RNA–Protein interactions for RNA: ENST00000441778.6

LDB2-202, Transcript of LIM domain binding 2, humanhuman

TSL 1 (best) BASIC

Gene LDB2, Length 2,476 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2-202ENST00000441778 C1orf167Q5SNV9 1468 aa10.14□□□□□ -0.79
LDB2-202ENST00000441778 TRIM75PA6NK02 468 aa10.13□□□□□ -0.79
LDB2-202ENST00000441778 PATL2C9JE40 543 aaKnown RBP10.13□□□□□ -0.79
LDB2-202ENST00000441778 N4BP3O15049 544 aa10.13□□□□□ -0.79
LDB2-202ENST00000441778 MBD4O95243 580 aa10.13□□□□□ -0.79
LDB2-202ENST00000441778 PCCAP05165 728 aaPredicted RBP10.13□□□□□ -0.79
LDB2-202ENST00000441778 COPB1P53618 953 aaKnown RBP10.13□□□□□ -0.79
LDB2-202ENST00000441778 USP14P54578 494 aa10.13□□□□□ -0.79
LDB2-202ENST00000441778 CORO7P57737 925 aa10.13□□□□□ -0.79
LDB2-202ENST00000441778 AKAP17AQ02040 695 aaKnown RBP10.13□□□□□ -0.79
LDB2-202ENST00000441778 WTAPQ15007 396 aa10.13□□□□□ -0.79
LDB2-202ENST00000441778 NOM1Q5C9Z4 860 aaKnown RBP10.13□□□□□ -0.79
LDB2-202ENST00000441778 LDHAL6AQ6ZMR3 332 aa10.13□□□□□ -0.79
LDB2-202ENST00000441778 CABLES1Q8TDN4 633 aa10.13□□□□□ -0.79
LDB2-202ENST00000441778 GREM2Q9H772 168 aa10.13□□□□□ -0.79
LDB2-202ENST00000441778 ARMT1Q9H993 441 aa10.13□□□□□ -0.79
LDB2-202ENST00000441778 HPCAL4Q9UM19 191 aa10.13□□□□□ -0.79
LDB2-202ENST00000441778 TFR2Q9UP52 801 aa10.13□□□□□ -0.79
LDB2-202ENST00000441778 ZNF330Q9Y3S2 320 aaPredicted RBP10.13□□□□□ -0.79
LDB2-202ENST00000441778 XDHP47989 1333 aa10.13□□□□□ -0.79
LDB2-202ENST00000441778 ENC1O14682 589 aa10.13□□□□□ -0.79
LDB2-202ENST00000441778 PRKAB2O43741 272 aa10.13□□□□□ -0.79
LDB2-202ENST00000441778 TUBBP07437 444 aa10.13□□□□□ -0.79
LDB2-202ENST00000441778 ITGA6P23229 1130 aa10.13□□□□□ -0.79
LDB2-202ENST00000441778 ARID4AP29374 1257 aaPredicted RBP10.13□□□□□ -0.79
LDB2-202ENST00000441778 TTC31Q49AM3 519 aaPredicted RBP10.13□□□□□ -0.79
LDB2-202ENST00000441778 GOLGA6L1Q8N7Z2 621 aa10.13□□□□□ -0.79
LDB2-202ENST00000441778 CCDC148Q8NFR7 591 aa10.13□□□□□ -0.79
LDB2-202ENST00000441778 AFAP1L1Q8TED9 768 aa10.13□□□□□ -0.79
LDB2-202ENST00000441778 RIN2Q8WYP3 895 aaPredicted RBP10.13□□□□□ -0.79
LDB2-202ENST00000441778 DDX17Q92841 729 aaKnown RBP10.13□□□□□ -0.79
LDB2-202ENST00000441778 MMS19Q96T76 1030 aa10.13□□□□□ -0.79
LDB2-202ENST00000441778 BLZF1Q9H2G9 400 aa10.13□□□□□ -0.79
LDB2-202ENST00000441778 ACBD3Q9H3P7 528 aa10.13□□□□□ -0.79
LDB2-202ENST00000441778 VIPAS39Q9H9C1 493 aa10.13□□□□□ -0.79
LDB2-202ENST00000441778 VPS54Q9P1Q0 977 aa10.13□□□□□ -0.79
LDB2-202ENST00000441778 GUCA1BQ9UMX6 200 aa10.13□□□□□ -0.79
LDB2-202ENST00000441778 GSG1L2A8MUP6 293 aa10.12□□□□□ -0.79
LDB2-202ENST00000441778 KRT9P35527 623 aa10.12□□□□□ -0.79
LDB2-202ENST00000441778 MFSD6Q6ZSS7 791 aa10.12□□□□□ -0.79
LDB2-202ENST00000441778 ZNF654Q8IZM8 581 aa10.12□□□□□ -0.79
LDB2-202ENST00000441778 NUP133Q8WUM0 1156 aa10.12□□□□□ -0.79
LDB2-202ENST00000441778 KRT23Q9C075 422 aa10.12□□□□□ -0.79
LDB2-202ENST00000441778 CNNM2Q9H8M5 875 aa10.12□□□□□ -0.79
LDB2-202ENST00000441778 TNS3Q68CZ2 1445 aa10.12□□□□□ -0.79
LDB2-202ENST00000441778 ZNF142P52746 1687 aaPredicted RBP10.12□□□□□ -0.79
LDB2-202ENST00000441778 LRRC10BA6NIK2 292 aa10.12□□□□□ -0.79
LDB2-202ENST00000441778 PSMD14O00487 310 aa10.12□□□□□ -0.79
LDB2-202ENST00000441778 SRGAP2O75044 1071 aa10.12□□□□□ -0.79
LDB2-202ENST00000441778 PPFIA4O75335 1185 aa10.12□□□□□ -0.79
LDB2-202ENST00000441778 NDUFA10O95299 355 aa10.12□□□□□ -0.79
LDB2-202ENST00000441778 ATP1A1P05023 1023 aaKnown RBP10.12□□□□□ -0.79
LDB2-202ENST00000441778 HERVK_113P62684 666 aa10.12□□□□□ -0.79
LDB2-202ENST00000441778 ICE2Q659A1 982 aa10.12□□□□□ -0.79
LDB2-202ENST00000441778 CTR9Q6PD62 1173 aa10.12□□□□□ -0.79
LDB2-202ENST00000441778 GSPT2Q8IYD1 628 aaKnown RBP10.12□□□□□ -0.79
LDB2-202ENST00000441778 MAGEB6Q8N7X4 407 aa10.12□□□□□ -0.79
LDB2-202ENST00000441778 ZBTB38Q8NAP3 1195 aaPredicted RBP10.12□□□□□ -0.79
LDB2-202ENST00000441778 FANCBQ8NB91 859 aa10.12□□□□□ -0.79
LDB2-202ENST00000441778 GDAP1L1Q96MZ0 367 aa10.12□□□□□ -0.79
LDB2-202ENST00000441778 CNNM1Q9NRU3 951 aa10.12□□□□□ -0.79
LDB2-202ENST00000441778 TOMM22Q9NS69 142 aa10.12□□□□□ -0.79
LDB2-202ENST00000441778 EPN1Q9Y6I3 576 aaPredicted RBP10.12□□□□□ -0.79
LDB2-202ENST00000441778 TNS2Q63HR2 1409 aa10.11□□□□□ -0.79
LDB2-202ENST00000441778 SPATA31A3Q5VYP0 1347 aa10.11□□□□□ -0.79
LDB2-202ENST00000441778 CDHR2Q9BYE9 1310 aa10.11□□□□□ -0.79
LDB2-202ENST00000441778 hCG_1642624A0A1W2PR95 340 aa10.11□□□□□ -0.79
LDB2-202ENST00000441778 PRDM1O75626 825 aa10.11□□□□□ -0.79
LDB2-202ENST00000441778 MYBL2P10244 700 aa10.11□□□□□ -0.79
LDB2-202ENST00000441778 PKN1Q16512 942 aa10.11□□□□□ -0.79
LDB2-202ENST00000441778 TCP11X2Q5H9J9 407 aa10.11□□□□□ -0.79
LDB2-202ENST00000441778 RRAGBQ5VZM2 374 aa10.11□□□□□ -0.79
LDB2-202ENST00000441778 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.11□□□□□ -0.79
LDB2-202ENST00000441778 STAG1Q8WVM7 1258 aa10.11□□□□□ -0.79
LDB2-202ENST00000441778 MTRQ99707 1265 aa10.11□□□□□ -0.79
LDB2-202ENST00000441778 SHANK3Q9BYB0 1731 aa10.11□□□□□ -0.79
LDB2-202ENST00000441778 PLCH1Q4KWH8 1693 aa10.11□□□□□ -0.79
LDB2-202ENST00000441778 KCNJ18B7U540 433 aa10.11□□□□□ -0.79
LDB2-202ENST00000441778 ZMYND10O75800 440 aa10.11□□□□□ -0.79
LDB2-202ENST00000441778 TRIM28Q13263 835 aaKnown RBP10.11□□□□□ -0.79
LDB2-202ENST00000441778 TRIM14Q14142 442 aa10.11□□□□□ -0.79
LDB2-202ENST00000441778 KCNJ12Q14500 433 aa10.11□□□□□ -0.79
LDB2-202ENST00000441778 ZNF174Q15697 407 aa10.11□□□□□ -0.79
LDB2-202ENST00000441778 E2F4Q16254 413 aa10.11□□□□□ -0.79
LDB2-202ENST00000441778 CTCFLQ8NI51 663 aaPredicted RBP10.11□□□□□ -0.79
LDB2-202ENST00000441778 PHF20Q9BVI0 1012 aa10.11□□□□□ -0.79
LDB2-202ENST00000441778 RWDD2AQ9UIY3 292 aa10.11□□□□□ -0.79
LDB2-202ENST00000441778 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.11□□□□□ -0.79
LDB2-202ENST00000441778 TTC26A0AVF1 554 aa10.1□□□□□ -0.79
LDB2-202ENST00000441778 PDE8BO95263 885 aa10.1□□□□□ -0.79
LDB2-202ENST00000441778 KRT2P35908 639 aa10.1□□□□□ -0.79
LDB2-202ENST00000441778 PAK1Q13153 545 aa10.1□□□□□ -0.79
LDB2-202ENST00000441778 SART3Q15020 963 aaKnown RBP10.1□□□□□ -0.79
LDB2-202ENST00000441778 PDXDC2PQ6P474 469 aa10.1□□□□□ -0.79
LDB2-202ENST00000441778 LCORLQ8N3X6 602 aa10.1□□□□□ -0.79
LDB2-202ENST00000441778 COG1Q8WTW3 980 aa10.1□□□□□ -0.79
LDB2-202ENST00000441778 NELFBQ8WX92 580 aa10.1□□□□□ -0.79
LDB2-202ENST00000441778 PPM1EQ8WY54 764 aa10.1□□□□□ -0.79
LDB2-202ENST00000441778 FERMT2Q96AC1 680 aa10.1□□□□□ -0.79
LDB2-202ENST00000441778 CAPZA3Q96KX2 299 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms