RNA–Protein interactions for RNA: ENST00000444746.6

RIF1-205, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 7,897 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-205ENST00000444746 MGARPQ8TDB4 240 aa8.92□□□□□ -0.98
RIF1-205ENST00000444746 PIGBQ92521 554 aa8.92□□□□□ -0.98
RIF1-205ENST00000444746 CTTNBP2NLQ9P2B4 639 aa8.92□□□□□ -0.98
RIF1-205ENST00000444746 SCAF8Q9UPN6 1271 aaKnown RBP8.92□□□□□ -0.98
RIF1-205ENST00000444746 ADCY9O60503 1353 aa8.92□□□□□ -0.98
RIF1-205ENST00000444746 CTTNBP2Q8WZ74 1663 aa8.92□□□□□ -0.98
RIF1-205ENST00000444746 MAP3K15Q6ZN16 1313 aa8.92□□□□□ -0.98
RIF1-205ENST00000444746 KLRF2D3W0D1 207 aa8.92□□□□□ -0.98
RIF1-205ENST00000444746 RAD17O75943 681 aa8.92□□□□□ -0.98
RIF1-205ENST00000444746 ATXN8OSP0DMR3 200 aa8.92□□□□□ -0.98
RIF1-205ENST00000444746 GADL1Q6ZQY3 521 aa8.92□□□□□ -0.98
RIF1-205ENST00000444746 RNF34Q969K3 372 aa8.92□□□□□ -0.98
RIF1-205ENST00000444746 AGTPBP1Q9UPW5 1226 aa8.92□□□□□ -0.98
RIF1-205ENST00000444746 ENC1O14682 589 aa8.92□□□□□ -0.98
RIF1-205ENST00000444746 METTL13Q8N6R0 699 aa8.92□□□□□ -0.98
RIF1-205ENST00000444746 EHBP1Q8NDI1 1231 aa8.92□□□□□ -0.98
RIF1-205ENST00000444746 NAPGQ99747 312 aaPredicted RBP8.92□□□□□ -0.98
RIF1-205ENST00000444746 RNF123Q5XPI4 1314 aa8.91□□□□□ -0.98
RIF1-205ENST00000444746 ERVV-2B6SEH9 535 aa8.91□□□□□ -0.98
RIF1-205ENST00000444746 ZMYND10O75800 440 aa8.91□□□□□ -0.98
RIF1-205ENST00000444746 KIF4AO95239 1232 aa8.91□□□□□ -0.98
RIF1-205ENST00000444746 ARHGEF25Q86VW2 580 aa8.91□□□□□ -0.98
RIF1-205ENST00000444746 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.91□□□□□ -0.98
RIF1-205ENST00000444746 TTLL3Q9Y4R7 772 aa8.91□□□□□ -0.98
RIF1-205ENST00000444746 NOP56O00567 594 aaKnown RBP8.91□□□□□ -0.98
RIF1-205ENST00000444746 BSPRYQ5W0U4 402 aa8.91□□□□□ -0.98
RIF1-205ENST00000444746 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.91□□□□□ -0.98
RIF1-205ENST00000444746 CFAP43Q8NDM7 1665 aa8.91□□□□□ -0.98
RIF1-205ENST00000444746 SHANK2Q9UPX8 1470 aa8.91□□□□□ -0.98
RIF1-205ENST00000444746 SYNJ2BP-COX16A0A087WUM0 186 aa8.91□□□□□ -0.98
RIF1-205ENST00000444746 NMT2O60551 498 aa8.91□□□□□ -0.98
RIF1-205ENST00000444746 SEC31AO94979 1220 aaKnown RBP8.91□□□□□ -0.98
RIF1-205ENST00000444746 CD19P15391 556 aa8.91□□□□□ -0.98
RIF1-205ENST00000444746 MAGEA1P43355 309 aa8.91□□□□□ -0.98
RIF1-205ENST00000444746 ARID5BQ14865 1188 aa8.91□□□□□ -0.98
RIF1-205ENST00000444746 BLIDQ8IZY5 108 aa8.91□□□□□ -0.98
RIF1-205ENST00000444746 PIGSQ96S52 555 aa8.91□□□□□ -0.98
RIF1-205ENST00000444746 COX16Q9P0S2 106 aa8.91□□□□□ -0.98
RIF1-205ENST00000444746 DNM3Q9UQ16 869 aa8.91□□□□□ -0.98
RIF1-205ENST00000444746 PFKFB2O60825 505 aa8.91□□□□□ -0.98
RIF1-205ENST00000444746 PTPN12Q05209 780 aaKnown RBP8.91□□□□□ -0.98
RIF1-205ENST00000444746 USP17L2Q6R6M4 530 aa8.91□□□□□ -0.98
RIF1-205ENST00000444746 KRBA2Q6ZNG9 492 aa8.91□□□□□ -0.98
RIF1-205ENST00000444746 APOL6Q9BWW8 343 aa8.91□□□□□ -0.98
RIF1-205ENST00000444746 PCIF1Q9H4Z3 704 aa8.91□□□□□ -0.98
RIF1-205ENST00000444746 PCCAP05165 728 aaPredicted RBP8.91□□□□□ -0.98
RIF1-205ENST00000444746 ADCY1Q08828 1119 aa8.91□□□□□ -0.98
RIF1-205ENST00000444746 CNNM4Q6P4Q7 775 aa8.9□□□□□ -0.98
RIF1-205ENST00000444746 CYP26C1Q6V0L0 522 aa8.9□□□□□ -0.98
RIF1-205ENST00000444746 NOSTRINQ8IVI9 506 aa8.9□□□□□ -0.98
RIF1-205ENST00000444746 SECISBP2LQ93073 1101 aaKnown RBP8.9□□□□□ -0.98
RIF1-205ENST00000444746 MAGED2Q9UNF1 606 aaPredicted RBP8.9□□□□□ -0.98
RIF1-205ENST00000444746 CCDC172P0C7W6 258 aa8.9□□□□□ -0.98
RIF1-205ENST00000444746 NIM1KQ8IY84 436 aa8.9□□□□□ -0.98
RIF1-205ENST00000444746 CLIC2O15247 247 aa8.9□□□□□ -0.98
RIF1-205ENST00000444746 ZBED4O75132 1171 aa8.9□□□□□ -0.98
RIF1-205ENST00000444746 HOXB7P09629 217 aa8.9□□□□□ -0.98
RIF1-205ENST00000444746 MRPS9P82933 396 aaKnown RBP8.9□□□□□ -0.98
RIF1-205ENST00000444746 MORC3Q14149 939 aa8.9□□□□□ -0.98
RIF1-205ENST00000444746 WDR44Q5JSH3 913 aa8.9□□□□□ -0.98
RIF1-205ENST00000444746 DAAM2Q86T65 1068 aa8.9□□□□□ -0.98
RIF1-205ENST00000444746 IQCGQ9H095 443 aaKnown RBP8.9□□□□□ -0.98
RIF1-205ENST00000444746 DPH5Q9H2P9 285 aa8.9□□□□□ -0.98
RIF1-205ENST00000444746 PSTPIP2Q9H939 334 aa8.9□□□□□ -0.98
RIF1-205ENST00000444746 KLHL30Q0D2K2 578 aa8.9□□□□□ -0.98
RIF1-205ENST00000444746 PTGDRQ13258 359 aa8.9□□□□□ -0.98
RIF1-205ENST00000444746 NCAPG2Q86XI2 1143 aa8.9□□□□□ -0.98
RIF1-205ENST00000444746 CNGA4Q8IV77 575 aa8.9□□□□□ -0.98
RIF1-205ENST00000444746 BBXQ8WY36 941 aaPredicted RBP8.9□□□□□ -0.98
RIF1-205ENST00000444746 CCDC127Q96BQ5 260 aa8.9□□□□□ -0.98
RIF1-205ENST00000444746 MPHOSPH6Q99547 160 aaKnown RBP8.9□□□□□ -0.98
RIF1-205ENST00000444746 SUGCTQ9HAC7 445 aa8.9□□□□□ -0.98
RIF1-205ENST00000444746 RASAL2Q9UJF2 1139 aa8.9□□□□□ -0.98
RIF1-205ENST00000444746 KCNJ18B7U540 433 aa8.9□□□□□ -0.98
RIF1-205ENST00000444746 CETN3O15182 167 aa8.9□□□□□ -0.98
RIF1-205ENST00000444746 VIMP08670 466 aaKnown RBP8.9□□□□□ -0.98
RIF1-205ENST00000444746 STRN3Q13033 797 aa8.9□□□□□ -0.98
RIF1-205ENST00000444746 KCNJ12Q14500 433 aa8.9□□□□□ -0.98
RIF1-205ENST00000444746 CFAP58Q5T655 872 aa8.9□□□□□ -0.98
RIF1-205ENST00000444746 MIER3Q7Z3K6 550 aa8.9□□□□□ -0.98
RIF1-205ENST00000444746 LLPHQ9BRT6 129 aaKnown RBP8.9□□□□□ -0.98
RIF1-205ENST00000444746 ZNF804BA4D1E1 1349 aa8.9□□□□□ -0.99
RIF1-205ENST00000444746 ZMYM6O95789 1325 aa8.9□□□□□ -0.99
RIF1-205ENST00000444746 ARHGEF12Q9NZN5 1544 aa8.9□□□□□ -0.99
RIF1-205ENST00000444746 POLR2FP61218 127 aaKnown RBP8.9□□□□□ -0.99
RIF1-205ENST00000444746 Q3C1V9 767 aa8.9□□□□□ -0.99
RIF1-205ENST00000444746 CERKLQ49MI3 558 aaPredicted RBP8.9□□□□□ -0.99
RIF1-205ENST00000444746 KRT25Q7Z3Z0 450 aa8.9□□□□□ -0.99
RIF1-205ENST00000444746 TRMT2AQ8IZ69 625 aaKnown RBP8.9□□□□□ -0.99
RIF1-205ENST00000444746 PDE8BO95263 885 aa8.9□□□□□ -0.99
RIF1-205ENST00000444746 CAVIN2O95810 425 aa8.9□□□□□ -0.99
RIF1-205ENST00000444746 MNAT1P51948 309 aa8.9□□□□□ -0.99
RIF1-205ENST00000444746 TRPC3Q13507 836 aa8.9□□□□□ -0.99
RIF1-205ENST00000444746 SEL1L2Q5TEA6 688 aa8.9□□□□□ -0.99
RIF1-205ENST00000444746 SND1Q7KZF4 910 aaKnown RBP eCLIP8.9□□□□□ -0.99
RIF1-205ENST00000444746 CEP57Q86XR8 500 aa8.9□□□□□ -0.99
RIF1-205ENST00000444746 FBF1Q8TES7 1133 aa8.9□□□□□ -0.99
RIF1-205ENST00000444746 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.89□□□□□ -0.99
RIF1-205ENST00000444746 PLEKHA8P1O95397 391 aa8.89□□□□□ -0.99
RIF1-205ENST00000444746 PPANQ9NQ55 473 aaKnown RBP8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms