RNA–Protein interactions for RNA: ENST00000443700.5

AP1S3-206, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 1 (best) BASIC

Gene AP1S3, Length 1,785 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-206ENST00000443700 CTNND2Q9UQB3 1225 aa17.48■□□□□ 0.39
AP1S3-206ENST00000443700 PPP1R3GB7ZBB8 358 aa17.47■□□□□ 0.39
AP1S3-206ENST00000443700 ZBTB22O15209 634 aa17.47■□□□□ 0.39
AP1S3-206ENST00000443700 GTF2E1P29083 439 aaPredicted RBP17.47■□□□□ 0.39
AP1S3-206ENST00000443700 USP49Q70CQ1 688 aa17.47■□□□□ 0.39
AP1S3-206ENST00000443700 DNAJC10Q8IXB1 793 aa17.47■□□□□ 0.39
AP1S3-206ENST00000443700 FAM71BQ8TC56 605 aa17.47■□□□□ 0.39
AP1S3-206ENST00000443700 ESR2Q92731 530 aa17.47■□□□□ 0.39
AP1S3-206ENST00000443700 ZKSCAN3Q9BRR0 538 aa17.47■□□□□ 0.39
AP1S3-206ENST00000443700 VPS18Q9P253 973 aa17.47■□□□□ 0.39
AP1S3-206ENST00000443700 FEZ2Q9UHY8 353 aaPredicted RBP17.47■□□□□ 0.39
AP1S3-206ENST00000443700 TRMT112Q9UI30 125 aaKnown RBP17.47■□□□□ 0.39
AP1S3-206ENST00000443700 RWDD2AQ9UIY3 292 aa17.47■□□□□ 0.39
AP1S3-206ENST00000443700 L1RE1Q9UN81 338 aa17.47■□□□□ 0.39
AP1S3-206ENST00000443700 TACC3Q9Y6A5 838 aa17.47■□□□□ 0.39
AP1S3-206ENST00000443700 DUOX1Q9NRD9 1551 aa17.47■□□□□ 0.39
AP1S3-206ENST00000443700 ITGB4P16144 1822 aa17.46■□□□□ 0.39
AP1S3-206ENST00000443700 GPTP24298 496 aa17.46■□□□□ 0.39
AP1S3-206ENST00000443700 PNKPQ96T60 521 aa17.46■□□□□ 0.39
AP1S3-206ENST00000443700 RMND1Q9NWS8 449 aa17.46■□□□□ 0.39
AP1S3-206ENST00000443700 RREB1Q92766 1687 aa17.46■□□□□ 0.39
AP1S3-206ENST00000443700 STRCP1A6NGW2 1772 aa17.46■□□□□ 0.38
AP1S3-206ENST00000443700 A0A087X0B3 334 aa17.45■□□□□ 0.38
AP1S3-206ENST00000443700 N4BP3O15049 544 aa17.45■□□□□ 0.38
AP1S3-206ENST00000443700 PRPF3O43395 683 aaKnown RBP17.45■□□□□ 0.38
AP1S3-206ENST00000443700 RPS6KA5O75582 802 aa17.45■□□□□ 0.38
AP1S3-206ENST00000443700 FXR1P51114 621 aaKnown RBP eCLIP17.45■□□□□ 0.38
AP1S3-206ENST00000443700 PPARAQ07869 468 aa17.45■□□□□ 0.38
AP1S3-206ENST00000443700 RASGRF1Q13972 1273 aa17.45■□□□□ 0.38
AP1S3-206ENST00000443700 MCM6Q14566 821 aa17.45■□□□□ 0.38
AP1S3-206ENST00000443700 LCORLQ8N3X6 602 aa17.45■□□□□ 0.38
AP1S3-206ENST00000443700 CCDC148Q8NFR7 591 aa17.45■□□□□ 0.38
AP1S3-206ENST00000443700 EPSTI1Q96J88 318 aa17.45■□□□□ 0.38
AP1S3-206ENST00000443700 MED4Q9NPJ6 270 aa17.45■□□□□ 0.38
AP1S3-206ENST00000443700 CALM1P0DP23 149 aa17.45■□□□□ 0.38
AP1S3-206ENST00000443700 CALM2P0DP24 149 aa17.45■□□□□ 0.38
AP1S3-206ENST00000443700 CALM3P0DP25 149 aa17.45■□□□□ 0.38
AP1S3-206ENST00000443700 PAK1Q13153 545 aa17.45■□□□□ 0.38
AP1S3-206ENST00000443700 KRT31Q15323 416 aa17.45■□□□□ 0.38
AP1S3-206ENST00000443700 WDR93Q6P2C0 686 aa17.45■□□□□ 0.38
AP1S3-206ENST00000443700 SYNE4Q8N205 404 aa17.45■□□□□ 0.38
AP1S3-206ENST00000443700 CCDC82Q8N4S0 544 aa17.45■□□□□ 0.38
AP1S3-206ENST00000443700 ACRBPQ8NEB7 543 aa17.45■□□□□ 0.38
AP1S3-206ENST00000443700 NUP88Q99567 741 aaPredicted RBP17.45■□□□□ 0.38
AP1S3-206ENST00000443700 RASSF4Q9H2L5 321 aa17.45■□□□□ 0.38
AP1S3-206ENST00000443700 ABCB6Q9NP58 842 aa17.45■□□□□ 0.38
AP1S3-206ENST00000443700 ANAPC4Q9UJX5 808 aa17.45■□□□□ 0.38
AP1S3-206ENST00000443700 TNKSO95271 1327 aa17.45■□□□□ 0.38
AP1S3-206ENST00000443700 LAMB2P55268 1798 aa17.44■□□□□ 0.38
AP1S3-206ENST00000443700 LRRC10BA6NIK2 292 aa17.44■□□□□ 0.38
AP1S3-206ENST00000443700 GTPBP6O43824 516 aaPredicted RBP17.44■□□□□ 0.38
AP1S3-206ENST00000443700 COPB1P53618 953 aaKnown RBP17.44■□□□□ 0.38
AP1S3-206ENST00000443700 ATP2C1P98194 919 aaPredicted RBP17.44■□□□□ 0.38
AP1S3-206ENST00000443700 SEC23AQ15436 765 aa17.44■□□□□ 0.38
AP1S3-206ENST00000443700 HLFQ16534 295 aa17.44■□□□□ 0.38
AP1S3-206ENST00000443700 MAP9Q49MG5 647 aa17.44■□□□□ 0.38
AP1S3-206ENST00000443700 TTC38Q5R3I4 469 aa17.44■□□□□ 0.38
AP1S3-206ENST00000443700 VIPAS39Q9H9C1 493 aa17.44■□□□□ 0.38
AP1S3-206ENST00000443700 MYO6Q9UM54 1294 aa17.44■□□□□ 0.38
AP1S3-206ENST00000443700 ERVK-24P63145 666 aa17.43■□□□□ 0.38
AP1S3-206ENST00000443700 CASP8Q14790 479 aa17.43■□□□□ 0.38
AP1S3-206ENST00000443700 RRAGBQ5VZM2 374 aa17.43■□□□□ 0.38
AP1S3-206ENST00000443700 CATIPQ7Z7H3 387 aa17.43■□□□□ 0.38
AP1S3-206ENST00000443700 CTCFLQ8NI51 663 aaPredicted RBP17.43■□□□□ 0.38
AP1S3-206ENST00000443700 CDC5LQ99459 802 aaKnown RBP17.43■□□□□ 0.38
AP1S3-206ENST00000443700 VPS54Q9P1Q0 977 aa17.43■□□□□ 0.38
AP1S3-206ENST00000443700 PRKAB2O43741 272 aa17.43■□□□□ 0.38
AP1S3-206ENST00000443700 RHOXF2BP0C7M4 288 aa17.43■□□□□ 0.38
AP1S3-206ENST00000443700 CCT6AP40227 531 aaKnown RBP17.43■□□□□ 0.38
AP1S3-206ENST00000443700 TRAPPC10P48553 1259 aa17.43■□□□□ 0.38
AP1S3-206ENST00000443700 VSNL1P62760 191 aa17.43■□□□□ 0.38
AP1S3-206ENST00000443700 CMTR1Q8N1G2 835 aaKnown RBP17.43■□□□□ 0.38
AP1S3-206ENST00000443700 EHBP1Q8NDI1 1231 aa17.43■□□□□ 0.38
AP1S3-206ENST00000443700 RPGRIP1Q96KN7 1286 aa17.43■□□□□ 0.38
AP1S3-206ENST00000443700 RHOXF2Q9BQY4 288 aa17.43■□□□□ 0.38
AP1S3-206ENST00000443700 MKRN1Q9UHC7 482 aaKnown RBP17.43■□□□□ 0.38
AP1S3-206ENST00000443700 ERVV-1B6SEH8 477 aa17.42■□□□□ 0.38
AP1S3-206ENST00000443700 DDAH1O94760 285 aa17.42■□□□□ 0.38
AP1S3-206ENST00000443700 PCP11498 1178 aaKnown RBP17.42■□□□□ 0.38
AP1S3-206ENST00000443700 ARHGAP25P42331 645 aa17.42■□□□□ 0.38
AP1S3-206ENST00000443700 AMPD2Q01433 879 aa17.42■□□□□ 0.38
AP1S3-206ENST00000443700 PKN1Q16512 942 aa17.42■□□□□ 0.38
AP1S3-206ENST00000443700 NOM1Q5C9Z4 860 aaKnown RBP17.42■□□□□ 0.38
AP1S3-206ENST00000443700 TCP11X2Q5H9J9 407 aa17.42■□□□□ 0.38
AP1S3-206ENST00000443700 ZNF658Q5TYW1 1059 aaPredicted RBP17.42■□□□□ 0.38
AP1S3-206ENST00000443700 SRLQ86TD4 932 aa17.42■□□□□ 0.38
AP1S3-206ENST00000443700 GOLGA6L1Q8N7Z2 621 aa17.42■□□□□ 0.38
AP1S3-206ENST00000443700 HAUS4Q9H6D7 363 aa17.42■□□□□ 0.38
AP1S3-206ENST00000443700 XDHP47989 1333 aa17.42■□□□□ 0.38
AP1S3-206ENST00000443700 A0A0U1RQJ8 604 aa17.41■□□□□ 0.38
AP1S3-206ENST00000443700 KCNJ18B7U540 433 aa17.41■□□□□ 0.38
AP1S3-206ENST00000443700 GYS2P54840 703 aa17.41■□□□□ 0.38
AP1S3-206ENST00000443700 CKAP4Q07065 602 aaKnown RBP17.41■□□□□ 0.38
AP1S3-206ENST00000443700 KCNJ12Q14500 433 aa17.41■□□□□ 0.38
AP1S3-206ENST00000443700 E2F4Q16254 413 aa17.41■□□□□ 0.38
AP1S3-206ENST00000443700 SMYD4Q8IYR2 804 aaPredicted RBP17.41■□□□□ 0.38
AP1S3-206ENST00000443700 ATRIPQ8WXE1 791 aa17.41■□□□□ 0.38
AP1S3-206ENST00000443700 CCDC102AQ96A19 550 aa17.41■□□□□ 0.38
AP1S3-206ENST00000443700 TRERF1Q96PN7 1200 aa17.41■□□□□ 0.38
AP1S3-206ENST00000443700 FAN1Q9Y2M0 1017 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms