RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 ADCY5O95622 1261 aa13.53□□□□□ -0.24
SMAD3-202ENST00000439724 BMP15O95972 392 aa13.53□□□□□ -0.24
SMAD3-202ENST00000439724 TOP1P11387 765 aaKnown RBP13.53□□□□□ -0.24
SMAD3-202ENST00000439724 SYKP43405 635 aa13.53□□□□□ -0.24
SMAD3-202ENST00000439724 CRKP46108 304 aa13.53□□□□□ -0.24
SMAD3-202ENST00000439724 BAG6P46379 1132 aa13.53□□□□□ -0.24
SMAD3-202ENST00000439724 ZNF165P49910 485 aa13.53□□□□□ -0.24
SMAD3-202ENST00000439724 SCNN1DP51172 638 aa13.53□□□□□ -0.24
SMAD3-202ENST00000439724 PICALMQ13492 652 aa13.53□□□□□ -0.24
SMAD3-202ENST00000439724 GRIPAP1Q4V328 841 aa13.53□□□□□ -0.24
SMAD3-202ENST00000439724 STAG2Q8N3U4 1231 aa13.53□□□□□ -0.24
SMAD3-202ENST00000439724 ZNF579Q8NAF0 562 aaKnown RBP13.53□□□□□ -0.24
SMAD3-202ENST00000439724 OSBPL5Q9H0X9 879 aaPredicted RBP13.53□□□□□ -0.24
SMAD3-202ENST00000439724 DNAJC25Q9H1X3 360 aa13.53□□□□□ -0.24
SMAD3-202ENST00000439724 CABP5Q9NP86 173 aa13.53□□□□□ -0.24
SMAD3-202ENST00000439724 ANO10Q9NW15 660 aa13.53□□□□□ -0.24
SMAD3-202ENST00000439724 FBXO2Q9UK22 296 aaPredicted RBP13.53□□□□□ -0.24
SMAD3-202ENST00000439724 NOL7Q9UMY1 257 aaKnown RBP13.53□□□□□ -0.24
SMAD3-202ENST00000439724 STX8Q9UNK0 236 aa13.53□□□□□ -0.24
SMAD3-202ENST00000439724 PCDHB6Q9Y5E3 794 aa13.53□□□□□ -0.24
SMAD3-202ENST00000439724 TRIM75PA6NK02 468 aa13.52□□□□□ -0.25
SMAD3-202ENST00000439724 CALML3P27482 149 aa13.52□□□□□ -0.25
SMAD3-202ENST00000439724 SMARCA1P28370 1054 aa13.52□□□□□ -0.25
SMAD3-202ENST00000439724 KIAA2012Q0VF49 1180 aa13.52□□□□□ -0.25
SMAD3-202ENST00000439724 LUZP1Q86V48 1076 aa13.52□□□□□ -0.25
SMAD3-202ENST00000439724 SPZ1Q9BXG8 430 aa13.52□□□□□ -0.25
SMAD3-202ENST00000439724 RTN4Q9NQC3 1192 aaKnown RBP13.52□□□□□ -0.25
SMAD3-202ENST00000439724 KIAA1468Q9P260 1216 aa13.52□□□□□ -0.25
SMAD3-202ENST00000439724 BAZ2BQ9UIF8 2168 aaKnown RBP13.51□□□□□ -0.25
SMAD3-202ENST00000439724 IGKV6D-41A0A0C4DH26 115 aa13.51□□□□□ -0.25
SMAD3-202ENST00000439724 FAM205CA6NFA0 338 aa13.51□□□□□ -0.25
SMAD3-202ENST00000439724 CLCN1P35523 988 aa13.51□□□□□ -0.25
SMAD3-202ENST00000439724 TRAPPC10P48553 1259 aa13.51□□□□□ -0.25
SMAD3-202ENST00000439724 NLRP5P59047 1200 aa13.51□□□□□ -0.25
SMAD3-202ENST00000439724 SLC35G1Q2M3R5 365 aa13.51□□□□□ -0.25
SMAD3-202ENST00000439724 C11orf57Q6ZUT1 292 aaPredicted RBP13.51□□□□□ -0.25
SMAD3-202ENST00000439724 ELOA2Q8IYF1 753 aaPredicted RBP13.51□□□□□ -0.25
SMAD3-202ENST00000439724 CEP95Q96GE4 821 aa13.51□□□□□ -0.25
SMAD3-202ENST00000439724 CLIC6Q96NY7 704 aa13.51□□□□□ -0.25
SMAD3-202ENST00000439724 EHD4Q9H223 541 aa13.51□□□□□ -0.25
SMAD3-202ENST00000439724 SERPINB13Q9UIV8 391 aa13.51□□□□□ -0.25
SMAD3-202ENST00000439724 SRPRBQ9Y5M8 271 aaKnown RBP13.51□□□□□ -0.25
SMAD3-202ENST00000439724 SIPA1L1O43166 1804 aa13.51□□□□□ -0.25
SMAD3-202ENST00000439724 KIF13BQ9NQT8 1826 aa13.51□□□□□ -0.25
SMAD3-202ENST00000439724 AP5Z1O43299 807 aa13.5□□□□□ -0.25
SMAD3-202ENST00000439724 CYTH3O43739 400 aa13.5□□□□□ -0.25
SMAD3-202ENST00000439724 NPM3O75607 178 aaKnown RBP13.5□□□□□ -0.25
SMAD3-202ENST00000439724 HLA-DOAP06340 250 aa13.5□□□□□ -0.25
SMAD3-202ENST00000439724 PARP1P09874 1014 aaKnown RBP13.5□□□□□ -0.25
SMAD3-202ENST00000439724 SF3B2Q13435 895 aaKnown RBP13.5□□□□□ -0.25
SMAD3-202ENST00000439724 IQCB1Q15051 598 aa13.5□□□□□ -0.25
SMAD3-202ENST00000439724 EARS2Q5JPH6 523 aaKnown RBP13.5□□□□□ -0.25
SMAD3-202ENST00000439724 GALNT17Q6IS24 598 aa13.5□□□□□ -0.25
SMAD3-202ENST00000439724 CEP57L1Q8IYX8 460 aa13.5□□□□□ -0.25
SMAD3-202ENST00000439724 DAGLBQ8NCG7 672 aa13.5□□□□□ -0.25
SMAD3-202ENST00000439724 CCDC148Q8NFR7 591 aa13.5□□□□□ -0.25
SMAD3-202ENST00000439724 KCNQ5Q9NR82 932 aa13.5□□□□□ -0.25
SMAD3-202ENST00000439724 KCNH3Q9ULD8 1083 aa13.5□□□□□ -0.25
SMAD3-202ENST00000439724 KLRF2D3W0D1 207 aa13.49□□□□□ -0.25
SMAD3-202ENST00000439724 AOC3Q16853 763 aa13.49□□□□□ -0.25
SMAD3-202ENST00000439724 TTC38Q5R3I4 469 aa13.49□□□□□ -0.25
SMAD3-202ENST00000439724 KIAA0825Q8IV33 1275 aa13.49□□□□□ -0.25
SMAD3-202ENST00000439724 BLIDQ8IZY5 108 aa13.49□□□□□ -0.25
SMAD3-202ENST00000439724 SLC16A10Q8TF71 515 aa13.49□□□□□ -0.25
SMAD3-202ENST00000439724 IDI2Q9BXS1 227 aa13.49□□□□□ -0.25
SMAD3-202ENST00000439724 MTMR4Q9NYA4 1195 aa13.49□□□□□ -0.25
SMAD3-202ENST00000439724 FAM13BQ9NYF5 915 aa13.49□□□□□ -0.25
SMAD3-202ENST00000439724 ZNF219Q9P2Y4 722 aaPredicted RBP13.49□□□□□ -0.25
SMAD3-202ENST00000439724 TUBE1Q9UJT0 475 aa13.49□□□□□ -0.25
SMAD3-202ENST00000439724 SERPINA10Q9UK55 444 aa13.49□□□□□ -0.25
SMAD3-202ENST00000439724 PTMAP06454 111 aaKnown RBP13.49□□□□□ -0.25
SMAD3-202ENST00000439724 AKR1B1P15121 316 aa13.49□□□□□ -0.25
SMAD3-202ENST00000439724 VEGFAP15692 232 aaPredicted RBP13.49□□□□□ -0.25
SMAD3-202ENST00000439724 SHMT1P34896 483 aa13.49□□□□□ -0.25
SMAD3-202ENST00000439724 KRBA2Q6ZNG9 492 aa13.49□□□□□ -0.25
SMAD3-202ENST00000439724 FERMT2Q96AC1 680 aa13.49□□□□□ -0.25
SMAD3-202ENST00000439724 BPIFA3Q9BQP9 254 aa13.49□□□□□ -0.25
SMAD3-202ENST00000439724 NAT10Q9H0A0 1025 aaKnown RBP13.49□□□□□ -0.25
SMAD3-202ENST00000439724 DHX36Q9H2U1 1008 aaKnown RBP13.49□□□□□ -0.25
SMAD3-202ENST00000439724 PCDHA4Q9UN74 947 aa13.49□□□□□ -0.25
SMAD3-202ENST00000439724 ZKSCAN5Q9Y2L8 839 aa13.49□□□□□ -0.25
SMAD3-202ENST00000439724 COL2A1P02458 1487 aaPredicted RBP13.48□□□□□ -0.25
SMAD3-202ENST00000439724 STXBP3O00186 592 aa13.48□□□□□ -0.25
SMAD3-202ENST00000439724 ATP2B1P20020 1258 aa13.48□□□□□ -0.25
SMAD3-202ENST00000439724 MSNP26038 577 aaKnown RBP13.48□□□□□ -0.25
SMAD3-202ENST00000439724 NLRP12P59046 1061 aa13.48□□□□□ -0.25
SMAD3-202ENST00000439724 GRIN1Q05586 938 aa13.48□□□□□ -0.25
SMAD3-202ENST00000439724 NFIAQ12857 509 aa13.48□□□□□ -0.25
SMAD3-202ENST00000439724 ZRSR1Q15695 479 aaKnown RBP13.48□□□□□ -0.25
SMAD3-202ENST00000439724 CCDC93Q567U6 631 aa13.48□□□□□ -0.25
SMAD3-202ENST00000439724 NOM1Q5C9Z4 860 aaKnown RBP13.48□□□□□ -0.25
SMAD3-202ENST00000439724 PPP4R3BQ5MIZ7 849 aa13.48□□□□□ -0.25
SMAD3-202ENST00000439724 WWC2Q6AWC2 1192 aa13.48□□□□□ -0.25
SMAD3-202ENST00000439724 PIBF1Q8WXW3 757 aa13.48□□□□□ -0.25
SMAD3-202ENST00000439724 GPKOWQ92917 476 aaPredicted RBP eCLIP13.48□□□□□ -0.25
SMAD3-202ENST00000439724 CCDC17Q96LX7 622 aa13.48□□□□□ -0.25
SMAD3-202ENST00000439724 BARHL2Q9NY43 387 aa13.48□□□□□ -0.25
SMAD3-202ENST00000439724 GOLGA6L19H0YKK7 550 aa13.47□□□□□ -0.25
SMAD3-202ENST00000439724 M0R2N6 131 aa13.47□□□□□ -0.25
SMAD3-202ENST00000439724 WNT7AO00755 349 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms