RNA–Protein interactions for RNA: ENST00000439986.8

CCBE1-202, Transcript of collagen and calcium binding EGF domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCBE1, Length 6,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-202ENST00000439986 VPS16Q9H269 839 aa12.83□□□□□ -0.36
CCBE1-202ENST00000439986 GABBR1Q9UBS5 961 aa12.83□□□□□ -0.36
CCBE1-202ENST00000439986 NEK11Q8NG66 645 aa12.82□□□□□ -0.36
CCBE1-202ENST00000439986 TFCP2L1Q9NZI6 479 aa12.82□□□□□ -0.36
CCBE1-202ENST00000439986 PCDHA7Q9UN72 937 aa12.82□□□□□ -0.36
CCBE1-202ENST00000439986 ABCA8O94911 1581 aa12.82□□□□□ -0.36
CCBE1-202ENST00000439986 PFKFB2O60825 505 aa12.82□□□□□ -0.36
CCBE1-202ENST00000439986 IRX1P78414 480 aaPredicted RBP12.82□□□□□ -0.36
CCBE1-202ENST00000439986 DZIP3Q86Y13 1208 aaKnown RBP12.82□□□□□ -0.36
CCBE1-202ENST00000439986 TRMT44Q8IYL2 757 aaKnown RBP12.82□□□□□ -0.36
CCBE1-202ENST00000439986 PHKBQ93100 1093 aa12.82□□□□□ -0.36
CCBE1-202ENST00000439986 PFDN1O60925 122 aa12.82□□□□□ -0.36
CCBE1-202ENST00000439986 PAX3P23760 479 aa12.82□□□□□ -0.36
CCBE1-202ENST00000439986 PNOCQ13519 176 aa12.82□□□□□ -0.36
CCBE1-202ENST00000439986 ZNF174Q15697 407 aa12.82□□□□□ -0.36
CCBE1-202ENST00000439986 GEN1Q17RS7 908 aa12.82□□□□□ -0.36
CCBE1-202ENST00000439986 GPR161Q8N6U8 529 aaKnown RBP12.82□□□□□ -0.36
CCBE1-202ENST00000439986 FAM169AQ9Y6X4 670 aa12.82□□□□□ -0.36
CCBE1-202ENST00000439986 VWA3AA6NCI4 1184 aa12.82□□□□□ -0.36
CCBE1-202ENST00000439986 GCP02774 474 aa12.82□□□□□ -0.36
CCBE1-202ENST00000439986 ADKP55263 362 aaKnown RBP12.82□□□□□ -0.36
CCBE1-202ENST00000439986 NCBP1Q09161 790 aaKnown RBP12.82□□□□□ -0.36
CCBE1-202ENST00000439986 C11orf57Q6ZUT1 292 aaPredicted RBP12.82□□□□□ -0.36
CCBE1-202ENST00000439986 SDCCAG8Q86SQ7 713 aaPredicted RBP12.82□□□□□ -0.36
CCBE1-202ENST00000439986 RNF34Q969K3 372 aa12.82□□□□□ -0.36
CCBE1-202ENST00000439986 SMC1BQ8NDV3 1235 aa12.82□□□□□ -0.36
CCBE1-202ENST00000439986 NLRP3Q96P20 1036 aa12.82□□□□□ -0.36
CCBE1-202ENST00000439986 NUB1Q9Y5A7 615 aa12.82□□□□□ -0.36
CCBE1-202ENST00000439986 AATKQ6ZMQ8 1374 aa12.81□□□□□ -0.36
CCBE1-202ENST00000439986 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.81□□□□□ -0.36
CCBE1-202ENST00000439986 KCNQ3O43525 872 aa12.81□□□□□ -0.36
CCBE1-202ENST00000439986 CFAP157Q5JU67 520 aa12.81□□□□□ -0.36
CCBE1-202ENST00000439986 AFAP1L1Q8TED9 768 aa12.81□□□□□ -0.36
CCBE1-202ENST00000439986 PLVAPQ9BX97 442 aa12.81□□□□□ -0.36
CCBE1-202ENST00000439986 PPANQ9NQ55 473 aaKnown RBP12.81□□□□□ -0.36
CCBE1-202ENST00000439986 TXNDC16Q9P2K2 825 aa12.81□□□□□ -0.36
CCBE1-202ENST00000439986 AGTPBP1Q9UPW5 1226 aa12.81□□□□□ -0.36
CCBE1-202ENST00000439986 GPAA1O43292 621 aa12.81□□□□□ -0.36
CCBE1-202ENST00000439986 CRCPO75575 148 aa12.81□□□□□ -0.36
CCBE1-202ENST00000439986 TUBB2AQ13885 445 aa12.81□□□□□ -0.36
CCBE1-202ENST00000439986 ZSCAN26Q16670 478 aa12.81□□□□□ -0.36
CCBE1-202ENST00000439986 CEP57Q86XR8 500 aa12.81□□□□□ -0.36
CCBE1-202ENST00000439986 APPBP2Q92624 585 aa12.81□□□□□ -0.36
CCBE1-202ENST00000439986 TUBB2BQ9BVA1 445 aa12.81□□□□□ -0.36
CCBE1-202ENST00000439986 DSCC1Q9BVC3 393 aa12.81□□□□□ -0.36
CCBE1-202ENST00000439986 EMC3Q9P0I2 261 aa12.81□□□□□ -0.36
CCBE1-202ENST00000439986 ATP6V0A2Q9Y487 856 aa12.81□□□□□ -0.36
CCBE1-202ENST00000439986 A0A087WWV3 80 aa12.81□□□□□ -0.36
CCBE1-202ENST00000439986 SORBS3O60504 671 aa12.81□□□□□ -0.36
CCBE1-202ENST00000439986 KRT10P13645 584 aa12.81□□□□□ -0.36
CCBE1-202ENST00000439986 SEMA3FQ13275 785 aa12.81□□□□□ -0.36
CCBE1-202ENST00000439986 TMEM87BQ96K49 555 aa12.81□□□□□ -0.36
CCBE1-202ENST00000439986 GINS2Q9Y248 185 aa12.81□□□□□ -0.36
CCBE1-202ENST00000439986 PARP3Q9Y6F1 533 aa12.81□□□□□ -0.36
CCBE1-202ENST00000439986 CDC25BP30305 580 aa12.81□□□□□ -0.36
CCBE1-202ENST00000439986 WHAMMP3Q1A5X7 153 aa12.81□□□□□ -0.36
CCBE1-202ENST00000439986 USP37Q86T82 979 aa12.81□□□□□ -0.36
CCBE1-202ENST00000439986 SPATS2Q86XZ4 545 aaKnown RBP12.81□□□□□ -0.36
CCBE1-202ENST00000439986 ZNF594Q96JF6 807 aaPredicted RBP12.81□□□□□ -0.36
CCBE1-202ENST00000439986 SYNRGQ9UMZ2 1314 aa12.81□□□□□ -0.36
CCBE1-202ENST00000439986 MAP7Q14244 749 aa12.81□□□□□ -0.36
CCBE1-202ENST00000439986 POSTNQ15063 836 aa12.81□□□□□ -0.36
CCBE1-202ENST00000439986 MYL10Q9BUA6 226 aa12.81□□□□□ -0.36
CCBE1-202ENST00000439986 NDUFA8P51970 172 aa12.8□□□□□ -0.36
CCBE1-202ENST00000439986 CCDC80Q76M96 950 aa12.8□□□□□ -0.36
CCBE1-202ENST00000439986 SMC6Q96SB8 1091 aa12.8□□□□□ -0.36
CCBE1-202ENST00000439986 HAUS7Q99871 368 aa12.8□□□□□ -0.36
CCBE1-202ENST00000439986 TRIM4Q9C037 500 aa12.8□□□□□ -0.36
CCBE1-202ENST00000439986 PFDN4Q9NQP4 134 aa12.8□□□□□ -0.36
CCBE1-202ENST00000439986 POLE3Q9NRF9 147 aa12.8□□□□□ -0.36
CCBE1-202ENST00000439986 PAIP2BQ9ULR5 123 aaKnown RBP12.8□□□□□ -0.36
CCBE1-202ENST00000439986 CFAP65Q6ZU64 1925 aaKnown RBP12.8□□□□□ -0.36
CCBE1-202ENST00000439986 PSDA5PKW4 1024 aaPredicted RBP12.8□□□□□ -0.36
CCBE1-202ENST00000439986 EFCAB8A8MWE9 144 aa12.8□□□□□ -0.36
CCBE1-202ENST00000439986 SNX16P57768 344 aa12.8□□□□□ -0.36
CCBE1-202ENST00000439986 SCRN1Q12765 414 aa12.8□□□□□ -0.36
CCBE1-202ENST00000439986 ZNF365Q70YC5 407 aa12.8□□□□□ -0.36
CCBE1-202ENST00000439986 ZNF274Q96GC6 653 aaPredicted RBP12.8□□□□□ -0.36
CCBE1-202ENST00000439986 VMP1Q96GC9 406 aa12.8□□□□□ -0.36
CCBE1-202ENST00000439986 DESI2Q9BSY9 194 aa12.8□□□□□ -0.36
CCBE1-202ENST00000439986 YY1AP1Q9H869 796 aa12.8□□□□□ -0.36
CCBE1-202ENST00000439986 VAV2P52735 878 aa12.8□□□□□ -0.36
CCBE1-202ENST00000439986 CCDC38Q502W7 563 aa12.8□□□□□ -0.36
CCBE1-202ENST00000439986 GJC2Q5T442 439 aaPredicted RBP12.8□□□□□ -0.36
CCBE1-202ENST00000439986 GEMIN8Q9NWZ8 242 aaKnown RBP12.8□□□□□ -0.36
CCBE1-202ENST00000439986 FBXO2Q9UK22 296 aaPredicted RBP12.8□□□□□ -0.36
CCBE1-202ENST00000439986 KRT79Q5XKE5 535 aa12.8□□□□□ -0.36
CCBE1-202ENST00000439986 CYP26C1Q6V0L0 522 aa12.8□□□□□ -0.36
CCBE1-202ENST00000439986 MTA3Q9BTC8 594 aa12.8□□□□□ -0.36
CCBE1-202ENST00000439986 MAPK8IP1Q9UQF2 711 aa12.8□□□□□ -0.36
CCBE1-202ENST00000439986 RTL9Q8NET4 1388 aa12.8□□□□□ -0.36
CCBE1-202ENST00000439986 PLEKHG3A1L390 1219 aa12.8□□□□□ -0.36
CCBE1-202ENST00000439986 TAF5LO75529 589 aa12.8□□□□□ -0.36
CCBE1-202ENST00000439986 PPP2R2CQ9Y2T4 447 aa12.8□□□□□ -0.36
CCBE1-202ENST00000439986 ABL2P42684 1182 aa12.79□□□□□ -0.36
CCBE1-202ENST00000439986 PPP1R13BQ96KQ4 1090 aa12.79□□□□□ -0.36
CCBE1-202ENST00000439986 ZNF711Q9Y462 761 aa12.79□□□□□ -0.36
CCBE1-202ENST00000439986 CCDC169A6NNP5 214 aa12.79□□□□□ -0.36
CCBE1-202ENST00000439986 STK25O00506 426 aa12.79□□□□□ -0.36
CCBE1-202ENST00000439986 MBD4O95243 580 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms