RNA–Protein interactions for RNA: ENST00000441983.5

TRAPPC12-210, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-210ENST00000441983 STX8Q9UNK0 236 aa17.81■□□□□ 0.44
TRAPPC12-210ENST00000441983 TNKSO95271 1327 aa17.8■□□□□ 0.44
TRAPPC12-210ENST00000441983 A0A1W2PRG0 241 aa17.8■□□□□ 0.44
TRAPPC12-210ENST00000441983 ERICH2A1L162 156 aa17.8■□□□□ 0.44
TRAPPC12-210ENST00000441983 WDR46O15213 610 aaKnown RBP17.8■□□□□ 0.44
TRAPPC12-210ENST00000441983 TOP1P11387 765 aaKnown RBP17.8■□□□□ 0.44
TRAPPC12-210ENST00000441983 RASEFQ8IZ41 740 aa17.8■□□□□ 0.44
TRAPPC12-210ENST00000441983 ACER1Q8TDN7 264 aa17.8■□□□□ 0.44
TRAPPC12-210ENST00000441983 TMEM87BQ96K49 555 aa17.8■□□□□ 0.44
TRAPPC12-210ENST00000441983 TM6SF1Q9BZW5 370 aa17.8■□□□□ 0.44
TRAPPC12-210ENST00000441983 UPF2Q9HAU5 1272 aaKnown RBP17.8■□□□□ 0.44
TRAPPC12-210ENST00000441983 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.8■□□□□ 0.44
TRAPPC12-210ENST00000441983 PNMA3Q9UL41 463 aa17.8■□□□□ 0.44
TRAPPC12-210ENST00000441983 SNX14Q9Y5W7 946 aa17.8■□□□□ 0.44
TRAPPC12-210ENST00000441983 TAF6LQ9Y6J9 622 aa17.8■□□□□ 0.44
TRAPPC12-210ENST00000441983 A0A0G2JMZ2 1700 aa17.79■□□□□ 0.44
TRAPPC12-210ENST00000441983 HOXA7P31268 230 aaPredicted RBP17.79■□□□□ 0.44
TRAPPC12-210ENST00000441983 CLIP2Q9UDT6 1046 aa17.79■□□□□ 0.44
TRAPPC12-210ENST00000441983 VCAM1P19320 739 aa17.78■□□□□ 0.44
TRAPPC12-210ENST00000441983 RCSD1Q6JBY9 416 aa17.78■□□□□ 0.44
TRAPPC12-210ENST00000441983 GADL1Q6ZQY3 521 aa17.78■□□□□ 0.44
TRAPPC12-210ENST00000441983 CLEC10AQ8IUN9 316 aa17.78■□□□□ 0.44
TRAPPC12-210ENST00000441983 TMTC2Q8N394 836 aa17.78■□□□□ 0.44
TRAPPC12-210ENST00000441983 ENAHQ8N8S7 591 aaPredicted RBP17.78■□□□□ 0.44
TRAPPC12-210ENST00000441983 IL27Q8NEV9 243 aa17.78■□□□□ 0.44
TRAPPC12-210ENST00000441983 GTF3C2Q8WUA4 911 aaPredicted RBP17.78■□□□□ 0.44
TRAPPC12-210ENST00000441983 ZIC5Q96T25 663 aa17.78■□□□□ 0.44
TRAPPC12-210ENST00000441983 PTPN18Q99952 460 aa17.78■□□□□ 0.44
TRAPPC12-210ENST00000441983 EMILIN3Q9NT22 766 aa17.78■□□□□ 0.44
TRAPPC12-210ENST00000441983 RLFQ13129 1914 aa17.78■□□□□ 0.44
TRAPPC12-210ENST00000441983 MYPNQ86TC9 1320 aa17.77■□□□□ 0.44
TRAPPC12-210ENST00000441983 BTBD19C9JJ37 291 aa17.77■□□□□ 0.44
TRAPPC12-210ENST00000441983 IGF2BP3O00425 579 aaKnown RBP eCLIP17.77■□□□□ 0.44
TRAPPC12-210ENST00000441983 NMT2O60551 498 aa17.77■□□□□ 0.44
TRAPPC12-210ENST00000441983 ATP2B2Q01814 1243 aa17.77■□□□□ 0.44
TRAPPC12-210ENST00000441983 SEC23AQ15436 765 aa17.77■□□□□ 0.44
TRAPPC12-210ENST00000441983 IFIT1BQ5T764 474 aaKnown RBP17.77■□□□□ 0.44
TRAPPC12-210ENST00000441983 GPAT2Q6NUI2 795 aa17.77■□□□□ 0.44
TRAPPC12-210ENST00000441983 CYB5R4Q7L1T6 521 aa17.77■□□□□ 0.44
TRAPPC12-210ENST00000441983 DHX32Q7L7V1 743 aaKnown RBP17.77■□□□□ 0.44
TRAPPC12-210ENST00000441983 FBXL16Q8N461 479 aa17.77■□□□□ 0.44
TRAPPC12-210ENST00000441983 GMCL1Q96IK5 515 aa17.77■□□□□ 0.44
TRAPPC12-210ENST00000441983 PARK7Q99497 189 aaKnown RBP17.77■□□□□ 0.44
TRAPPC12-210ENST00000441983 BEGAINQ9BUH8 593 aa17.77■□□□□ 0.44
TRAPPC12-210ENST00000441983 USP17L15C9J2P7 530 aa17.76■□□□□ 0.43
TRAPPC12-210ENST00000441983 USP17L13C9JLJ4 530 aa17.76■□□□□ 0.43
TRAPPC12-210ENST00000441983 USP17L11C9JVI0 530 aa17.76■□□□□ 0.43
TRAPPC12-210ENST00000441983 USP17L18D6R9N7 530 aa17.76■□□□□ 0.43
TRAPPC12-210ENST00000441983 USP17L22D6RA61 530 aa17.76■□□□□ 0.43
TRAPPC12-210ENST00000441983 USP17L17D6RBQ6 530 aa17.76■□□□□ 0.43
TRAPPC12-210ENST00000441983 USP17L19D6RCP7 530 aa17.76■□□□□ 0.43
TRAPPC12-210ENST00000441983 USP17L20D6RJB6 530 aa17.76■□□□□ 0.43
TRAPPC12-210ENST00000441983 F5H6K3 240 aa17.76■□□□□ 0.43
TRAPPC12-210ENST00000441983 PRC1O43663 620 aa17.76■□□□□ 0.43
TRAPPC12-210ENST00000441983 SEC24BO95487 1268 aa17.76■□□□□ 0.43
TRAPPC12-210ENST00000441983 OSBPP22059 807 aa17.76■□□□□ 0.43
TRAPPC12-210ENST00000441983 LIFRP42702 1097 aa17.76■□□□□ 0.43
TRAPPC12-210ENST00000441983 ANTXR2P58335 489 aa17.76■□□□□ 0.43
TRAPPC12-210ENST00000441983 KLRC3Q07444 240 aa17.76■□□□□ 0.43
TRAPPC12-210ENST00000441983 USP17L24Q0WX57 530 aa17.76■□□□□ 0.43
TRAPPC12-210ENST00000441983 ADCK5Q3MIX3 580 aa17.76■□□□□ 0.43
TRAPPC12-210ENST00000441983 NOM1Q5C9Z4 860 aaKnown RBP17.76■□□□□ 0.43
TRAPPC12-210ENST00000441983 BLOC1S2Q6QNY1 142 aa17.76■□□□□ 0.43
TRAPPC12-210ENST00000441983 TMEM47Q9BQJ4 181 aa17.76■□□□□ 0.43
TRAPPC12-210ENST00000441983 BACH2Q9BYV9 841 aa17.76■□□□□ 0.43
TRAPPC12-210ENST00000441983 KAT14Q9H8E8 782 aa17.76■□□□□ 0.43
TRAPPC12-210ENST00000441983 WBP1LQ9NX94 342 aa17.76■□□□□ 0.43
TRAPPC12-210ENST00000441983 PDHXO00330 501 aa17.75■□□□□ 0.43
TRAPPC12-210ENST00000441983 IFIT3O14879 490 aaKnown RBP17.75■□□□□ 0.43
TRAPPC12-210ENST00000441983 RBM25P49756 843 aaKnown RBP17.75■□□□□ 0.43
TRAPPC12-210ENST00000441983 EXOSC10Q01780 885 aaKnown RBP17.75■□□□□ 0.43
TRAPPC12-210ENST00000441983 WTAPQ15007 396 aa17.75■□□□□ 0.43
TRAPPC12-210ENST00000441983 TREML2Q5T2D2 321 aa17.75■□□□□ 0.43
TRAPPC12-210ENST00000441983 LRRC47Q8N1G4 583 aaKnown RBP17.75■□□□□ 0.43
TRAPPC12-210ENST00000441983 FAM43AQ8N2R8 423 aa17.75■□□□□ 0.43
TRAPPC12-210ENST00000441983 NKX2-3Q8TAU0 364 aa17.75■□□□□ 0.43
TRAPPC12-210ENST00000441983 DCAF4Q8WV16 495 aa17.75■□□□□ 0.43
TRAPPC12-210ENST00000441983 JAKMIP1Q96N16 626 aaKnown RBP17.75■□□□□ 0.43
TRAPPC12-210ENST00000441983 ZKSCAN3Q9BRR0 538 aa17.75■□□□□ 0.43
TRAPPC12-210ENST00000441983 SH2B2O14492 632 aaPredicted RBP17.74■□□□□ 0.43
TRAPPC12-210ENST00000441983 PLA2G6O60733 806 aa17.74■□□□□ 0.43
TRAPPC12-210ENST00000441983 NDUFB10O96000 172 aa17.74■□□□□ 0.43
TRAPPC12-210ENST00000441983 SNHG28P0DPA3 235 aa17.74■□□□□ 0.43
TRAPPC12-210ENST00000441983 ZYXQ15942 572 aaKnown RBP17.74■□□□□ 0.43
TRAPPC12-210ENST00000441983 TMEM67Q5HYA8 995 aa17.74■□□□□ 0.43
TRAPPC12-210ENST00000441983 LBX2Q6XYB7 198 aa17.74■□□□□ 0.43
TRAPPC12-210ENST00000441983 CATSPERGQ6ZRH7 1159 aa17.74■□□□□ 0.43
TRAPPC12-210ENST00000441983 SGMS1Q86VZ5 419 aa17.74■□□□□ 0.43
TRAPPC12-210ENST00000441983 PNMA1Q8ND90 353 aa17.74■□□□□ 0.43
TRAPPC12-210ENST00000441983 IGDCC4Q8TDY8 1250 aa17.74■□□□□ 0.43
TRAPPC12-210ENST00000441983 ZFYVE28Q9HCC9 887 aa17.74■□□□□ 0.43
TRAPPC12-210ENST00000441983 ZSWIM6Q9HCJ5 1215 aa17.74■□□□□ 0.43
TRAPPC12-210ENST00000441983 CASTP20810 708 aaKnown RBP17.73■□□□□ 0.43
TRAPPC12-210ENST00000441983 RPS6KB1P23443 525 aa17.73■□□□□ 0.43
TRAPPC12-210ENST00000441983 RCAN1P53805 252 aa17.73■□□□□ 0.43
TRAPPC12-210ENST00000441983 IRX3P78415 501 aaPredicted RBP17.73■□□□□ 0.43
TRAPPC12-210ENST00000441983 TAF1CQ15572 869 aaPredicted RBP17.73■□□□□ 0.43
TRAPPC12-210ENST00000441983 GPATCH4Q5T3I0 446 aaKnown RBP17.73■□□□□ 0.43
TRAPPC12-210ENST00000441983 SLFN13Q68D06 897 aa17.73■□□□□ 0.43
TRAPPC12-210ENST00000441983 RUFY3Q7L099 469 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms