RNA–Protein interactions for RNA: ENST00000447540.5

CHD9-203, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 11,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-203ENST00000447540 TTC22Q5TAA0 569 aa3.23□□□□□ -1.89
CHD9-203ENST00000447540 OSBPL3Q9H4L5 887 aa3.23□□□□□ -1.89
CHD9-203ENST00000447540 PHAXQ9H814 394 aaKnown RBP3.23□□□□□ -1.89
CHD9-203ENST00000447540 ZWILCHQ9H900 591 aa3.23□□□□□ -1.89
CHD9-203ENST00000447540 DACT1Q9NYF0 836 aa3.23□□□□□ -1.89
CHD9-203ENST00000447540 HDAC9Q9UKV0 1011 aa3.23□□□□□ -1.89
CHD9-203ENST00000447540 CARMIL2Q6F5E8 1435 aa3.23□□□□□ -1.89
CHD9-203ENST00000447540 EXOC5O00471 708 aa3.23□□□□□ -1.89
CHD9-203ENST00000447540 GAS8O95995 478 aa3.23□□□□□ -1.89
CHD9-203ENST00000447540 IGHDP01880 384 aa3.23□□□□□ -1.89
CHD9-203ENST00000447540 KCNA2P16389 499 aa3.23□□□□□ -1.89
CHD9-203ENST00000447540 PSMC4P43686 418 aa3.23□□□□□ -1.89
CHD9-203ENST00000447540 ST5P78524 1137 aa3.23□□□□□ -1.89
CHD9-203ENST00000447540 ARHGAP4P98171 946 aa3.23□□□□□ -1.89
CHD9-203ENST00000447540 TCERG1LQ5VWI1 586 aa3.23□□□□□ -1.89
CHD9-203ENST00000447540 HIBCHQ6NVY1 386 aaPredicted RBP3.23□□□□□ -1.89
CHD9-203ENST00000447540 TTLL7Q6ZT98 887 aa3.23□□□□□ -1.89
CHD9-203ENST00000447540 PPP1R13BQ96KQ4 1090 aa3.23□□□□□ -1.89
CHD9-203ENST00000447540 ESF1Q9H501 851 aaKnown RBP3.23□□□□□ -1.89
CHD9-203ENST00000447540 BARX2Q9UMQ3 279 aaPredicted RBP3.23□□□□□ -1.89
CHD9-203ENST00000447540 ATAD2BQ9ULI0 1458 aa3.23□□□□□ -1.89
CHD9-203ENST00000447540 GMNCA6NCL1 334 aa3.22□□□□□ -1.89
CHD9-203ENST00000447540 NOL3O60936 208 aaKnown RBP3.22□□□□□ -1.89
CHD9-203ENST00000447540 SEC24BO95487 1268 aa3.22□□□□□ -1.89
CHD9-203ENST00000447540 SCP2P22307 547 aa3.22□□□□□ -1.89
CHD9-203ENST00000447540 POU5F1Q01860 360 aaKnown RBP3.22□□□□□ -1.89
CHD9-203ENST00000447540 MLKLQ8NB16 471 aa3.22□□□□□ -1.89
CHD9-203ENST00000447540 ENOX1Q8TC92 643 aaKnown RBP3.22□□□□□ -1.89
CHD9-203ENST00000447540 KRT23Q9C075 422 aa3.22□□□□□ -1.89
CHD9-203ENST00000447540 SAR1BQ9Y6B6 198 aa3.22□□□□□ -1.89
CHD9-203ENST00000447540 DAPK1P53355 1430 aa3.22□□□□□ -1.89
CHD9-203ENST00000447540 UBTFL6P0CB48 400 aaPredicted RBP3.22□□□□□ -1.89
CHD9-203ENST00000447540 CCNCP24863 283 aa3.22□□□□□ -1.89
CHD9-203ENST00000447540 ESRRGP62508 458 aa3.22□□□□□ -1.89
CHD9-203ENST00000447540 MECOMQ03112 1051 aa3.22□□□□□ -1.89
CHD9-203ENST00000447540 MUM1Q2TAK8 710 aa3.22□□□□□ -1.89
CHD9-203ENST00000447540 THOC7Q6I9Y2 204 aaKnown RBP3.22□□□□□ -1.89
CHD9-203ENST00000447540 ZNF449Q6P9G9 518 aa3.22□□□□□ -1.89
CHD9-203ENST00000447540 BLOC1S2Q6QNY1 142 aa3.22□□□□□ -1.89
CHD9-203ENST00000447540 ACMSDQ8TDX5 336 aa3.22□□□□□ -1.89
CHD9-203ENST00000447540 TAF4BQ92750 862 aa3.22□□□□□ -1.89
CHD9-203ENST00000447540 CEP19Q96LK0 163 aa3.22□□□□□ -1.89
CHD9-203ENST00000447540 NR1H4Q96RI1 486 aaPredicted RBP3.22□□□□□ -1.89
CHD9-203ENST00000447540 FOXD4L1Q9NU39 408 aa3.22□□□□□ -1.89
CHD9-203ENST00000447540 TBC1D23Q9NUY8 699 aa3.22□□□□□ -1.89
CHD9-203ENST00000447540 RMND1Q9NWS8 449 aa3.22□□□□□ -1.89
CHD9-203ENST00000447540 STK17AQ9UEE5 414 aa3.22□□□□□ -1.89
CHD9-203ENST00000447540 ANGPTL2Q9UKU9 493 aa3.22□□□□□ -1.89
CHD9-203ENST00000447540 ADGRL3Q9HAR2 1447 aa3.22□□□□□ -1.89
CHD9-203ENST00000447540 STK38Q15208 465 aa3.22□□□□□ -1.89
CHD9-203ENST00000447540 RBM43Q6ZSC3 357 aaKnown RBP3.22□□□□□ -1.89
CHD9-203ENST00000447540 CADPS2Q86UW7 1296 aa3.22□□□□□ -1.89
CHD9-203ENST00000447540 CEP63Q96MT8 703 aa3.22□□□□□ -1.89
CHD9-203ENST00000447540 FAF1Q9UNN5 650 aaPredicted RBP3.22□□□□□ -1.89
CHD9-203ENST00000447540 NOC2LQ9Y3T9 749 aaKnown RBP3.22□□□□□ -1.89
CHD9-203ENST00000447540 PCDHB15Q9Y5E8 787 aa3.22□□□□□ -1.89
CHD9-203ENST00000447540 WDR91A4D1P6 747 aa3.22□□□□□ -1.89
CHD9-203ENST00000447540 ZSCAN9O15535 394 aaPredicted RBP3.22□□□□□ -1.89
CHD9-203ENST00000447540 GNAT1P11488 350 aa3.22□□□□□ -1.89
CHD9-203ENST00000447540 RPL17P18621 184 aaKnown RBP3.22□□□□□ -1.89
CHD9-203ENST00000447540 SPA17Q15506 151 aa3.22□□□□□ -1.89
CHD9-203ENST00000447540 TTC39CQ8N584 583 aa3.22□□□□□ -1.89
CHD9-203ENST00000447540 SNF8Q96H20 258 aa3.22□□□□□ -1.89
CHD9-203ENST00000447540 CCT7Q99832 543 aa3.22□□□□□ -1.89
CHD9-203ENST00000447540 HAUS8Q9BT25 410 aa3.22□□□□□ -1.89
CHD9-203ENST00000447540 PLVAPQ9BX97 442 aa3.22□□□□□ -1.89
CHD9-203ENST00000447540 MMADHCQ9H3L0 296 aaPredicted RBP3.22□□□□□ -1.89
CHD9-203ENST00000447540 HELLSQ9NRZ9 838 aa3.22□□□□□ -1.89
CHD9-203ENST00000447540 RRP7BPQ9NSQ0 103 aa3.22□□□□□ -1.89
CHD9-203ENST00000447540 RBM27Q9P2N5 1060 aaKnown RBP3.22□□□□□ -1.89
CHD9-203ENST00000447540 PCSK1NQ9UHG2 260 aa3.22□□□□□ -1.89
CHD9-203ENST00000447540 AKR1B15C9JRZ8 316 aaPredicted RBP3.22□□□□□ -1.89
CHD9-203ENST00000447540 ZWINTO95229 277 aa3.22□□□□□ -1.89
CHD9-203ENST00000447540 OCA2Q04671 838 aa3.22□□□□□ -1.89
CHD9-203ENST00000447540 ITIH4Q14624 930 aa3.22□□□□□ -1.89
CHD9-203ENST00000447540 WTAPQ15007 396 aa3.22□□□□□ -1.89
CHD9-203ENST00000447540 ZCWPW2Q504Y3 356 aa3.22□□□□□ -1.89
CHD9-203ENST00000447540 PDCD4Q53EL6 469 aaKnown RBP3.22□□□□□ -1.89
CHD9-203ENST00000447540 KIAA1841Q6NSI8 718 aa3.22□□□□□ -1.89
CHD9-203ENST00000447540 GIMAP6Q6P9H5 292 aa3.22□□□□□ -1.89
CHD9-203ENST00000447540 RSRC2Q7L4I2 434 aaKnown RBP3.22□□□□□ -1.89
CHD9-203ENST00000447540 MRPS27Q92552 414 aaKnown RBP3.22□□□□□ -1.89
CHD9-203ENST00000447540 SELENOOQ9BVL4 669 aa3.22□□□□□ -1.89
CHD9-203ENST00000447540 MRGBPQ9NV56 204 aa3.22□□□□□ -1.89
CHD9-203ENST00000447540 KLHL14Q9P2G3 628 aa3.22□□□□□ -1.89
CHD9-203ENST00000447540 PARP2Q9UGN5 583 aa3.22□□□□□ -1.89
CHD9-203ENST00000447540 GNPTABQ3T906 1256 aa3.22□□□□□ -1.89
CHD9-203ENST00000447540 POTEEQ6S8J3 1075 aa3.22□□□□□ -1.89
CHD9-203ENST00000447540 ALDH16A1Q8IZ83 802 aa3.22□□□□□ -1.89
CHD9-203ENST00000447540 CATSPER1Q8NEC5 780 aa3.22□□□□□ -1.89
CHD9-203ENST00000447540 DDI1Q8WTU0 396 aa3.22□□□□□ -1.89
CHD9-203ENST00000447540 NSMCE1Q8WV22 266 aa3.22□□□□□ -1.89
CHD9-203ENST00000447540 KLHL29Q96CT2 875 aa3.22□□□□□ -1.89
CHD9-203ENST00000447540 RSPH9Q9H1X1 276 aaPredicted RBP3.22□□□□□ -1.89
CHD9-203ENST00000447540 PICK1Q9NRD5 415 aa3.22□□□□□ -1.89
CHD9-203ENST00000447540 AATFQ9NY61 560 aaKnown RBP eCLIP3.22□□□□□ -1.89
CHD9-203ENST00000447540 MAGEA13PA6NCF6 341 aa3.22□□□□□ -1.89
CHD9-203ENST00000447540 XPOTO43592 962 aaKnown RBP3.22□□□□□ -1.89
CHD9-203ENST00000447540 TRHP20396 242 aaPredicted RBP3.22□□□□□ -1.89
CHD9-203ENST00000447540 STX17P56962 302 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms