RNA–Protein interactions for RNA: ENST00000439984.7

PCNX1-202, Transcript of pecanex 1, humanhuman

TSL 1 (best) BASIC

Gene PCNX1, Length 6,988 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-202ENST00000439984 ZNF521Q96K83 1311 aa16.24■□□□□ 0.19
PCNX1-202ENST00000439984 RBM5P52756 815 aaKnown RBP eCLIP16.24■□□□□ 0.19
PCNX1-202ENST00000439984 ATP2A2P16615 1042 aaKnown RBP16.24■□□□□ 0.19
PCNX1-202ENST00000439984 NUCKS1Q9H1E3 243 aaKnown RBP16.23■□□□□ 0.19
PCNX1-202ENST00000439984 IQSEC3Q9UPP2 1182 aaPredicted RBP16.23■□□□□ 0.19
PCNX1-202ENST00000439984 CCDC105Q8IYK2 499 aa16.23■□□□□ 0.19
PCNX1-202ENST00000439984 BICD1Q96G01 975 aa16.23■□□□□ 0.19
PCNX1-202ENST00000439984 PSMD1Q99460 953 aa16.23■□□□□ 0.19
PCNX1-202ENST00000439984 TSPYL2Q9H2G4 693 aaPredicted RBP16.23■□□□□ 0.19
PCNX1-202ENST00000439984 ZNF287Q9HBT7 754 aa16.23■□□□□ 0.19
PCNX1-202ENST00000439984 ZSWIM6Q9HCJ5 1215 aa16.23■□□□□ 0.19
PCNX1-202ENST00000439984 GGCXP38435 758 aa16.23■□□□□ 0.19
PCNX1-202ENST00000439984 EPHB4P54760 987 aa16.23■□□□□ 0.19
PCNX1-202ENST00000439984 FERMT2Q96AC1 680 aa16.23■□□□□ 0.19
PCNX1-202ENST00000439984 KRIT1O00522 736 aa16.23■□□□□ 0.19
PCNX1-202ENST00000439984 NR1D1P20393 614 aa16.23■□□□□ 0.19
PCNX1-202ENST00000439984 AMOTQ4VCS5 1084 aa16.23■□□□□ 0.19
PCNX1-202ENST00000439984 TM6SF1Q9BZW5 370 aa16.23■□□□□ 0.19
PCNX1-202ENST00000439984 AOX1Q06278 1338 aa16.23■□□□□ 0.19
PCNX1-202ENST00000439984 NAPAP54920 295 aa16.23■□□□□ 0.19
PCNX1-202ENST00000439984 SCOCQ9UIL1 159 aa16.23■□□□□ 0.19
PCNX1-202ENST00000439984 ARHGAP42A6NI28 874 aa16.22■□□□□ 0.19
PCNX1-202ENST00000439984 PIK3AP1Q6ZUJ8 805 aa16.22■□□□□ 0.19
PCNX1-202ENST00000439984 DDX23Q9BUQ8 820 aaKnown RBP16.22■□□□□ 0.19
PCNX1-202ENST00000439984 PRDM11Q9NQV5 511 aa16.22■□□□□ 0.19
PCNX1-202ENST00000439984 INTS9Q9NV88 658 aaKnown RBP16.22■□□□□ 0.19
PCNX1-202ENST00000439984 TRMT112Q9UI30 125 aaKnown RBP16.22■□□□□ 0.19
PCNX1-202ENST00000439984 PPP1R9AQ9ULJ8 1098 aa16.22■□□□□ 0.19
PCNX1-202ENST00000439984 ANKRD13DQ6ZTN6 518 aa16.22■□□□□ 0.19
PCNX1-202ENST00000439984 XAGE3Q8WTP9 111 aa16.22■□□□□ 0.19
PCNX1-202ENST00000439984 ENO4A6NNW6 628 aa16.22■□□□□ 0.19
PCNX1-202ENST00000439984 ATP1A3P13637 1013 aa16.22■□□□□ 0.19
PCNX1-202ENST00000439984 MORC3Q14149 939 aa16.22■□□□□ 0.19
PCNX1-202ENST00000439984 CFAP61Q8NHU2 1237 aa16.22■□□□□ 0.19
PCNX1-202ENST00000439984 VCX3AQ9NNX9 186 aa16.22■□□□□ 0.19
PCNX1-202ENST00000439984 PDHA1P08559 390 aa16.22■□□□□ 0.19
PCNX1-202ENST00000439984 HOMER3Q9NSC5 361 aa16.22■□□□□ 0.19
PCNX1-202ENST00000439984 SYNMO15061 1565 aa16.22■□□□□ 0.19
PCNX1-202ENST00000439984 CTNND1O60716 968 aaKnown RBP16.22■□□□□ 0.19
PCNX1-202ENST00000439984 PDE4BQ07343 736 aa16.22■□□□□ 0.19
PCNX1-202ENST00000439984 ADCY1Q08828 1119 aa16.22■□□□□ 0.19
PCNX1-202ENST00000439984 STXBP4Q6ZWJ1 553 aa16.22■□□□□ 0.19
PCNX1-202ENST00000439984 KCNV2Q8TDN2 545 aa16.22■□□□□ 0.19
PCNX1-202ENST00000439984 ALDH1L1O75891 902 aa16.22■□□□□ 0.19
PCNX1-202ENST00000439984 LARGE1O95461 756 aa16.22■□□□□ 0.19
PCNX1-202ENST00000439984 KLHL30Q0D2K2 578 aa16.22■□□□□ 0.19
PCNX1-202ENST00000439984 KSR2Q6VAB6 950 aa16.22■□□□□ 0.19
PCNX1-202ENST00000439984 PRPF38AQ8NAV1 312 aaKnown RBP16.22■□□□□ 0.19
PCNX1-202ENST00000439984 ZCCHC11Q5TAX3 1644 aaKnown RBP16.22■□□□□ 0.19
PCNX1-202ENST00000439984 TOGARAM2Q6ZUX3 1019 aa16.21■□□□□ 0.19
PCNX1-202ENST00000439984 CROCCP2Q86T23 111 aa16.21■□□□□ 0.19
PCNX1-202ENST00000439984 EDC3Q96F86 508 aaKnown RBP16.21■□□□□ 0.19
PCNX1-202ENST00000439984 EEF2KMTQ96G04 330 aa16.21■□□□□ 0.19
PCNX1-202ENST00000439984 SH3GL3Q99963 347 aa16.21■□□□□ 0.19
PCNX1-202ENST00000439984 COPS6Q7L5N1 327 aa16.21■□□□□ 0.19
PCNX1-202ENST00000439984 UNC5CLQ8IV45 518 aa16.21■□□□□ 0.19
PCNX1-202ENST00000439984 SUN1O94901 812 aa16.21■□□□□ 0.19
PCNX1-202ENST00000439984 APBA1Q02410 837 aa16.21■□□□□ 0.19
PCNX1-202ENST00000439984 EYA1Q99502 592 aa16.21■□□□□ 0.19
PCNX1-202ENST00000439984 NOP53Q9NZM5 478 aaKnown RBP16.21■□□□□ 0.19
PCNX1-202ENST00000439984 hCG_2014768A0A024R1R8 64 aa16.21■□□□□ 0.18
PCNX1-202ENST00000439984 HEXIM1O94992 359 aaKnown RBP16.21■□□□□ 0.18
PCNX1-202ENST00000439984 TCP1P17987 556 aaKnown RBP16.21■□□□□ 0.18
PCNX1-202ENST00000439984 KRT79Q5XKE5 535 aa16.21■□□□□ 0.18
PCNX1-202ENST00000439984 MIER3Q7Z3K6 550 aa16.21■□□□□ 0.18
PCNX1-202ENST00000439984 MYO1EQ12965 1108 aa16.2■□□□□ 0.18
PCNX1-202ENST00000439984 PLA2G4DQ86XP0 818 aa16.2■□□□□ 0.18
PCNX1-202ENST00000439984 LRRC43Q8N309 656 aa16.2■□□□□ 0.18
PCNX1-202ENST00000439984 RAB17Q9H0T7 212 aa16.2■□□□□ 0.18
PCNX1-202ENST00000439984 TNFAIP3P21580 790 aa16.2■□□□□ 0.18
PCNX1-202ENST00000439984 CYP7A1P22680 504 aa16.2■□□□□ 0.18
PCNX1-202ENST00000439984 CMA1P23946 247 aa16.2■□□□□ 0.18
PCNX1-202ENST00000439984 NAA35Q5VZE5 725 aa16.2■□□□□ 0.18
PCNX1-202ENST00000439984 RILPQ96NA2 401 aa16.2■□□□□ 0.18
PCNX1-202ENST00000439984 MAP3K19Q56UN5 1328 aa16.2■□□□□ 0.18
PCNX1-202ENST00000439984 SFMBT2Q5VUG0 894 aa16.2■□□□□ 0.18
PCNX1-202ENST00000439984 CCDC13Q8IYE1 715 aa16.2■□□□□ 0.18
PCNX1-202ENST00000439984 PLS1Q14651 629 aa16.2■□□□□ 0.18
PCNX1-202ENST00000439984 SSH2Q76I76 1423 aa16.2■□□□□ 0.18
PCNX1-202ENST00000439984 SV2BQ7L1I2 683 aa16.19■□□□□ 0.18
PCNX1-202ENST00000439984 MIGA1Q8NAN2 632 aa16.19■□□□□ 0.18
PCNX1-202ENST00000439984 HELLSQ9NRZ9 838 aa16.19■□□□□ 0.18
PCNX1-202ENST00000439984 LARSQ9P2J5 1176 aaKnown RBP16.19■□□□□ 0.18
PCNX1-202ENST00000439984 PLCD1P51178 756 aa16.19■□□□□ 0.18
PCNX1-202ENST00000439984 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.19■□□□□ 0.18
PCNX1-202ENST00000439984 NUF2Q9BZD4 464 aa16.19■□□□□ 0.18
PCNX1-202ENST00000439984 PCDHA5Q9Y5H7 936 aa16.19■□□□□ 0.18
PCNX1-202ENST00000439984 hCG_1642624A0A1W2PR95 340 aa16.19■□□□□ 0.18
PCNX1-202ENST00000439984 TNIP1Q15025 636 aa16.19■□□□□ 0.18
PCNX1-202ENST00000439984 CAPRIN2Q6IMN6 1127 aaKnown RBP16.19■□□□□ 0.18
PCNX1-202ENST00000439984 CLUL1Q15846 466 aa16.19■□□□□ 0.18
PCNX1-202ENST00000439984 PARP9Q8IXQ6 854 aa16.19■□□□□ 0.18
PCNX1-202ENST00000439984 KLC4Q9NSK0 619 aa16.19■□□□□ 0.18
PCNX1-202ENST00000439984 TRPM1Q7Z4N2 1603 aa16.19■□□□□ 0.18
PCNX1-202ENST00000439984 TBC1D8O95759 1140 aa16.19■□□□□ 0.18
PCNX1-202ENST00000439984 AKNAD1Q5T1N1 836 aa16.19■□□□□ 0.18
PCNX1-202ENST00000439984 NOVA2Q9UNW9 492 aaKnown RBP16.19■□□□□ 0.18
PCNX1-202ENST00000439984 CREB3O43889 395 aa16.18■□□□□ 0.18
PCNX1-202ENST00000439984 SH3BGRP55822 239 aaPredicted RBP16.18■□□□□ 0.18
PCNX1-202ENST00000439984 VSTM4Q8IW00 320 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms