RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 EPN3Q9H201 632 aa6.48□□□□□ -1.37
HMGB1P16-201ENST00000447155 HMX2A2RU54 273 aa6.47□□□□□ -1.37
HMGB1P16-201ENST00000447155 SUSD5O60279 629 aa6.47□□□□□ -1.37
HMGB1P16-201ENST00000447155 LEFTY1O75610 366 aa6.47□□□□□ -1.37
HMGB1P16-201ENST00000447155 TP53P04637 393 aaPredicted RBP6.47□□□□□ -1.37
HMGB1P16-201ENST00000447155 FAM87AP0C7U9 286 aa6.47□□□□□ -1.37
HMGB1P16-201ENST00000447155 CANXP27824 592 aaKnown RBP6.47□□□□□ -1.37
HMGB1P16-201ENST00000447155 GSK3AP49840 483 aa6.47□□□□□ -1.37
HMGB1P16-201ENST00000447155 AXDND1Q5T1B0 1012 aaPredicted RBP6.47□□□□□ -1.37
HMGB1P16-201ENST00000447155 TDRD10Q5VZ19 366 aaKnown RBP6.47□□□□□ -1.37
HMGB1P16-201ENST00000447155 OGFOD3Q6PK18 319 aa6.47□□□□□ -1.37
HMGB1P16-201ENST00000447155 JAZF1Q86VZ6 243 aa6.47□□□□□ -1.37
HMGB1P16-201ENST00000447155 CCDC144CPQ8IYA2 1237 aa6.47□□□□□ -1.37
HMGB1P16-201ENST00000447155 ZNF512BQ96KM6 892 aaPredicted RBP6.47□□□□□ -1.37
HMGB1P16-201ENST00000447155 TBC1D32Q96NH3 1257 aa6.47□□□□□ -1.37
HMGB1P16-201ENST00000447155 DNAJC7Q99615 494 aa6.47□□□□□ -1.37
HMGB1P16-201ENST00000447155 MKRN2Q9H000 416 aaKnown RBP6.47□□□□□ -1.37
HMGB1P16-201ENST00000447155 TPX2Q9ULW0 747 aaKnown RBP6.47□□□□□ -1.37
HMGB1P16-201ENST00000447155 ANKRD34BA5PLL1 514 aa6.46□□□□□ -1.38
HMGB1P16-201ENST00000447155 ADMP35318 185 aa6.46□□□□□ -1.38
HMGB1P16-201ENST00000447155 CYP27C1Q4G0S4 372 aa6.46□□□□□ -1.38
HMGB1P16-201ENST00000447155 ANKRD39Q53RE8 183 aa6.46□□□□□ -1.38
HMGB1P16-201ENST00000447155 HEATR6Q6AI08 1181 aaKnown RBP6.46□□□□□ -1.38
HMGB1P16-201ENST00000447155 SDE2Q6IQ49 451 aa6.46□□□□□ -1.38
HMGB1P16-201ENST00000447155 C7orf61Q8IZ16 206 aa6.46□□□□□ -1.38
HMGB1P16-201ENST00000447155 HAUS7Q99871 368 aa6.46□□□□□ -1.38
HMGB1P16-201ENST00000447155 PRDM5Q9NQX1 630 aaPredicted RBP6.46□□□□□ -1.38
HMGB1P16-201ENST00000447155 TPSG1Q9NRR2 321 aa6.46□□□□□ -1.38
HMGB1P16-201ENST00000447155 FAM86C1Q9NVL1 165 aa6.46□□□□□ -1.38
HMGB1P16-201ENST00000447155 ZMYM5Q9UJ78 669 aa6.46□□□□□ -1.38
HMGB1P16-201ENST00000447155 IGF2BP3O00425 579 aaKnown RBP eCLIP6.45□□□□□ -1.38
HMGB1P16-201ENST00000447155 GDF11O95390 407 aa6.45□□□□□ -1.38
HMGB1P16-201ENST00000447155 CYP27A1Q02318 531 aa6.45□□□□□ -1.38
HMGB1P16-201ENST00000447155 AUHQ13825 339 aaKnown RBP6.45□□□□□ -1.38
HMGB1P16-201ENST00000447155 TCEAL1Q15170 157 aa6.45□□□□□ -1.38
HMGB1P16-201ENST00000447155 SLC10A6Q3KNW5 377 aa6.45□□□□□ -1.38
HMGB1P16-201ENST00000447155 PLA2G4EQ3MJ16 856 aa6.45□□□□□ -1.38
HMGB1P16-201ENST00000447155 SFRP5Q5T4F7 317 aa6.45□□□□□ -1.38
HMGB1P16-201ENST00000447155 DCAF15Q66K64 600 aa6.45□□□□□ -1.38
HMGB1P16-201ENST00000447155 RNF43Q68DV7 783 aa6.45□□□□□ -1.38
HMGB1P16-201ENST00000447155 FAM177A1Q8N128 213 aaPredicted RBP6.45□□□□□ -1.38
HMGB1P16-201ENST00000447155 TMEM151AQ8N4L1 468 aa6.45□□□□□ -1.38
HMGB1P16-201ENST00000447155 RNPC3Q96LT9 517 aaKnown RBP6.45□□□□□ -1.38
HMGB1P16-201ENST00000447155 APBA2Q99767 749 aa6.45□□□□□ -1.38
HMGB1P16-201ENST00000447155 KLHL25Q9H0H3 589 aa6.45□□□□□ -1.38
HMGB1P16-201ENST00000447155 SUSD2Q9UGT4 822 aa6.45□□□□□ -1.38
HMGB1P16-201ENST00000447155 GTF2IRD1Q9UHL9 959 aa6.45□□□□□ -1.38
HMGB1P16-201ENST00000447155 MRPL42Q9Y6G3 142 aaKnown RBP6.45□□□□□ -1.38
HMGB1P16-201ENST00000447155 IQCA1LA6NCM1 817 aa6.44□□□□□ -1.38
HMGB1P16-201ENST00000447155 CBFA2T2O43439 604 aa6.44□□□□□ -1.38
HMGB1P16-201ENST00000447155 ITGB2P05107 769 aa6.44□□□□□ -1.38
HMGB1P16-201ENST00000447155 EPHX1P07099 455 aa6.44□□□□□ -1.38
HMGB1P16-201ENST00000447155 KIR3DL1P43629 444 aa6.44□□□□□ -1.38
HMGB1P16-201ENST00000447155 SSRP1Q08945 709 aaKnown RBP6.44□□□□□ -1.38
HMGB1P16-201ENST00000447155 C22orf34Q6ZV56 151 aa6.44□□□□□ -1.38
HMGB1P16-201ENST00000447155 SPATC1Q76KD6 591 aa6.44□□□□□ -1.38
HMGB1P16-201ENST00000447155 FAM214BQ7L5A3 538 aa6.44□□□□□ -1.38
HMGB1P16-201ENST00000447155 NLGN1Q8N2Q7 840 aa6.44□□□□□ -1.38
HMGB1P16-201ENST00000447155 LILRB2Q8N423 598 aa6.44□□□□□ -1.38
HMGB1P16-201ENST00000447155 GBP3Q9H0R5 595 aa6.44□□□□□ -1.38
HMGB1P16-201ENST00000447155 KCNH3Q9ULD8 1083 aa6.44□□□□□ -1.38
HMGB1P16-201ENST00000447155 DCAF1Q9Y4B6 1507 aa6.44□□□□□ -1.38
HMGB1P16-201ENST00000447155 AGRPO00253 132 aa6.43□□□□□ -1.38
HMGB1P16-201ENST00000447155 GSC2O15499 205 aa6.43□□□□□ -1.38
HMGB1P16-201ENST00000447155 DIAPH1O60610 1272 aaKnown RBP6.43□□□□□ -1.38
HMGB1P16-201ENST00000447155 CD247P20963 164 aa6.43□□□□□ -1.38
HMGB1P16-201ENST00000447155 NBPF9Q3BBW0 867 aa6.43□□□□□ -1.38
HMGB1P16-201ENST00000447155 SV2CQ496J9 727 aa6.43□□□□□ -1.38
HMGB1P16-201ENST00000447155 DUSP27Q5VZP5 1158 aa6.43□□□□□ -1.38
HMGB1P16-201ENST00000447155 LRRC47Q8N1G4 583 aaKnown RBP6.43□□□□□ -1.38
HMGB1P16-201ENST00000447155 FBXL6Q8N531 539 aa6.43□□□□□ -1.38
HMGB1P16-201ENST00000447155 JMYQ8N9B5 988 aa6.43□□□□□ -1.38
HMGB1P16-201ENST00000447155 SH3TC2Q8TF17 1288 aa6.43□□□□□ -1.38
HMGB1P16-201ENST00000447155 THAP3Q8WTV1 239 aaPredicted RBP6.43□□□□□ -1.38
HMGB1P16-201ENST00000447155 SGSM3Q96HU1 749 aa6.43□□□□□ -1.38
HMGB1P16-201ENST00000447155 MFSD14AQ96MC6 490 aa6.43□□□□□ -1.38
HMGB1P16-201ENST00000447155 DBNDD2Q9BQY9 259 aa6.43□□□□□ -1.38
HMGB1P16-201ENST00000447155 PRR13Q9NZ81 148 aa6.43□□□□□ -1.38
HMGB1P16-201ENST00000447155 PFDN2Q9UHV9 154 aa6.43□□□□□ -1.38
HMGB1P16-201ENST00000447155 ZNF451Q9Y4E5 1061 aa6.43□□□□□ -1.38
HMGB1P16-201ENST00000447155 PCDHB12Q9Y5F1 795 aa6.43□□□□□ -1.38
HMGB1P16-201ENST00000447155 KDM2BQ8NHM5 1336 aa6.43□□□□□ -1.38
HMGB1P16-201ENST00000447155 A0A087WZG4 1122 aa6.42□□□□□ -1.38
HMGB1P16-201ENST00000447155 FAM170BA6NMN3 283 aa6.42□□□□□ -1.38
HMGB1P16-201ENST00000447155 ENPP3O14638 875 aa6.42□□□□□ -1.38
HMGB1P16-201ENST00000447155 SHOXO15266 292 aa6.42□□□□□ -1.38
HMGB1P16-201ENST00000447155 PPM1BO75688 479 aa6.42□□□□□ -1.38
HMGB1P16-201ENST00000447155 F13BP05160 661 aa6.42□□□□□ -1.38
HMGB1P16-201ENST00000447155 H2AFB1P0C5Y9 115 aa6.42□□□□□ -1.38
HMGB1P16-201ENST00000447155 H2AFB2P0C5Z0 115 aa6.42□□□□□ -1.38
HMGB1P16-201ENST00000447155 ZNF865P0CJ78 1059 aaPredicted RBP6.42□□□□□ -1.38
HMGB1P16-201ENST00000447155 ITGA4P13612 1032 aa6.42□□□□□ -1.38
HMGB1P16-201ENST00000447155 NFIAQ12857 509 aa6.42□□□□□ -1.38
HMGB1P16-201ENST00000447155 C2orf27AQ580R0 203 aa6.42□□□□□ -1.38
HMGB1P16-201ENST00000447155 ZNF765Q7L2R6 523 aa6.42□□□□□ -1.38
HMGB1P16-201ENST00000447155 ADAT2Q7Z6V5 191 aaKnown RBP6.42□□□□□ -1.38
HMGB1P16-201ENST00000447155 FGD4Q96M96 766 aa6.42□□□□□ -1.38
HMGB1P16-201ENST00000447155 HEXIM2Q96MH2 286 aaKnown RBP6.42□□□□□ -1.38
HMGB1P16-201ENST00000447155 METTL22Q9BUU2 404 aaPredicted RBP6.42□□□□□ -1.38
HMGB1P16-201ENST00000447155 SPATA9Q9BWV2 254 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms