RNA–Protein interactions for RNA: ENST00000443537.2

R3HDM1-210, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 710 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-210ENST00000443537 HLFQ16534 295 aa8.77□□□□□ -1.01
R3HDM1-210ENST00000443537 USPL1Q5W0Q7 1092 aa8.77□□□□□ -1.01
R3HDM1-210ENST00000443537 PDE12Q6L8Q7 609 aaKnown RBP8.77□□□□□ -1.01
R3HDM1-210ENST00000443537 NPAS3Q8IXF0 933 aa8.77□□□□□ -1.01
R3HDM1-210ENST00000443537 DCTPP1Q9H773 170 aa8.77□□□□□ -1.01
R3HDM1-210ENST00000443537 ELP3Q9H9T3 547 aa8.77□□□□□ -1.01
R3HDM1-210ENST00000443537 UBN2Q6ZU65 1347 aa8.77□□□□□ -1.01
R3HDM1-210ENST00000443537 TREHO43280 583 aa8.76□□□□□ -1.01
R3HDM1-210ENST00000443537 NTSR2O95665 410 aa8.76□□□□□ -1.01
R3HDM1-210ENST00000443537 GRIN2CQ14957 1233 aa8.76□□□□□ -1.01
R3HDM1-210ENST00000443537 EZH2Q15910 746 aaKnown RBP8.76□□□□□ -1.01
R3HDM1-210ENST00000443537 TTC39BQ5VTQ0 682 aaPredicted RBP8.76□□□□□ -1.01
R3HDM1-210ENST00000443537 RAB44Q7Z6P3 723 aaPredicted RBP8.76□□□□□ -1.01
R3HDM1-210ENST00000443537 NPAS4Q8IUM7 802 aa8.76□□□□□ -1.01
R3HDM1-210ENST00000443537 BHMTQ93088 406 aa8.76□□□□□ -1.01
R3HDM1-210ENST00000443537 GSX2Q9BZM3 304 aa8.76□□□□□ -1.01
R3HDM1-210ENST00000443537 BICC1Q9H694 974 aaKnown RBP8.76□□□□□ -1.01
R3HDM1-210ENST00000443537 C11orf16Q9NQ32 467 aa8.76□□□□□ -1.01
R3HDM1-210ENST00000443537 NOP58Q9Y2X3 529 aaKnown RBP8.76□□□□□ -1.01
R3HDM1-210ENST00000443537 LRP5O75197 1615 aa8.76□□□□□ -1.01
R3HDM1-210ENST00000443537 IRS4O14654 1257 aaPredicted RBP8.75□□□□□ -1.01
R3HDM1-210ENST00000443537 TERTO14746 1132 aaKnown RBP8.75□□□□□ -1.01
R3HDM1-210ENST00000443537 NPHP1O15259 732 aa8.75□□□□□ -1.01
R3HDM1-210ENST00000443537 RARAP10276 462 aa8.75□□□□□ -1.01
R3HDM1-210ENST00000443537 BMP4P12644 408 aa8.75□□□□□ -1.01
R3HDM1-210ENST00000443537 GYS1P13807 737 aa8.75□□□□□ -1.01
R3HDM1-210ENST00000443537 MX2P20592 715 aa8.75□□□□□ -1.01
R3HDM1-210ENST00000443537 GPTP24298 496 aa8.75□□□□□ -1.01
R3HDM1-210ENST00000443537 CTSWP56202 376 aa8.75□□□□□ -1.01
R3HDM1-210ENST00000443537 ST5P78524 1137 aa8.75□□□□□ -1.01
R3HDM1-210ENST00000443537 CTBSQ01459 385 aa8.75□□□□□ -1.01
R3HDM1-210ENST00000443537 ZNF827Q17R98 1081 aa8.75□□□□□ -1.01
R3HDM1-210ENST00000443537 CCDC152Q4G0S7 254 aa8.75□□□□□ -1.01
R3HDM1-210ENST00000443537 SLC10A5Q5PT55 438 aa8.75□□□□□ -1.01
R3HDM1-210ENST00000443537 NBPF5PQ86XG9 351 aaPredicted RBP8.75□□□□□ -1.01
R3HDM1-210ENST00000443537 CNBD1Q8NA66 436 aa8.75□□□□□ -1.01
R3HDM1-210ENST00000443537 SUCLG2Q96I99 432 aa8.75□□□□□ -1.01
R3HDM1-210ENST00000443537 SLC30A3Q99726 388 aa8.75□□□□□ -1.01
R3HDM1-210ENST00000443537 COPRSQ9NQ92 184 aa8.75□□□□□ -1.01
R3HDM1-210ENST00000443537 PNPLA7Q6ZV29 1317 aa8.75□□□□□ -1.01
R3HDM1-210ENST00000443537 CIAO1O76071 339 aa8.74□□□□□ -1.01
R3HDM1-210ENST00000443537 EGFRP00533 1210 aa8.74□□□□□ -1.01
R3HDM1-210ENST00000443537 CSF1RP07333 972 aa8.74□□□□□ -1.01
R3HDM1-210ENST00000443537 NFKB1P19838 968 aa8.74□□□□□ -1.01
R3HDM1-210ENST00000443537 TARSP26639 723 aaKnown RBP8.74□□□□□ -1.01
R3HDM1-210ENST00000443537 FOXO4P98177 505 aa8.74□□□□□ -1.01
R3HDM1-210ENST00000443537 NUCB1Q02818 461 aa8.74□□□□□ -1.01
R3HDM1-210ENST00000443537 IFIT5Q13325 482 aaKnown RBP8.74□□□□□ -1.01
R3HDM1-210ENST00000443537 CCDC57Q2TAC2 916 aa8.74□□□□□ -1.01
R3HDM1-210ENST00000443537 EAPPQ56P03 285 aaPredicted RBP8.74□□□□□ -1.01
R3HDM1-210ENST00000443537 SUSD4Q5VX71 490 aa8.74□□□□□ -1.01
R3HDM1-210ENST00000443537 TBC1D9BQ66K14 1250 aa8.74□□□□□ -1.01
R3HDM1-210ENST00000443537 SIRT2Q8IXJ6 389 aa8.74□□□□□ -1.01
R3HDM1-210ENST00000443537 KIF1BPQ96EK5 621 aa8.74□□□□□ -1.01
R3HDM1-210ENST00000443537 TMEM63CQ9P1W3 806 aa8.74□□□□□ -1.01
R3HDM1-210ENST00000443537 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.74□□□□□ -1.01
R3HDM1-210ENST00000443537 KIF13BQ9NQT8 1826 aa8.73□□□□□ -1.01
R3HDM1-210ENST00000443537 PHACTR2O75167 634 aa8.73□□□□□ -1.01
R3HDM1-210ENST00000443537 TNFRSF21O75509 655 aa8.73□□□□□ -1.01
R3HDM1-210ENST00000443537 IGHDP01880 384 aa8.73□□□□□ -1.01
R3HDM1-210ENST00000443537 P4HBP07237 508 aaKnown RBP8.73□□□□□ -1.01
R3HDM1-210ENST00000443537 TM4SF1P30408 202 aa8.73□□□□□ -1.01
R3HDM1-210ENST00000443537 ORC1Q13415 861 aa8.73□□□□□ -1.01
R3HDM1-210ENST00000443537 DSC3Q14574 896 aa8.73□□□□□ -1.01
R3HDM1-210ENST00000443537 NFIXQ14938 502 aa8.73□□□□□ -1.01
R3HDM1-210ENST00000443537 SF3B3Q15393 1217 aaKnown RBP8.73□□□□□ -1.01
R3HDM1-210ENST00000443537 LMBR1LQ6UX01 489 aa8.73□□□□□ -1.01
R3HDM1-210ENST00000443537 XKR5Q6UX68 686 aa8.73□□□□□ -1.01
R3HDM1-210ENST00000443537 COL23A1Q86Y22 540 aaPredicted RBP8.73□□□□□ -1.01
R3HDM1-210ENST00000443537 SNX29Q8TEQ0 813 aa8.73□□□□□ -1.01
R3HDM1-210ENST00000443537 ALKBH8Q96BT7 664 aaKnown RBP8.73□□□□□ -1.01
R3HDM1-210ENST00000443537 FAM89AQ96GI7 184 aa8.73□□□□□ -1.01
R3HDM1-210ENST00000443537 KAZALD1Q96I82 304 aa8.73□□□□□ -1.01
R3HDM1-210ENST00000443537 CDC5LQ99459 802 aaKnown RBP8.73□□□□□ -1.01
R3HDM1-210ENST00000443537 LRRCC1Q9C099 1032 aa8.73□□□□□ -1.01
R3HDM1-210ENST00000443537 ABI2Q9NYB9 513 aaPredicted RBP8.73□□□□□ -1.01
R3HDM1-210ENST00000443537 SRP68Q9UHB9 627 aaKnown RBP8.73□□□□□ -1.01
R3HDM1-210ENST00000443537 FOXD3Q9UJU5 478 aaPredicted RBP8.73□□□□□ -1.01
R3HDM1-210ENST00000443537 HCN2Q9UL51 889 aa8.73□□□□□ -1.01
R3HDM1-210ENST00000443537 NSFL1CQ9UNZ2 370 aaKnown RBP8.73□□□□□ -1.01
R3HDM1-210ENST00000443537 AK9Q5TCS8 1911 aa8.73□□□□□ -1.01
R3HDM1-210ENST00000443537 SPEF2Q9C093 1822 aa8.73□□□□□ -1.01
R3HDM1-210ENST00000443537 ARAP2Q8WZ64 1704 aa8.72□□□□□ -1.01
R3HDM1-210ENST00000443537 A0A1B0GUL6 1792 aa8.72□□□□□ -1.01
R3HDM1-210ENST00000443537 DLEC1Q9Y238 1755 aa8.72□□□□□ -1.01
R3HDM1-210ENST00000443537 PNMA6EA0A0J9YXQ4 647 aa8.72□□□□□ -1.01
R3HDM1-210ENST00000443537 ANKRD18BA2A2Z9 1011 aa8.72□□□□□ -1.01
R3HDM1-210ENST00000443537 EIF5BO60841 1220 aaKnown RBP8.72□□□□□ -1.01
R3HDM1-210ENST00000443537 SURF6O75683 361 aaKnown RBP8.72□□□□□ -1.01
R3HDM1-210ENST00000443537 IL15P40933 162 aaPredicted RBP8.72□□□□□ -1.01
R3HDM1-210ENST00000443537 ATP2B2Q01814 1243 aa8.72□□□□□ -1.01
R3HDM1-210ENST00000443537 FMR1Q06787 632 aaKnown RBP eCLIP8.72□□□□□ -1.01
R3HDM1-210ENST00000443537 G3BP1Q13283 466 aaKnown RBP eCLIP8.72□□□□□ -1.01
R3HDM1-210ENST00000443537 TAF7LQ5H9L4 462 aa8.72□□□□□ -1.01
R3HDM1-210ENST00000443537 TMC4Q7Z404 712 aa8.72□□□□□ -1.01
R3HDM1-210ENST00000443537 CHD1LQ86WJ1 897 aa8.72□□□□□ -1.01
R3HDM1-210ENST00000443537 GPR161Q8N6U8 529 aaKnown RBP8.72□□□□□ -1.01
R3HDM1-210ENST00000443537 TTLL11Q8NHH1 800 aa8.72□□□□□ -1.01
R3HDM1-210ENST00000443537 GIPC2Q8TF65 315 aa8.72□□□□□ -1.01
R3HDM1-210ENST00000443537 IGFLR1Q9H665 355 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms