RNA–Protein interactions for RNA: ENST00000439247.2

PCNX3-202, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 3,104 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-202ENST00000439247 MMP1P03956 469 aa15.34■□□□□ 0.05
PCNX3-202ENST00000439247 MAGEA9P43362 315 aa15.34■□□□□ 0.05
PCNX3-202ENST00000439247 ICE2Q659A1 982 aa15.34■□□□□ 0.05
PCNX3-202ENST00000439247 EHD4Q9H223 541 aa15.34■□□□□ 0.05
PCNX3-202ENST00000439247 TJP1Q07157 1748 aa15.34■□□□□ 0.05
PCNX3-202ENST00000439247 CCDC57Q2TAC2 916 aa15.34■□□□□ 0.05
PCNX3-202ENST00000439247 EARS2Q5JPH6 523 aaKnown RBP15.34■□□□□ 0.05
PCNX3-202ENST00000439247 FAM71BQ8TC56 605 aa15.34■□□□□ 0.05
PCNX3-202ENST00000439247 PIH1D3Q9NQM4 214 aaKnown RBP15.34■□□□□ 0.05
PCNX3-202ENST00000439247 DACH1Q9UI36 760 aa15.34■□□□□ 0.05
PCNX3-202ENST00000439247 CTNND2Q9UQB3 1225 aa15.34■□□□□ 0.05
PCNX3-202ENST00000439247 IFIT3O14879 490 aaKnown RBP15.34■□□□□ 0.05
PCNX3-202ENST00000439247 STARD3NLO95772 234 aa15.34■□□□□ 0.05
PCNX3-202ENST00000439247 ZFYP08048 801 aaPredicted RBP15.34■□□□□ 0.05
PCNX3-202ENST00000439247 SPATA1Q5VX52 437 aa15.34■□□□□ 0.05
PCNX3-202ENST00000439247 FAM89AQ96GI7 184 aa15.34■□□□□ 0.05
PCNX3-202ENST00000439247 BLZF1Q9H2G9 400 aa15.34■□□□□ 0.05
PCNX3-202ENST00000439247 MYO6Q9UM54 1294 aa15.34■□□□□ 0.05
PCNX3-202ENST00000439247 MAPK8IP1Q9UQF2 711 aa15.34■□□□□ 0.05
PCNX3-202ENST00000439247 SLC12A7Q9Y666 1083 aa15.34■□□□□ 0.05
PCNX3-202ENST00000439247 DDX60Q8IY21 1712 aaKnown RBP15.33■□□□□ 0.05
PCNX3-202ENST00000439247 CUL4BQ13620 913 aa15.33■□□□□ 0.05
PCNX3-202ENST00000439247 E2F4Q16254 413 aa15.33■□□□□ 0.05
PCNX3-202ENST00000439247 NOM1Q5C9Z4 860 aaKnown RBP15.33■□□□□ 0.05
PCNX3-202ENST00000439247 TAB2Q9NYJ8 693 aa15.33■□□□□ 0.05
PCNX3-202ENST00000439247 RGS17Q9UGC6 210 aaPredicted RBP15.33■□□□□ 0.05
PCNX3-202ENST00000439247 WWC3Q9ULE0 1092 aa15.33■□□□□ 0.05
PCNX3-202ENST00000439247 JRKLQ9Y4A0 524 aa15.33■□□□□ 0.05
PCNX3-202ENST00000439247 MYO5AQ9Y4I1 1855 aaKnown RBP15.33■□□□□ 0.04
PCNX3-202ENST00000439247 MYBL2P10244 700 aa15.33■□□□□ 0.04
PCNX3-202ENST00000439247 SHISA4Q96DD7 197 aa15.33■□□□□ 0.04
PCNX3-202ENST00000439247 MMS19Q96T76 1030 aa15.33■□□□□ 0.04
PCNX3-202ENST00000439247 NUP88Q99567 741 aaPredicted RBP15.33■□□□□ 0.04
PCNX3-202ENST00000439247 POTEB2H3BUK9 544 aa15.32■□□□□ 0.04
PCNX3-202ENST00000439247 MRPS25P82663 173 aaKnown RBP15.32■□□□□ 0.04
PCNX3-202ENST00000439247 REXO2Q9Y3B8 237 aaKnown RBP15.32■□□□□ 0.04
PCNX3-202ENST00000439247 ZNF532Q9HCE3 1301 aa15.32■□□□□ 0.04
PCNX3-202ENST00000439247 ADD2P35612 726 aa15.32■□□□□ 0.04
PCNX3-202ENST00000439247 CORO7P57737 925 aa15.32■□□□□ 0.04
PCNX3-202ENST00000439247 AMPD2Q01433 879 aa15.32■□□□□ 0.04
PCNX3-202ENST00000439247 GOLGA6L1Q8N7Z2 621 aa15.32■□□□□ 0.04
PCNX3-202ENST00000439247 ABHD10Q9NUJ1 306 aa15.32■□□□□ 0.04
PCNX3-202ENST00000439247 BRWD3Q6RI45 1802 aa15.32■□□□□ 0.04
PCNX3-202ENST00000439247 PPP1R3GB7ZBB8 358 aa15.32■□□□□ 0.04
PCNX3-202ENST00000439247 N4BP3O15049 544 aa15.32■□□□□ 0.04
PCNX3-202ENST00000439247 RPS6KA5O75582 802 aa15.32■□□□□ 0.04
PCNX3-202ENST00000439247 FMNL1O95466 1100 aaPredicted RBP15.32■□□□□ 0.04
PCNX3-202ENST00000439247 ERCC5P28715 1186 aaPredicted RBP15.32■□□□□ 0.04
PCNX3-202ENST00000439247 KRT31Q15323 416 aa15.32■□□□□ 0.04
PCNX3-202ENST00000439247 CDKAL1Q5VV42 579 aa15.32■□□□□ 0.04
PCNX3-202ENST00000439247 SPATA20Q8TB22 786 aa15.32■□□□□ 0.04
PCNX3-202ENST00000439247 FBXO41Q8TF61 875 aa15.32■□□□□ 0.04
PCNX3-202ENST00000439247 NUP133Q8WUM0 1156 aa15.32■□□□□ 0.04
PCNX3-202ENST00000439247 PAGE5Q96GU1 130 aa15.32■□□□□ 0.04
PCNX3-202ENST00000439247 ATP1A1P05023 1023 aaKnown RBP15.31■□□□□ 0.04
PCNX3-202ENST00000439247 SAFBQ15424 915 aaKnown RBP eCLIP15.31■□□□□ 0.04
PCNX3-202ENST00000439247 TTC19Q6DKK2 380 aaPredicted RBP15.31■□□□□ 0.04
PCNX3-202ENST00000439247 INTS5Q6P9B9 1019 aaKnown RBP15.31■□□□□ 0.04
PCNX3-202ENST00000439247 NAA15Q9BXJ9 866 aaKnown RBP15.31■□□□□ 0.04
PCNX3-202ENST00000439247 SRPRBQ9Y5M8 271 aaKnown RBP15.31■□□□□ 0.04
PCNX3-202ENST00000439247 PRDM1O75626 825 aa15.31■□□□□ 0.04
PCNX3-202ENST00000439247 CIAO1O76071 339 aa15.31■□□□□ 0.04
PCNX3-202ENST00000439247 PRPF6O94906 941 aaKnown RBP15.31■□□□□ 0.04
PCNX3-202ENST00000439247 CRKLP46109 303 aaKnown RBP15.31■□□□□ 0.04
PCNX3-202ENST00000439247 AFAP1L1Q8TED9 768 aa15.31■□□□□ 0.04
PCNX3-202ENST00000439247 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.31■□□□□ 0.04
PCNX3-202ENST00000439247 SYMPKQ92797 1274 aaKnown RBP15.31■□□□□ 0.04
PCNX3-202ENST00000439247 SMIM22K7EJ46 135 aa15.3■□□□□ 0.04
PCNX3-202ENST00000439247 ZNF185O15231 689 aa15.3■□□□□ 0.04
PCNX3-202ENST00000439247 GGCXP38435 758 aa15.3■□□□□ 0.04
PCNX3-202ENST00000439247 WHAMMP3Q1A5X7 153 aa15.3■□□□□ 0.04
PCNX3-202ENST00000439247 EPB41L4AQ9HCS5 686 aaPredicted RBP15.3■□□□□ 0.04
PCNX3-202ENST00000439247 HPCAL4Q9UM19 191 aa15.3■□□□□ 0.04
PCNX3-202ENST00000439247 TTF2Q9UNY4 1162 aaKnown RBP15.3■□□□□ 0.04
PCNX3-202ENST00000439247 BTAF1O14981 1849 aa15.3■□□□□ 0.04
PCNX3-202ENST00000439247 TBC1D2BQ9UPU7 963 aa15.3■□□□□ 0.04
PCNX3-202ENST00000439247 WDR19Q8NEZ3 1342 aa15.3■□□□□ 0.04
PCNX3-202ENST00000439247 SNAP23O00161 211 aa15.3■□□□□ 0.04
PCNX3-202ENST00000439247 PRKAB2O43741 272 aa15.3■□□□□ 0.04
PCNX3-202ENST00000439247 KRT9P35527 623 aa15.3■□□□□ 0.04
PCNX3-202ENST00000439247 HLFQ16534 295 aa15.3■□□□□ 0.04
PCNX3-202ENST00000439247 ZNF772Q68DY9 489 aaPredicted RBP15.3■□□□□ 0.04
PCNX3-202ENST00000439247 KRT27Q7Z3Y8 459 aa15.3■□□□□ 0.04
PCNX3-202ENST00000439247 CNGA4Q8IV77 575 aa15.3■□□□□ 0.04
PCNX3-202ENST00000439247 TRIML1Q8N9V2 468 aa15.3■□□□□ 0.04
PCNX3-202ENST00000439247 LINC00116Q8NCU8 138 aa15.3■□□□□ 0.04
PCNX3-202ENST00000439247 EEF2KMTQ96G04 330 aa15.3■□□□□ 0.04
PCNX3-202ENST00000439247 ZC3H4Q9UPT8 1303 aaKnown RBP15.3■□□□□ 0.04
PCNX3-202ENST00000439247 MYH14Q7Z406 1995 aaKnown RBP15.3■□□□□ 0.04
PCNX3-202ENST00000439247 FILIP1LQ4L180 1135 aa15.29■□□□□ 0.04
PCNX3-202ENST00000439247 FKBP15Q5T1M5 1219 aa15.29■□□□□ 0.04
PCNX3-202ENST00000439247 MICALL1Q8N3F8 863 aa15.29■□□□□ 0.04
PCNX3-202ENST00000439247 VPS54Q9P1Q0 977 aa15.29■□□□□ 0.04
PCNX3-202ENST00000439247 LOC102724159A0A0B4J2E5 919 aa15.29■□□□□ 0.04
PCNX3-202ENST00000439247 PWP2Q15269 919 aaKnown RBP15.29■□□□□ 0.04
PCNX3-202ENST00000439247 RILPL1Q5EBL4 403 aa15.29■□□□□ 0.04
PCNX3-202ENST00000439247 METTL24Q5JXM2 366 aa15.29■□□□□ 0.04
PCNX3-202ENST00000439247 CCDC148Q8NFR7 591 aa15.29■□□□□ 0.04
PCNX3-202ENST00000439247 TMEM87BQ96K49 555 aa15.29■□□□□ 0.04
PCNX3-202ENST00000439247 POLD4Q9HCU8 107 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms