RNA–Protein interactions for RNA: ENST00000441439.6

LMO3-208, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO3, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-208ENST00000441439 CRACR2AQ9BSW2 395 aa8.86□□□□□ -0.99
LMO3-208ENST00000441439 PPP1R12AO14974 1030 aaPredicted RBP8.85□□□□□ -0.99
LMO3-208ENST00000441439 FOSBP53539 338 aa8.85□□□□□ -0.99
LMO3-208ENST00000441439 ACTN3Q08043 901 aaPredicted RBP8.85□□□□□ -0.99
LMO3-208ENST00000441439 DPYDQ12882 1025 aa8.85□□□□□ -0.99
LMO3-208ENST00000441439 DDX46Q7L014 1031 aaKnown RBP8.85□□□□□ -0.99
LMO3-208ENST00000441439 NOSTRINQ8IVI9 506 aa8.85□□□□□ -0.99
LMO3-208ENST00000441439 ZKSCAN4Q969J2 545 aaPredicted RBP8.85□□□□□ -0.99
LMO3-208ENST00000441439 ZSWIM4Q9H7M6 989 aa8.85□□□□□ -0.99
LMO3-208ENST00000441439 ACTR5Q9H9F9 607 aaPredicted RBP8.85□□□□□ -0.99
LMO3-208ENST00000441439 ANGEL1Q9UNK9 670 aaKnown RBP8.85□□□□□ -0.99
LMO3-208ENST00000441439 CEP131Q9UPN4 1083 aa8.85□□□□□ -0.99
LMO3-208ENST00000441439 DOT1LQ8TEK3 1739 aa8.85□□□□□ -0.99
LMO3-208ENST00000441439 NDUFA10O95299 355 aa8.85□□□□□ -0.99
LMO3-208ENST00000441439 BRD2P25440 801 aaKnown RBP8.85□□□□□ -0.99
LMO3-208ENST00000441439 LIG3P49916 1009 aa8.85□□□□□ -0.99
LMO3-208ENST00000441439 TOB1P50616 345 aaPredicted RBP8.85□□□□□ -0.99
LMO3-208ENST00000441439 MNAT1P51948 309 aa8.85□□□□□ -0.99
LMO3-208ENST00000441439 CRYMQ14894 314 aa8.85□□□□□ -0.99
LMO3-208ENST00000441439 GLE1Q53GS7 698 aaKnown RBP8.85□□□□□ -0.99
LMO3-208ENST00000441439 BCAS4Q8TDM0 211 aa8.85□□□□□ -0.99
LMO3-208ENST00000441439 P3H4Q92791 437 aa8.85□□□□□ -0.99
LMO3-208ENST00000441439 MIEF2Q96C03 454 aa8.85□□□□□ -0.99
LMO3-208ENST00000441439 MMS19Q96T76 1030 aa8.85□□□□□ -0.99
LMO3-208ENST00000441439 ESF1Q9H501 851 aaKnown RBP8.85□□□□□ -0.99
LMO3-208ENST00000441439 RWDD2AQ9UIY3 292 aa8.85□□□□□ -0.99
LMO3-208ENST00000441439 A0A0G2JLW4 131 aa8.85□□□□□ -0.99
LMO3-208ENST00000441439 CPLX1O14810 134 aa8.85□□□□□ -0.99
LMO3-208ENST00000441439 FOXN1O15353 648 aa8.85□□□□□ -0.99
LMO3-208ENST00000441439 FMNL1O95466 1100 aaPredicted RBP8.85□□□□□ -0.99
LMO3-208ENST00000441439 ELF1P32519 619 aa8.85□□□□□ -0.99
LMO3-208ENST00000441439 LIFRP42702 1097 aa8.85□□□□□ -0.99
LMO3-208ENST00000441439 EPHB4P54760 987 aa8.85□□□□□ -0.99
LMO3-208ENST00000441439 NKX1-1Q15270 411 aaPredicted RBP8.85□□□□□ -0.99
LMO3-208ENST00000441439 NCAPH2Q6IBW4 605 aa8.85□□□□□ -0.99
LMO3-208ENST00000441439 ANKRD18AQ8IVF6 992 aa8.85□□□□□ -0.99
LMO3-208ENST00000441439 ACRBPQ8NEB7 543 aa8.85□□□□□ -0.99
LMO3-208ENST00000441439 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.85□□□□□ -0.99
LMO3-208ENST00000441439 IQCDQ96DY2 449 aa8.85□□□□□ -0.99
LMO3-208ENST00000441439 STRN4Q9NRL3 753 aa8.85□□□□□ -0.99
LMO3-208ENST00000441439 SERTAD1Q9UHV2 236 aa8.85□□□□□ -0.99
LMO3-208ENST00000441439 NUP98P52948 1817 aa8.84□□□□□ -0.99
LMO3-208ENST00000441439 SOS2Q07890 1332 aaPredicted RBP8.84□□□□□ -0.99
LMO3-208ENST00000441439 MMP1P03956 469 aa8.84□□□□□ -0.99
LMO3-208ENST00000441439 GCFC2P16383 781 aaKnown RBP8.84□□□□□ -0.99
LMO3-208ENST00000441439 IL15P40933 162 aaPredicted RBP8.84□□□□□ -0.99
LMO3-208ENST00000441439 NAP1L1P55209 391 aaKnown RBP8.84□□□□□ -0.99
LMO3-208ENST00000441439 CPLX2Q6PUV4 134 aaKnown RBP8.84□□□□□ -0.99
LMO3-208ENST00000441439 CCDC170Q8IYT3 715 aa8.84□□□□□ -0.99
LMO3-208ENST00000441439 CCDC155Q8N6L0 562 aa8.84□□□□□ -0.99
LMO3-208ENST00000441439 GPATCH11Q8N954 259 aa8.84□□□□□ -0.99
LMO3-208ENST00000441439 PYM1Q9BRP8 204 aaKnown RBP8.84□□□□□ -0.99
LMO3-208ENST00000441439 EPN3Q9H201 632 aa8.84□□□□□ -0.99
LMO3-208ENST00000441439 DNAJC5Q9H3Z4 198 aa8.84□□□□□ -0.99
LMO3-208ENST00000441439 EPN1Q9Y6I3 576 aaPredicted RBP8.84□□□□□ -0.99
LMO3-208ENST00000441439 ATAD5Q96QE3 1844 aa8.84□□□□□ -0.99
LMO3-208ENST00000441439 UBN2Q6ZU65 1347 aa8.84□□□□□ -0.99
LMO3-208ENST00000441439 ANXA1P04083 346 aa8.84□□□□□ -0.99
LMO3-208ENST00000441439 CHGBP05060 677 aa8.84□□□□□ -0.99
LMO3-208ENST00000441439 KRT83P78385 493 aa8.84□□□□□ -0.99
LMO3-208ENST00000441439 FBXW10Q5XX13 1052 aa8.84□□□□□ -0.99
LMO3-208ENST00000441439 TLDC1Q6P9B6 456 aa8.84□□□□□ -0.99
LMO3-208ENST00000441439 ZNF512BQ96KM6 892 aaPredicted RBP8.84□□□□□ -0.99
LMO3-208ENST00000441439 FAM217BQ9NTX9 383 aaPredicted RBP8.84□□□□□ -0.99
LMO3-208ENST00000441439 PHACTR2O75167 634 aa8.84□□□□□ -0.99
LMO3-208ENST00000441439 HERVK_113P62684 666 aa8.84□□□□□ -0.99
LMO3-208ENST00000441439 GNGT1P63211 74 aa8.84□□□□□ -0.99
LMO3-208ENST00000441439 OSBP2Q969R2 916 aa8.84□□□□□ -0.99
LMO3-208ENST00000441439 CAPN11Q9UMQ6 739 aa8.84□□□□□ -0.99
LMO3-208ENST00000441439 BMP15O95972 392 aa8.83□□□□□ -1
LMO3-208ENST00000441439 ABL1P00519 1130 aa8.83□□□□□ -1
LMO3-208ENST00000441439 CD44P16070 742 aaKnown RBP8.83□□□□□ -1
LMO3-208ENST00000441439 IFNAR1P17181 557 aa8.83□□□□□ -1
LMO3-208ENST00000441439 FOXO4P98177 505 aa8.83□□□□□ -1
LMO3-208ENST00000441439 ALX1Q15699 326 aa8.83□□□□□ -1
LMO3-208ENST00000441439 LACTB2Q53H82 288 aaPredicted RBP8.83□□□□□ -1
LMO3-208ENST00000441439 APOA5Q6Q788 366 aa8.83□□□□□ -1
LMO3-208ENST00000441439 RETREG2Q8NC44 543 aa8.83□□□□□ -1
LMO3-208ENST00000441439 KLHDC4Q8TBB5 520 aa8.83□□□□□ -1
LMO3-208ENST00000441439 APPBP2Q92624 585 aa8.83□□□□□ -1
LMO3-208ENST00000441439 TSGA10Q9BZW7 698 aa8.83□□□□□ -1
LMO3-208ENST00000441439 NHSQ6T4R5 1651 aa8.83□□□□□ -1
LMO3-208ENST00000441439 H7C1W4 665 aa8.83□□□□□ -1
LMO3-208ENST00000441439 LCA5LO95447 670 aa8.83□□□□□ -1
LMO3-208ENST00000441439 FGAP02671 866 aa8.83□□□□□ -1
LMO3-208ENST00000441439 MYBL2P10244 700 aa8.83□□□□□ -1
LMO3-208ENST00000441439 METAP2P50579 478 aaKnown RBP eCLIP8.83□□□□□ -1
LMO3-208ENST00000441439 FIGNQ5HY92 759 aa8.83□□□□□ -1
LMO3-208ENST00000441439 FAXDC2Q96IV6 333 aa8.83□□□□□ -1
LMO3-208ENST00000441439 BCCIPQ9P287 314 aaKnown RBP eCLIP8.83□□□□□ -1
LMO3-208ENST00000441439 TAF1LQ8IZX4 1826 aa8.83□□□□□ -1
LMO3-208ENST00000441439 MAST2Q6P0Q8 1798 aa8.83□□□□□ -1
LMO3-208ENST00000441439 POLR2DO15514 142 aaKnown RBP8.83□□□□□ -1
LMO3-208ENST00000441439 RANBP6O60518 1105 aaKnown RBP8.83□□□□□ -1
LMO3-208ENST00000441439 RTN2O75298 545 aa8.83□□□□□ -1
LMO3-208ENST00000441439 ATP1A1P05023 1023 aaKnown RBP8.83□□□□□ -1
LMO3-208ENST00000441439 COPB1P53618 953 aaKnown RBP8.83□□□□□ -1
LMO3-208ENST00000441439 NLRP6P59044 892 aa8.83□□□□□ -1
LMO3-208ENST00000441439 IFFO1Q0D2I5 559 aa8.83□□□□□ -1
LMO3-208ENST00000441439 KRT31Q15323 416 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms