RNA–Protein interactions for RNA: ENST00000439088.1

LINC00163-202, long intergenic non-protein coding RNA 163, humanhuman

TSL 1 (best)

Gene LINC00163, Length 2,135 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00163-202ENST00000439088 CTAGE5O15320 804 aa17.29■□□□□ 0.36
LINC00163-202ENST00000439088 ZFPM1Q8IX07 1006 aa17.29■□□□□ 0.36
LINC00163-202ENST00000439088 BRMS1Q9HCU9 246 aa17.29■□□□□ 0.36
LINC00163-202ENST00000439088 SH3GLB2Q9NR46 395 aa17.29■□□□□ 0.36
LINC00163-202ENST00000439088 MTMR4Q9NYA4 1195 aa17.29■□□□□ 0.36
LINC00163-202ENST00000439088 FAM198AQ9UFP1 575 aa17.29■□□□□ 0.36
LINC00163-202ENST00000439088 ATF5Q9Y2D1 282 aaPredicted RBP17.29■□□□□ 0.36
LINC00163-202ENST00000439088 VIL1P09327 827 aaKnown RBP17.28■□□□□ 0.36
LINC00163-202ENST00000439088 AKR1B1P15121 316 aa17.28■□□□□ 0.36
LINC00163-202ENST00000439088 CMA1P23946 247 aa17.28■□□□□ 0.36
LINC00163-202ENST00000439088 SHMT1P34896 483 aa17.28■□□□□ 0.36
LINC00163-202ENST00000439088 RSBN1LQ6PCB5 846 aaPredicted RBP17.28■□□□□ 0.36
LINC00163-202ENST00000439088 ZNF277Q9NRM2 450 aaPredicted RBP17.28■□□□□ 0.36
LINC00163-202ENST00000439088 KINO60870 393 aaKnown RBP17.27■□□□□ 0.36
LINC00163-202ENST00000439088 SMARCA1P28370 1054 aa17.27■□□□□ 0.36
LINC00163-202ENST00000439088 UVSSAQ2YD98 709 aa17.27■□□□□ 0.36
LINC00163-202ENST00000439088 CFAP100Q494V2 611 aa17.27■□□□□ 0.36
LINC00163-202ENST00000439088 FMR1NBQ8N0W7 255 aaPredicted RBP17.27■□□□□ 0.36
LINC00163-202ENST00000439088 RNF214Q8ND24 703 aa17.27■□□□□ 0.36
LINC00163-202ENST00000439088 CCDC17Q96LX7 622 aa17.27■□□□□ 0.36
LINC00163-202ENST00000439088 PI4KBQ9UBF8 816 aa17.27■□□□□ 0.36
LINC00163-202ENST00000439088 PSME4Q14997 1843 aa17.27■□□□□ 0.36
LINC00163-202ENST00000439088 PARP1P09874 1014 aaKnown RBP17.27■□□□□ 0.35
LINC00163-202ENST00000439088 MARCKSP29966 332 aaPredicted RBP17.27■□□□□ 0.35
LINC00163-202ENST00000439088 CACNB3P54284 484 aa17.27■□□□□ 0.35
LINC00163-202ENST00000439088 CABP5Q9NP86 173 aa17.27■□□□□ 0.35
LINC00163-202ENST00000439088 A0A1B0GVL5 298 aa17.26■□□□□ 0.35
LINC00163-202ENST00000439088 KLRF2D3W0D1 207 aa17.26■□□□□ 0.35
LINC00163-202ENST00000439088 CCDC173Q0VFZ6 552 aa17.26■□□□□ 0.35
LINC00163-202ENST00000439088 TCP10Q12799 353 aa17.26■□□□□ 0.35
LINC00163-202ENST00000439088 NPY5RQ15761 445 aa17.26■□□□□ 0.35
LINC00163-202ENST00000439088 FOXP4Q8IVH2 680 aaPredicted RBP17.26■□□□□ 0.35
LINC00163-202ENST00000439088 CKAP2LQ8IYA6 745 aa17.26■□□□□ 0.35
LINC00163-202ENST00000439088 PRMT6Q96LA8 375 aaPredicted RBP17.26■□□□□ 0.35
LINC00163-202ENST00000439088 PPP1R9BQ96SB3 815 aa17.26■□□□□ 0.35
LINC00163-202ENST00000439088 SPZ1Q9BXG8 430 aa17.26■□□□□ 0.35
LINC00163-202ENST00000439088 ENTPD3O75355 529 aa17.26■□□□□ 0.35
LINC00163-202ENST00000439088 NDUFA8P51970 172 aa17.26■□□□□ 0.35
LINC00163-202ENST00000439088 NLRP5P59047 1200 aa17.26■□□□□ 0.35
LINC00163-202ENST00000439088 DALRD3Q5D0E6 543 aaKnown RBP17.26■□□□□ 0.35
LINC00163-202ENST00000439088 PPP4R3BQ5MIZ7 849 aa17.26■□□□□ 0.35
LINC00163-202ENST00000439088 FAM177A1Q8N128 213 aaPredicted RBP17.26■□□□□ 0.35
LINC00163-202ENST00000439088 TNFRSF25Q93038 417 aa17.26■□□□□ 0.35
LINC00163-202ENST00000439088 GMLQ99445 158 aa17.26■□□□□ 0.35
LINC00163-202ENST00000439088 TDRD3Q9H7E2 651 aaKnown RBP17.26■□□□□ 0.35
LINC00163-202ENST00000439088 ZNRF3Q9ULT6 936 aa17.26■□□□□ 0.35
LINC00163-202ENST00000439088 DDTLA6NHG4 134 aaPredicted RBP17.25■□□□□ 0.35
LINC00163-202ENST00000439088 PSMD14O00487 310 aa17.25■□□□□ 0.35
LINC00163-202ENST00000439088 CYTH3O43739 400 aa17.25■□□□□ 0.35
LINC00163-202ENST00000439088 CUTAO60888 179 aa17.25■□□□□ 0.35
LINC00163-202ENST00000439088 RAD17O75943 681 aa17.25■□□□□ 0.35
LINC00163-202ENST00000439088 VEGFAP15692 232 aaPredicted RBP17.25■□□□□ 0.35
LINC00163-202ENST00000439088 CALML3P27482 149 aa17.25■□□□□ 0.35
LINC00163-202ENST00000439088 SLC35G1Q2M3R5 365 aa17.25■□□□□ 0.35
LINC00163-202ENST00000439088 PIBF1Q8WXW3 757 aa17.25■□□□□ 0.35
LINC00163-202ENST00000439088 CEP131Q9UPN4 1083 aa17.25■□□□□ 0.35
LINC00163-202ENST00000439088 MTMR7Q9Y216 660 aa17.25■□□□□ 0.35
LINC00163-202ENST00000439088 TTLL1O95922 423 aa17.24■□□□□ 0.35
LINC00163-202ENST00000439088 TYRO3Q06418 890 aa17.24■□□□□ 0.35
LINC00163-202ENST00000439088 SH3BP5LQ7L8J4 393 aa17.24■□□□□ 0.35
LINC00163-202ENST00000439088 HDAC9Q9UKV0 1011 aa17.24■□□□□ 0.35
LINC00163-202ENST00000439088 MORC2Q9Y6X9 1032 aaPredicted RBP17.24■□□□□ 0.35
LINC00163-202ENST00000439088 MYH8P13535 1937 aa17.24■□□□□ 0.35
LINC00163-202ENST00000439088 FAM237AA0A1B0GTK4 181 aa17.24■□□□□ 0.35
LINC00163-202ENST00000439088 GOLGA8HP0CJ92 632 aa17.24■□□□□ 0.35
LINC00163-202ENST00000439088 USP17L2Q6R6M4 530 aa17.24■□□□□ 0.35
LINC00163-202ENST00000439088 SASS6Q6UVJ0 657 aa17.24■□□□□ 0.35
LINC00163-202ENST00000439088 ZSCAN29Q8IWY8 852 aaPredicted RBP17.24■□□□□ 0.35
LINC00163-202ENST00000439088 NIM1KQ8IY84 436 aa17.24■□□□□ 0.35
LINC00163-202ENST00000439088 KRI1Q8N9T8 703 aaKnown RBP17.24■□□□□ 0.35
LINC00163-202ENST00000439088 CLIP2Q9UDT6 1046 aa17.24■□□□□ 0.35
LINC00163-202ENST00000439088 NOL7Q9UMY1 257 aaKnown RBP17.24■□□□□ 0.35
LINC00163-202ENST00000439088 PCDHB6Q9Y5E3 794 aa17.24■□□□□ 0.35
LINC00163-202ENST00000439088 METTL16Q86W50 562 aaKnown RBP17.23■□□□□ 0.35
LINC00163-202ENST00000439088 OGFOD1Q8N543 542 aa17.23■□□□□ 0.35
LINC00163-202ENST00000439088 DNAJC18Q9H819 358 aa17.23■□□□□ 0.35
LINC00163-202ENST00000439088 BAZ2BQ9UIF8 2168 aaKnown RBP17.23■□□□□ 0.35
LINC00163-202ENST00000439088 COL4A5P29400 1685 aa17.23■□□□□ 0.35
LINC00163-202ENST00000439088 TRIM75PA6NK02 468 aa17.23■□□□□ 0.35
LINC00163-202ENST00000439088 USP17L5A8MUK1 530 aa17.23■□□□□ 0.35
LINC00163-202ENST00000439088 SNHG28P0DPA3 235 aa17.23■□□□□ 0.35
LINC00163-202ENST00000439088 PDHBP11177 359 aa17.23■□□□□ 0.35
LINC00163-202ENST00000439088 PFKFB1P16118 471 aa17.23■□□□□ 0.35
LINC00163-202ENST00000439088 EARS2Q5JPH6 523 aaKnown RBP17.23■□□□□ 0.35
LINC00163-202ENST00000439088 RESP18Q5W5W9 173 aa17.23■□□□□ 0.35
LINC00163-202ENST00000439088 GALNT17Q6IS24 598 aa17.23■□□□□ 0.35
LINC00163-202ENST00000439088 TATDN1Q6P1N9 297 aa17.23■□□□□ 0.35
LINC00163-202ENST00000439088 SHC4Q6S5L8 630 aa17.23■□□□□ 0.35
LINC00163-202ENST00000439088 MRVI1Q9Y6F6 885 aa17.23■□□□□ 0.35
LINC00163-202ENST00000439088 ATRNL1Q5VV63 1379 aa17.23■□□□□ 0.35
LINC00163-202ENST00000439088 SPDYE2BA6NHP3 402 aa17.22■□□□□ 0.35
LINC00163-202ENST00000439088 ZNF202O95125 648 aa17.22■□□□□ 0.35
LINC00163-202ENST00000439088 SPDYE6P0CI01 402 aa17.22■□□□□ 0.35
LINC00163-202ENST00000439088 PTPREP23469 700 aa17.22■□□□□ 0.35
LINC00163-202ENST00000439088 CERKLQ49MI3 558 aaPredicted RBP17.22■□□□□ 0.35
LINC00163-202ENST00000439088 ASPRV1Q53RT3 343 aa17.22■□□□□ 0.35
LINC00163-202ENST00000439088 AGBL3Q8NEM8 1001 aa17.22■□□□□ 0.35
LINC00163-202ENST00000439088 CCDC148Q8NFR7 591 aa17.22■□□□□ 0.35
LINC00163-202ENST00000439088 SDF4Q9BRK5 362 aa17.22■□□□□ 0.35
LINC00163-202ENST00000439088 TRIM34Q9BYJ4 488 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms