RNA–Protein interactions for RNA: ENST00000440472.6

SPIRE1-204, Transcript of spire type actin nucleation factor 1, humanhuman

TSL 1 (best)

Gene SPIRE1, Length 2,109 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-204ENST00000440472 MAN1B1Q9UKM7 699 aa9.38□□□□□ -0.91
SPIRE1-204ENST00000440472 AFF2P51816 1311 aa9.38□□□□□ -0.91
SPIRE1-204ENST00000440472 PLIN4Q96Q06 1357 aa9.37□□□□□ -0.91
SPIRE1-204ENST00000440472 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.37□□□□□ -0.91
SPIRE1-204ENST00000440472 PSDA5PKW4 1024 aaPredicted RBP9.37□□□□□ -0.91
SPIRE1-204ENST00000440472 SMIM22K7EJ46 135 aa9.37□□□□□ -0.91
SPIRE1-204ENST00000440472 NRDCO43847 1150 aa9.37□□□□□ -0.91
SPIRE1-204ENST00000440472 GPSM2P81274 684 aa9.37□□□□□ -0.91
SPIRE1-204ENST00000440472 LRMPQ12912 555 aa9.37□□□□□ -0.91
SPIRE1-204ENST00000440472 TTC38Q5R3I4 469 aa9.37□□□□□ -0.91
SPIRE1-204ENST00000440472 C16orf86Q6ZW13 317 aa9.37□□□□□ -0.91
SPIRE1-204ENST00000440472 CCDC112Q8NEF3 446 aa9.37□□□□□ -0.91
SPIRE1-204ENST00000440472 SMARCE1Q969G3 411 aa9.37□□□□□ -0.91
SPIRE1-204ENST00000440472 XPO4Q9C0E2 1151 aaKnown RBP9.37□□□□□ -0.91
SPIRE1-204ENST00000440472 KAT14Q9H8E8 782 aa9.37□□□□□ -0.91
SPIRE1-204ENST00000440472 VPS54Q9P1Q0 977 aa9.37□□□□□ -0.91
SPIRE1-204ENST00000440472 M0R2N6 131 aa9.37□□□□□ -0.91
SPIRE1-204ENST00000440472 POLR2DO15514 142 aaKnown RBP9.37□□□□□ -0.91
SPIRE1-204ENST00000440472 CCP110O43303 1012 aa9.37□□□□□ -0.91
SPIRE1-204ENST00000440472 CTIFO43310 598 aaKnown RBP9.37□□□□□ -0.91
SPIRE1-204ENST00000440472 PRDM1O75626 825 aa9.37□□□□□ -0.91
SPIRE1-204ENST00000440472 SERPINB2P05120 415 aa9.37□□□□□ -0.91
SPIRE1-204ENST00000440472 ZNF18P17022 549 aa9.37□□□□□ -0.91
SPIRE1-204ENST00000440472 USP5P45974 858 aa9.37□□□□□ -0.91
SPIRE1-204ENST00000440472 TFAP4Q01664 338 aa9.37□□□□□ -0.91
SPIRE1-204ENST00000440472 ORC2Q13416 577 aaPredicted RBP9.37□□□□□ -0.91
SPIRE1-204ENST00000440472 NYAP1Q6ZVC0 841 aa9.37□□□□□ -0.91
SPIRE1-204ENST00000440472 SMIM5Q71RC9 77 aa9.37□□□□□ -0.91
SPIRE1-204ENST00000440472 SP8Q8IXZ3 490 aa9.37□□□□□ -0.91
SPIRE1-204ENST00000440472 MPNDQ8N594 471 aa9.37□□□□□ -0.91
SPIRE1-204ENST00000440472 NEDD1Q8NHV4 660 aa9.37□□□□□ -0.91
SPIRE1-204ENST00000440472 ERCC4Q92889 916 aaPredicted RBP9.37□□□□□ -0.91
SPIRE1-204ENST00000440472 GSDMAQ96QA5 445 aa9.37□□□□□ -0.91
SPIRE1-204ENST00000440472 SPZ1Q9BXG8 430 aa9.37□□□□□ -0.91
SPIRE1-204ENST00000440472 CSRNP2Q9H175 543 aa9.37□□□□□ -0.91
SPIRE1-204ENST00000440472 PDCL3Q9H2J4 239 aa9.37□□□□□ -0.91
SPIRE1-204ENST00000440472 IL17RBQ9NRM6 502 aa9.37□□□□□ -0.91
SPIRE1-204ENST00000440472 IFNKQ9P0W0 207 aa9.37□□□□□ -0.91
SPIRE1-204ENST00000440472 SERTAD1Q9UHV2 236 aa9.37□□□□□ -0.91
SPIRE1-204ENST00000440472 MYO3BQ8WXR4 1341 aa9.36□□□□□ -0.91
SPIRE1-204ENST00000440472 PALM3A6NDB9 673 aaPredicted RBP9.36□□□□□ -0.91
SPIRE1-204ENST00000440472 LAD1O00515 517 aa9.36□□□□□ -0.91
SPIRE1-204ENST00000440472 USP17L8P0C7I0 530 aa9.36□□□□□ -0.91
SPIRE1-204ENST00000440472 CYP2D6P10635 497 aa9.36□□□□□ -0.91
SPIRE1-204ENST00000440472 SKILP12757 684 aa9.36□□□□□ -0.91
SPIRE1-204ENST00000440472 BMP6P22004 513 aa9.36□□□□□ -0.91
SPIRE1-204ENST00000440472 FCHSD1Q86WN1 690 aa9.36□□□□□ -0.91
SPIRE1-204ENST00000440472 CMTR1Q8N1G2 835 aaKnown RBP9.36□□□□□ -0.91
SPIRE1-204ENST00000440472 PNMA1Q8ND90 353 aa9.36□□□□□ -0.91
SPIRE1-204ENST00000440472 CCDC148Q8NFR7 591 aa9.36□□□□□ -0.91
SPIRE1-204ENST00000440472 SH3RF3Q8TEJ3 882 aaPredicted RBP9.36□□□□□ -0.91
SPIRE1-204ENST00000440472 TMX1Q9H3N1 280 aa9.36□□□□□ -0.91
SPIRE1-204ENST00000440472 PCDHA4Q9UN74 947 aa9.36□□□□□ -0.91
SPIRE1-204ENST00000440472 hCG_1984214I3L0E3 225 aa9.35□□□□□ -0.91
SPIRE1-204ENST00000440472 BIN1O00499 593 aa9.35□□□□□ -0.91
SPIRE1-204ENST00000440472 NPHP1O15259 732 aa9.35□□□□□ -0.91
SPIRE1-204ENST00000440472 LONP1P36776 959 aaKnown RBP9.35□□□□□ -0.91
SPIRE1-204ENST00000440472 PLCD1P51178 756 aa9.35□□□□□ -0.91
SPIRE1-204ENST00000440472 GRIN1Q05586 938 aa9.35□□□□□ -0.91
SPIRE1-204ENST00000440472 VSTM4Q8IW00 320 aa9.35□□□□□ -0.91
SPIRE1-204ENST00000440472 ZNF444Q8N0Y2 327 aaPredicted RBP9.35□□□□□ -0.91
SPIRE1-204ENST00000440472 C17orf53Q8N3J3 647 aaPredicted RBP9.35□□□□□ -0.91
SPIRE1-204ENST00000440472 CCDC82Q8N4S0 544 aa9.35□□□□□ -0.91
SPIRE1-204ENST00000440472 ZNF713Q8N859 430 aaPredicted RBP9.35□□□□□ -0.91
SPIRE1-204ENST00000440472 C4orf32Q8N8J7 132 aa9.35□□□□□ -0.91
SPIRE1-204ENST00000440472 MAD2L2Q9UI95 211 aa9.35□□□□□ -0.91
SPIRE1-204ENST00000440472 A0A087WWV3 80 aa9.35□□□□□ -0.91
SPIRE1-204ENST00000440472 POLRMTO00411 1230 aaKnown RBP9.35□□□□□ -0.91
SPIRE1-204ENST00000440472 MYL1P05976 194 aa9.35□□□□□ -0.91
SPIRE1-204ENST00000440472 RASA1P20936 1047 aa9.35□□□□□ -0.91
SPIRE1-204ENST00000440472 PRPHP41219 470 aa9.35□□□□□ -0.91
SPIRE1-204ENST00000440472 UBASH3AP57075 661 aa9.35□□□□□ -0.91
SPIRE1-204ENST00000440472 RHBDL3P58872 404 aa9.35□□□□□ -0.91
SPIRE1-204ENST00000440472 NLRP5P59047 1200 aa9.35□□□□□ -0.91
SPIRE1-204ENST00000440472 EARS2Q5JPH6 523 aaKnown RBP9.35□□□□□ -0.91
SPIRE1-204ENST00000440472 FAM47AQ5JRC9 791 aa9.35□□□□□ -0.91
SPIRE1-204ENST00000440472 MEX3CQ5U5Q3 659 aaKnown RBP9.35□□□□□ -0.91
SPIRE1-204ENST00000440472 BLIDQ8IZY5 108 aa9.35□□□□□ -0.91
SPIRE1-204ENST00000440472 CCAR2Q8N163 923 aaKnown RBP9.35□□□□□ -0.91
SPIRE1-204ENST00000440472 TBC1D16Q8TBP0 767 aa9.35□□□□□ -0.91
SPIRE1-204ENST00000440472 MKNK2Q9HBH9 465 aa9.35□□□□□ -0.91
SPIRE1-204ENST00000440472 SNED1Q8TER0 1413 aa9.35□□□□□ -0.91
SPIRE1-204ENST00000440472 UFL1O94874 794 aa9.34□□□□□ -0.91
SPIRE1-204ENST00000440472 SFPQP23246 707 aaKnown RBP eCLIP9.34□□□□□ -0.91
SPIRE1-204ENST00000440472 DPYDQ12882 1025 aa9.34□□□□□ -0.91
SPIRE1-204ENST00000440472 TBX2Q13207 712 aaPredicted RBP9.34□□□□□ -0.91
SPIRE1-204ENST00000440472 E2F4Q16254 413 aa9.34□□□□□ -0.91
SPIRE1-204ENST00000440472 ZNF772Q68DY9 489 aaPredicted RBP9.34□□□□□ -0.91
SPIRE1-204ENST00000440472 IQUBQ8NA54 791 aa9.34□□□□□ -0.91
SPIRE1-204ENST00000440472 CCDC12Q8WUD4 166 aaPredicted RBP9.34□□□□□ -0.91
SPIRE1-204ENST00000440472 PAGE5Q96GU1 130 aa9.34□□□□□ -0.91
SPIRE1-204ENST00000440472 GTPBP4Q9BZE4 634 aaKnown RBP9.34□□□□□ -0.91
SPIRE1-204ENST00000440472 COA1Q9GZY4 146 aa9.34□□□□□ -0.91
SPIRE1-204ENST00000440472 BARHL2Q9NY43 387 aa9.34□□□□□ -0.91
SPIRE1-204ENST00000440472 ESYT2A0FGR8 921 aa9.34□□□□□ -0.91
SPIRE1-204ENST00000440472 NMT2O60551 498 aa9.34□□□□□ -0.91
SPIRE1-204ENST00000440472 TSPY3P0CV98 308 aa9.34□□□□□ -0.91
SPIRE1-204ENST00000440472 TSPY8P0CW00 308 aa9.34□□□□□ -0.91
SPIRE1-204ENST00000440472 TNNT1P13805 278 aa9.34□□□□□ -0.91
SPIRE1-204ENST00000440472 HOXA7P31268 230 aaPredicted RBP9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms