RNA–Protein interactions for RNA: ENST00000442461.6

LIN54-202, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 4,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-202ENST00000442461 DDX23Q9BUQ8 820 aaKnown RBP11.38□□□□□ -0.59
LIN54-202ENST00000442461 MAP3K2Q9Y2U5 619 aa11.38□□□□□ -0.59
LIN54-202ENST00000442461 GAPVD1Q14C86 1478 aa11.37□□□□□ -0.59
LIN54-202ENST00000442461 PTPRGP23470 1445 aa11.37□□□□□ -0.59
LIN54-202ENST00000442461 PCYT1AP49585 367 aa11.37□□□□□ -0.59
LIN54-202ENST00000442461 EIF3BP55884 814 aaKnown RBP11.37□□□□□ -0.59
LIN54-202ENST00000442461 APLFQ8IW19 511 aaPredicted RBP11.37□□□□□ -0.59
LIN54-202ENST00000442461 ZNF473Q8WTR7 871 aaKnown RBP11.37□□□□□ -0.59
LIN54-202ENST00000442461 KRT23Q9C075 422 aa11.37□□□□□ -0.59
LIN54-202ENST00000442461 PAPOLBQ9NRJ5 636 aaKnown RBP11.37□□□□□ -0.59
LIN54-202ENST00000442461 ANGPTL2Q9UKU9 493 aa11.37□□□□□ -0.59
LIN54-202ENST00000442461 PA2G4Q9UQ80 394 aaKnown RBP11.37□□□□□ -0.59
LIN54-202ENST00000442461 HSPA1LP34931 641 aa11.37□□□□□ -0.59
LIN54-202ENST00000442461 PLCB3Q01970 1234 aa11.37□□□□□ -0.59
LIN54-202ENST00000442461 PLCB4Q15147 1175 aa11.37□□□□□ -0.59
LIN54-202ENST00000442461 KRT40Q6A162 431 aa11.37□□□□□ -0.59
LIN54-202ENST00000442461 RCSD1Q6JBY9 416 aa11.37□□□□□ -0.59
LIN54-202ENST00000442461 ARMCX5Q6P1M9 558 aa11.37□□□□□ -0.59
LIN54-202ENST00000442461 TOGARAM2Q6ZUX3 1019 aa11.37□□□□□ -0.59
LIN54-202ENST00000442461 RRAGAQ7L523 313 aa11.37□□□□□ -0.59
LIN54-202ENST00000442461 DIS3L2Q8IYB7 885 aaKnown RBP11.37□□□□□ -0.59
LIN54-202ENST00000442461 LRRC8CQ8TDW0 803 aa11.37□□□□□ -0.59
LIN54-202ENST00000442461 RUNDC3BQ96NL0 473 aa11.37□□□□□ -0.59
LIN54-202ENST00000442461 MYD88Q99836 296 aa11.37□□□□□ -0.59
LIN54-202ENST00000442461 CNNM2Q9H8M5 875 aa11.37□□□□□ -0.59
LIN54-202ENST00000442461 XAB2Q9HCS7 855 aaKnown RBP11.37□□□□□ -0.59
LIN54-202ENST00000442461 SATB2Q9UPW6 733 aa11.37□□□□□ -0.59
LIN54-202ENST00000442461 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.37□□□□□ -0.59
LIN54-202ENST00000442461 RAD23BP54727 409 aa11.37□□□□□ -0.59
LIN54-202ENST00000442461 IL9RQ01113 521 aa11.37□□□□□ -0.59
LIN54-202ENST00000442461 SLC7A5Q01650 507 aa11.37□□□□□ -0.59
LIN54-202ENST00000442461 CYB5D1Q6P9G0 228 aa11.37□□□□□ -0.59
LIN54-202ENST00000442461 CCDC105Q8IYK2 499 aa11.37□□□□□ -0.59
LIN54-202ENST00000442461 UBL4BQ8N7F7 174 aa11.37□□□□□ -0.59
LIN54-202ENST00000442461 ENOX1Q8TC92 643 aaKnown RBP11.37□□□□□ -0.59
LIN54-202ENST00000442461 TEKT4Q8WW24 435 aa11.37□□□□□ -0.59
LIN54-202ENST00000442461 DAAM1Q9Y4D1 1078 aa11.37□□□□□ -0.59
LIN54-202ENST00000442461 ALDH1L1O75891 902 aa11.36□□□□□ -0.59
LIN54-202ENST00000442461 ATP5HO75947 161 aa11.36□□□□□ -0.59
LIN54-202ENST00000442461 KRT2P35908 639 aa11.36□□□□□ -0.59
LIN54-202ENST00000442461 PAPOLAP51003 745 aaKnown RBP11.36□□□□□ -0.59
LIN54-202ENST00000442461 KLHL30Q0D2K2 578 aa11.36□□□□□ -0.59
LIN54-202ENST00000442461 TRPC3Q13507 836 aa11.36□□□□□ -0.59
LIN54-202ENST00000442461 ASIC2Q16515 512 aa11.36□□□□□ -0.59
LIN54-202ENST00000442461 DTHD1Q6ZMT9 781 aa11.36□□□□□ -0.59
LIN54-202ENST00000442461 B4GALNT2Q8NHY0 566 aa11.36□□□□□ -0.59
LIN54-202ENST00000442461 UHMK1Q8TAS1 419 aaKnown RBP11.36□□□□□ -0.59
LIN54-202ENST00000442461 NFU1Q9UMS0 254 aa11.36□□□□□ -0.59
LIN54-202ENST00000442461 SNAPC4Q5SXM2 1469 aa11.36□□□□□ -0.59
LIN54-202ENST00000442461 EPRSP07814 1512 aaKnown RBP11.36□□□□□ -0.59
LIN54-202ENST00000442461 EXOC5O00471 708 aa11.36□□□□□ -0.59
LIN54-202ENST00000442461 NDUFA10O95299 355 aa11.36□□□□□ -0.59
LIN54-202ENST00000442461 ESRRGP62508 458 aa11.36□□□□□ -0.59
LIN54-202ENST00000442461 CUL5Q93034 780 aa11.36□□□□□ -0.59
LIN54-202ENST00000442461 BICD1Q96G01 975 aa11.36□□□□□ -0.59
LIN54-202ENST00000442461 DYDC2Q96IM9 177 aa11.36□□□□□ -0.59
LIN54-202ENST00000442461 PUS7Q96PZ0 661 aaKnown RBP11.36□□□□□ -0.59
LIN54-202ENST00000442461 FAM207AQ9NSI2 230 aaPredicted RBP11.36□□□□□ -0.59
LIN54-202ENST00000442461 ATG3Q9NT62 314 aa11.36□□□□□ -0.59
LIN54-202ENST00000442461 RTEL1-TNFRSF6BF6WH68 1400 aa11.36□□□□□ -0.59
LIN54-202ENST00000442461 PDS5BQ9NTI5 1447 aa11.36□□□□□ -0.59
LIN54-202ENST00000442461 H7C1D1 291 aa11.36□□□□□ -0.59
LIN54-202ENST00000442461 USP5P45974 858 aa11.36□□□□□ -0.59
LIN54-202ENST00000442461 PHEXP78562 749 aa11.36□□□□□ -0.59
LIN54-202ENST00000442461 PTH1RQ03431 593 aa11.36□□□□□ -0.59
LIN54-202ENST00000442461 KRT24Q2M2I5 525 aa11.36□□□□□ -0.59
LIN54-202ENST00000442461 GLE1Q53GS7 698 aaKnown RBP11.36□□□□□ -0.59
LIN54-202ENST00000442461 RBM26Q5T8P6 1007 aaKnown RBP11.36□□□□□ -0.59
LIN54-202ENST00000442461 UHRF1BP1Q6BDS2 1440 aa11.36□□□□□ -0.59
LIN54-202ENST00000442461 GFM2Q969S9 779 aaKnown RBP11.36□□□□□ -0.59
LIN54-202ENST00000442461 TSNARE1Q96NA8 513 aa11.36□□□□□ -0.59
LIN54-202ENST00000442461 PARP3Q9Y6F1 533 aa11.36□□□□□ -0.59
LIN54-202ENST00000442461 HECW1Q76N89 1606 aa11.36□□□□□ -0.59
LIN54-202ENST00000442461 TEX14Q8IWB6 1497 aa11.36□□□□□ -0.59
LIN54-202ENST00000442461 TARSL2A2RTX5 802 aaKnown RBP11.35□□□□□ -0.59
LIN54-202ENST00000442461 I3L4J1 428 aa11.35□□□□□ -0.59
LIN54-202ENST00000442461 ZPR1O75312 459 aa11.35□□□□□ -0.59
LIN54-202ENST00000442461 CCND1P24385 295 aa11.35□□□□□ -0.59
LIN54-202ENST00000442461 GUCY1A3Q02108 690 aa11.35□□□□□ -0.59
LIN54-202ENST00000442461 MORC3Q14149 939 aa11.35□□□□□ -0.59
LIN54-202ENST00000442461 PSMD6Q15008 389 aa11.35□□□□□ -0.59
LIN54-202ENST00000442461 SLC44A4Q53GD3 710 aa11.35□□□□□ -0.59
LIN54-202ENST00000442461 CCDC93Q567U6 631 aa11.35□□□□□ -0.59
LIN54-202ENST00000442461 ANKRD13CQ8N6S4 541 aa11.35□□□□□ -0.59
LIN54-202ENST00000442461 RAD54L2Q9Y4B4 1467 aa11.35□□□□□ -0.59
LIN54-202ENST00000442461 SPECC1L-ADORA2AF8WAN1 911 aa11.35□□□□□ -0.59
LIN54-202ENST00000442461 BUB1O43683 1085 aa11.35□□□□□ -0.59
LIN54-202ENST00000442461 N4BP1O75113 896 aaKnown RBP11.35□□□□□ -0.59
LIN54-202ENST00000442461 MSH2P43246 934 aa11.35□□□□□ -0.59
LIN54-202ENST00000442461 CTCFP49711 727 aaPredicted RBP11.35□□□□□ -0.59
LIN54-202ENST00000442461 COPB1P53618 953 aaKnown RBP11.35□□□□□ -0.59
LIN54-202ENST00000442461 DHX9Q08211 1270 aaKnown RBP11.35□□□□□ -0.59
LIN54-202ENST00000442461 PDE4DQ08499 809 aa11.35□□□□□ -0.59
LIN54-202ENST00000442461 BEND6Q5SZJ8 279 aaPredicted RBP11.35□□□□□ -0.59
LIN54-202ENST00000442461 TUBB6Q9BUF5 446 aa11.35□□□□□ -0.59
LIN54-202ENST00000442461 PLAAQ9Y263 795 aa11.35□□□□□ -0.59
LIN54-202ENST00000442461 PNMA6EA0A0J9YXQ4 647 aa11.35□□□□□ -0.59
LIN54-202ENST00000442461 TRAF5O00463 557 aa11.35□□□□□ -0.59
LIN54-202ENST00000442461 SPOPO43791 374 aa11.35□□□□□ -0.59
LIN54-202ENST00000442461 GAS8O95995 478 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms