RNA–Protein interactions for RNA: ENST00000442218.2

SLC48A1-201, Transcript of solute carrier family 48 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC48A1, Length 3,010 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-201ENST00000442218 ZNF18P17022 549 aa14.91□□□□□ -0.02
SLC48A1-201ENST00000442218 DHX8Q14562 1220 aaKnown RBP14.91□□□□□ -0.02
SLC48A1-201ENST00000442218 RILPL1Q5EBL4 403 aa14.91□□□□□ -0.02
SLC48A1-201ENST00000442218 RRAGBQ5VZM2 374 aa14.91□□□□□ -0.02
SLC48A1-201ENST00000442218 CC2D1AQ6P1N0 951 aaPredicted RBP14.91□□□□□ -0.02
SLC48A1-201ENST00000442218 ENAHQ8N8S7 591 aaPredicted RBP14.91□□□□□ -0.02
SLC48A1-201ENST00000442218 PAGE5Q96GU1 130 aa14.91□□□□□ -0.02
SLC48A1-201ENST00000442218 SLF1Q9BQI6 1058 aa14.91□□□□□ -0.02
SLC48A1-201ENST00000442218 DEXIO95424 95 aa14.91□□□□□ -0.02
SLC48A1-201ENST00000442218 LIFRP42702 1097 aa14.91□□□□□ -0.02
SLC48A1-201ENST00000442218 PTGDRQ13258 359 aa14.91□□□□□ -0.02
SLC48A1-201ENST00000442218 TXNRD3Q86VQ6 643 aa14.91□□□□□ -0.02
SLC48A1-201ENST00000442218 RASSF8Q8NHQ8 419 aa14.91□□□□□ -0.02
SLC48A1-201ENST00000442218 GPKOWQ92917 476 aaPredicted RBP eCLIP14.91□□□□□ -0.02
SLC48A1-201ENST00000442218 KIFC2Q96AC6 838 aa14.91□□□□□ -0.02
SLC48A1-201ENST00000442218 CPVLQ9H3G5 476 aa14.91□□□□□ -0.02
SLC48A1-201ENST00000442218 HOOK1Q9UJC3 728 aaKnown RBP14.91□□□□□ -0.02
SLC48A1-201ENST00000442218 GDAQ9Y2T3 454 aa14.91□□□□□ -0.02
SLC48A1-201ENST00000442218 ZRANB2O95218 330 aaKnown RBP eCLIP14.9□□□□□ -0.02
SLC48A1-201ENST00000442218 UQCRFS1P1P0C7P4 283 aa14.9□□□□□ -0.02
SLC48A1-201ENST00000442218 IGHMBP2P38935 993 aaKnown RBP14.9□□□□□ -0.02
SLC48A1-201ENST00000442218 MRPS25P82663 173 aaKnown RBP14.9□□□□□ -0.02
SLC48A1-201ENST00000442218 TBX2Q13207 712 aaPredicted RBP14.9□□□□□ -0.02
SLC48A1-201ENST00000442218 RASGRP2Q7LDG7 609 aa14.9□□□□□ -0.02
SLC48A1-201ENST00000442218 KRT23Q9C075 422 aa14.9□□□□□ -0.02
SLC48A1-201ENST00000442218 MRFAP1Q9Y605 127 aa14.9□□□□□ -0.02
SLC48A1-201ENST00000442218 THSD7AQ9UPZ6 1657 aa14.9□□□□□ -0.02
SLC48A1-201ENST00000442218 N4BP3O15049 544 aa14.9□□□□□ -0.02
SLC48A1-201ENST00000442218 ZMYND10O75800 440 aa14.9□□□□□ -0.02
SLC48A1-201ENST00000442218 CUL4BQ13620 913 aa14.9□□□□□ -0.02
SLC48A1-201ENST00000442218 SMC1AQ14683 1233 aaKnown RBP14.9□□□□□ -0.02
SLC48A1-201ENST00000442218 IFIT1BQ5T764 474 aaKnown RBP14.9□□□□□ -0.02
SLC48A1-201ENST00000442218 EFCAB8A8MWE9 144 aa14.9□□□□□ -0.02
SLC48A1-201ENST00000442218 MAP3K9P80192 1104 aa14.9□□□□□ -0.02
SLC48A1-201ENST00000442218 NR1I3Q14994 352 aa14.9□□□□□ -0.02
SLC48A1-201ENST00000442218 FKBP15Q5T1M5 1219 aa14.9□□□□□ -0.02
SLC48A1-201ENST00000442218 SLC35F6Q8N357 371 aa14.9□□□□□ -0.02
SLC48A1-201ENST00000442218 PNKPQ96T60 521 aa14.9□□□□□ -0.02
SLC48A1-201ENST00000442218 NUP88Q99567 741 aaPredicted RBP14.9□□□□□ -0.02
SLC48A1-201ENST00000442218 SRPRBQ9Y5M8 271 aaKnown RBP14.9□□□□□ -0.02
SLC48A1-201ENST00000442218 H3BQF6 201 aa14.89□□□□□ -0.03
SLC48A1-201ENST00000442218 NTSR2O95665 410 aa14.89□□□□□ -0.03
SLC48A1-201ENST00000442218 PLCD1P51178 756 aa14.89□□□□□ -0.03
SLC48A1-201ENST00000442218 PKN1Q16512 942 aa14.89□□□□□ -0.03
SLC48A1-201ENST00000442218 NCAPH2Q6IBW4 605 aa14.89□□□□□ -0.03
SLC48A1-201ENST00000442218 SEPT12Q8IYM1 358 aa14.89□□□□□ -0.03
SLC48A1-201ENST00000442218 MLKLQ8NB16 471 aa14.89□□□□□ -0.03
SLC48A1-201ENST00000442218 ENOX1Q8TC92 643 aaKnown RBP14.89□□□□□ -0.03
SLC48A1-201ENST00000442218 UIMC1Q96RL1 719 aa14.89□□□□□ -0.03
SLC48A1-201ENST00000442218 KCND1Q9NSA2 647 aa14.89□□□□□ -0.03
SLC48A1-201ENST00000442218 AATFQ9NY61 560 aaKnown RBP eCLIP14.89□□□□□ -0.03
SLC48A1-201ENST00000442218 C4AP0C0L4 1744 aa14.89□□□□□ -0.03
SLC48A1-201ENST00000442218 C4BP0C0L5 1744 aa14.89□□□□□ -0.03
SLC48A1-201ENST00000442218 USP17L12C9JPN9 530 aa14.89□□□□□ -0.03
SLC48A1-201ENST00000442218 USP17L21D6R901 530 aa14.89□□□□□ -0.03
SLC48A1-201ENST00000442218 ANKRD65E5RJM6 399 aa14.89□□□□□ -0.03
SLC48A1-201ENST00000442218 STX10O60499 249 aa14.89□□□□□ -0.03
SLC48A1-201ENST00000442218 CCDC175P0C221 793 aa14.89□□□□□ -0.03
SLC48A1-201ENST00000442218 PLEKHA4Q9H4M7 779 aa14.89□□□□□ -0.03
SLC48A1-201ENST00000442218 FAM53CQ9NYF3 392 aa14.89□□□□□ -0.03
SLC48A1-201ENST00000442218 HDAC6Q9UBN7 1215 aa14.89□□□□□ -0.03
SLC48A1-201ENST00000442218 RREB1Q92766 1687 aa14.88□□□□□ -0.03
SLC48A1-201ENST00000442218 MAGEB6P1A0A0J9YX57 407 aa14.88□□□□□ -0.03
SLC48A1-201ENST00000442218 CCP110O43303 1012 aa14.88□□□□□ -0.03
SLC48A1-201ENST00000442218 PRDX5P30044 214 aa14.88□□□□□ -0.03
SLC48A1-201ENST00000442218 LMAN1P49257 510 aa14.88□□□□□ -0.03
SLC48A1-201ENST00000442218 SARSP49591 514 aaKnown RBP14.88□□□□□ -0.03
SLC48A1-201ENST00000442218 WASF1Q92558 559 aa14.88□□□□□ -0.03
SLC48A1-201ENST00000442218 CAPZA3Q96KX2 299 aa14.88□□□□□ -0.03
SLC48A1-201ENST00000442218 CHP1Q99653 195 aa14.88□□□□□ -0.03
SLC48A1-201ENST00000442218 ARFGAP3Q9NP61 516 aa14.88□□□□□ -0.03
SLC48A1-201ENST00000442218 GUCA1BQ9UMX6 200 aa14.88□□□□□ -0.03
SLC48A1-201ENST00000442218 ADGRG1Q9Y653 693 aa14.88□□□□□ -0.03
SLC48A1-201ENST00000442218 COL5A3P25940 1745 aaPredicted RBP14.88□□□□□ -0.03
SLC48A1-201ENST00000442218 BTAF1O14981 1849 aa14.88□□□□□ -0.03
SLC48A1-201ENST00000442218 ABCC12Q96J65 1359 aa14.88□□□□□ -0.03
SLC48A1-201ENST00000442218 SRGAP2O75044 1071 aa14.88□□□□□ -0.03
SLC48A1-201ENST00000442218 GYPCP04921 128 aa14.88□□□□□ -0.03
SLC48A1-201ENST00000442218 CHMP4BP1P59074 171 aa14.88□□□□□ -0.03
SLC48A1-201ENST00000442218 KCTD19Q17RG1 926 aaPredicted RBP14.88□□□□□ -0.03
SLC48A1-201ENST00000442218 RGS22Q8NE09 1264 aa14.88□□□□□ -0.03
SLC48A1-201ENST00000442218 CNNM2Q9H8M5 875 aa14.88□□□□□ -0.03
SLC48A1-201ENST00000442218 MROH5Q6ZUA9 1318 aa14.88□□□□□ -0.03
SLC48A1-201ENST00000442218 KRT2P35908 639 aa14.87□□□□□ -0.03
SLC48A1-201ENST00000442218 CCDC152Q4G0S7 254 aa14.87□□□□□ -0.03
SLC48A1-201ENST00000442218 FOXP1Q9H334 677 aaPredicted RBP14.87□□□□□ -0.03
SLC48A1-201ENST00000442218 PDE11AQ9HCR9 933 aa14.87□□□□□ -0.03
SLC48A1-201ENST00000442218 NLRP5P59047 1200 aa14.87□□□□□ -0.03
SLC48A1-201ENST00000442218 LONRF2Q1L5Z9 754 aa14.87□□□□□ -0.03
SLC48A1-201ENST00000442218 QTRT2Q9H974 415 aaKnown RBP14.87□□□□□ -0.03
SLC48A1-201ENST00000442218 FBXO3Q9UK99 471 aa14.87□□□□□ -0.03
SLC48A1-201ENST00000442218 TRPC5Q9UL62 973 aaPredicted RBP14.87□□□□□ -0.03
SLC48A1-201ENST00000442218 ERVK-24P63145 666 aa14.87□□□□□ -0.03
SLC48A1-201ENST00000442218 TBC1D9BQ66K14 1250 aa14.87□□□□□ -0.03
SLC48A1-201ENST00000442218 APTXQ7Z2E3 356 aaKnown RBP14.87□□□□□ -0.03
SLC48A1-201ENST00000442218 STAG1Q8WVM7 1258 aa14.87□□□□□ -0.03
SLC48A1-201ENST00000442218 MTRQ99707 1265 aa14.87□□□□□ -0.03
SLC48A1-201ENST00000442218 WDR19Q8NEZ3 1342 aa14.86□□□□□ -0.03
SLC48A1-201ENST00000442218 PPARDQ03181 441 aa14.86□□□□□ -0.03
SLC48A1-201ENST00000442218 KRT31Q15323 416 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms