207ENST00000447641 ESR2Q92731 530 aa16.68■□□□□ 0.26
SREBF1-207ENST00000447641 RPAP3Q9H6T3 665 aaPredicted RBP16.68■□□□□ 0.26
SREBF1-207ENST00000447641 CNNM2Q9H8M5 875 aa16.68■□□□□ 0.26
SREBF1-207ENST00000447641 GOPCQ9HD26 462 aa16.68■□□□□ 0.26
SREBF1-207ENST00000447641 ZSWIM5Q9P217 1185 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms