RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 NDUFA10O95299 355 aa15.08■□□□□ 0
ACTN1-204ENST00000438964 CCDC57Q2TAC2 916 aa15.08■□□□□ 0
ACTN1-204ENST00000438964 CD248Q9HCU0 757 aa15.08■□□□□ 0
ACTN1-204ENST00000438964 DMGDHQ9UI17 866 aaKnown RBP15.08■□□□□ 0
ACTN1-204ENST00000438964 MRC1P22897 1456 aa15.08■□□□□ 0
ACTN1-204ENST00000438964 SLIT1O75093 1534 aa15.08■□□□□ 0
ACTN1-204ENST00000438964 RFX7Q2KHR2 1363 aa15.08■□□□□ 0
ACTN1-204ENST00000438964 SRCAPQ6ZRS2 3230 aa15.08■□□□□ 0
ACTN1-204ENST00000438964 CSB-PGBD3P0DP91 1061 aa15.08■□□□□ 0
ACTN1-204ENST00000438964 APBA1Q02410 837 aa15.08■□□□□ 0
ACTN1-204ENST00000438964 KRT26Q7Z3Y9 468 aa15.08■□□□□ 0
ACTN1-204ENST00000438964 PIH1D3Q9NQM4 214 aaKnown RBP15.08■□□□□ 0
ACTN1-204ENST00000438964 CWC25Q9NXE8 425 aaPredicted RBP15.08■□□□□ 0
ACTN1-204ENST00000438964 ZNF532Q9HCE3 1301 aa15.08■□□□□ 0
ACTN1-204ENST00000438964 SSBP05455 408 aaKnown RBP eCLIP15.07■□□□□ 0
ACTN1-204ENST00000438964 CYP26C1Q6V0L0 522 aa15.07■□□□□ 0
ACTN1-204ENST00000438964 SHISA4Q96DD7 197 aa15.07■□□□□ 0
ACTN1-204ENST00000438964 CAPS2Q9BXY5 557 aa15.07■□□□□ 0
ACTN1-204ENST00000438964 YY1AP1Q9H869 796 aa15.07■□□□□ 0
ACTN1-204ENST00000438964 FAM237AA0A1B0GTK4 181 aa15.07■□□□□ 0
ACTN1-204ENST00000438964 HERVK_113P62684 666 aa15.07■□□□□ 0
ACTN1-204ENST00000438964 TRAPPC11Q7Z392 1133 aa15.07■□□□□ 0
ACTN1-204ENST00000438964 ANKRD13CQ8N6S4 541 aa15.07■□□□□ 0
ACTN1-204ENST00000438964 CXorf56Q9H5V9 222 aa15.07■□□□□ 0
ACTN1-204ENST00000438964 BRMS1Q9HCU9 246 aa15.07■□□□□ 0
ACTN1-204ENST00000438964 ESYT3A0FGR9 886 aa15.06■□□□□ 0
ACTN1-204ENST00000438964 BACH1O14867 736 aa15.06■□□□□ 0
ACTN1-204ENST00000438964 KRT14P02533 472 aa15.06■□□□□ 0
ACTN1-204ENST00000438964 INPP5BP32019 993 aa15.06■□□□□ 0
ACTN1-204ENST00000438964 COPB1P53618 953 aaKnown RBP15.06■□□□□ 0
ACTN1-204ENST00000438964 CDKAL1Q5VV42 579 aa15.06■□□□□ 0
ACTN1-204ENST00000438964 TMTC1Q8IUR5 882 aa15.06■□□□□ 0
ACTN1-204ENST00000438964 DDX17Q92841 729 aaKnown RBP15.06■□□□□ 0
ACTN1-204ENST00000438964 LRRC1Q9BTT6 524 aa15.06■□□□□ 0
ACTN1-204ENST00000438964 AGPAT5Q9NUQ2 364 aa15.06■□□□□ 0
ACTN1-204ENST00000438964 KCNJ18B7U540 433 aa15.06■□□□□ 0
ACTN1-204ENST00000438964 NKRFO15226 690 aaKnown RBP eCLIP15.06■□□□□ 01e-6■■□□□ 13.9
ACTN1-204ENST00000438964 IDEP14735 1019 aa15.06■□□□□ 0
ACTN1-204ENST00000438964 RNASE9P60153 205 aaKnown RBP15.06■□□□□ 0
ACTN1-204ENST00000438964 KCNJ12Q14500 433 aa15.06■□□□□ 0
ACTN1-204ENST00000438964 NT5DC1Q5TFE4 455 aa15.06■□□□□ 0
ACTN1-204ENST00000438964 PCMTD1Q96MG8 357 aaPredicted RBP15.06■□□□□ 0
ACTN1-204ENST00000438964 NAA15Q9BXJ9 866 aaKnown RBP15.06■□□□□ 0
ACTN1-204ENST00000438964 ARMT1Q9H993 441 aa15.06■□□□□ 0
ACTN1-204ENST00000438964 MAP2K2P36507 400 aa15.06■□□□□ 0
ACTN1-204ENST00000438964 CHRNA2Q15822 529 aa15.06■□□□□ 0
ACTN1-204ENST00000438964 WDR93Q6P2C0 686 aa15.06■□□□□ 0
ACTN1-204ENST00000438964 ANKRD18AQ8IVF6 992 aa15.06■□□□□ 0
ACTN1-204ENST00000438964 TSEN2Q8NCE0 465 aaKnown RBP15.06■□□□□ 0
ACTN1-204ENST00000438964 ZSCAN5CA6NGD5 496 aaPredicted RBP15.05■□□□□ 0
ACTN1-204ENST00000438964 H7C1W4 665 aa15.05■□□□□ 0
ACTN1-204ENST00000438964 NDUFAB1O14561 156 aa15.05■□□□□ 0
ACTN1-204ENST00000438964 ATP2C2O75185 946 aa15.05■□□□□ 0
ACTN1-204ENST00000438964 PLEKP08567 350 aaPredicted RBP15.05■□□□□ 0
ACTN1-204ENST00000438964 GPTP24298 496 aa15.05■□□□□ 0
ACTN1-204ENST00000438964 ERCC5P28715 1186 aaPredicted RBP15.05■□□□□ 0
ACTN1-204ENST00000438964 RNF187Q5TA31 235 aaPredicted RBP15.05■□□□□ 0
ACTN1-204ENST00000438964 ANKRD20A12PQ8NF67 263 aa15.05■□□□□ 0
ACTN1-204ENST00000438964 CABLES1Q8TDN4 633 aa15.05■□□□□ 0
ACTN1-204ENST00000438964 FRMD3A2A2Y4 597 aa15.05■□□□□ -0
ACTN1-204ENST00000438964 EIF5P55010 431 aaKnown RBP15.05■□□□□ -0
ACTN1-204ENST00000438964 TCIRG1Q13488 830 aa15.05■□□□□ -0
ACTN1-204ENST00000438964 RTN1Q16799 776 aa15.05■□□□□ -0
ACTN1-204ENST00000438964 METTL24Q5JXM2 366 aa15.05■□□□□ -0
ACTN1-204ENST00000438964 KIRREL3Q8IZU9 778 aa15.05■□□□□ -0
ACTN1-204ENST00000438964 MIGA1Q8NAN2 632 aa15.05■□□□□ -0
ACTN1-204ENST00000438964 PLBD2Q8NHP8 589 aa15.05■□□□□ -0
ACTN1-204ENST00000438964 NELFBQ8WX92 580 aa15.05■□□□□ -0
ACTN1-204ENST00000438964 STRN4Q9NRL3 753 aa15.05■□□□□ -0
ACTN1-204ENST00000438964 SRPRBQ9Y5M8 271 aaKnown RBP15.05■□□□□ -0
ACTN1-204ENST00000438964 FAM170AA1A519 330 aa15.04■□□□□ -0
ACTN1-204ENST00000438964 ADAMTS3O15072 1205 aa15.04■□□□□ -0
ACTN1-204ENST00000438964 NCK2O43639 380 aa15.04■□□□□ -0
ACTN1-204ENST00000438964 PMS1P54277 932 aaKnown RBP15.04■□□□□ -0
ACTN1-204ENST00000438964 GUCY1A3Q02108 690 aa15.04■□□□□ -0
ACTN1-204ENST00000438964 TRIM22Q8IYM9 498 aa15.04■□□□□ -0
ACTN1-204ENST00000438964 IQSEC3Q9UPP2 1182 aaPredicted RBP15.04■□□□□ -0
ACTN1-204ENST00000438964 MYH13Q9UKX3 1938 aa15.04■□□□□ -0
ACTN1-204ENST00000438964 AFDNP55196 1824 aaKnown RBP15.04■□□□□ -0
ACTN1-204ENST00000438964 PLEKHG1Q9ULL1 1385 aa15.04■□□□□ -0
ACTN1-204ENST00000438964 MYO1BO43795 1136 aa15.04■□□□□ -0
ACTN1-204ENST00000438964 SEC24CP53992 1094 aa15.04■□□□□ -0
ACTN1-204ENST00000438964 ACTN3Q08043 901 aaPredicted RBP15.04■□□□□ -0
ACTN1-204ENST00000438964 CCNI2Q6ZMN8 369 aaPredicted RBP15.04■□□□□ -0
ACTN1-204ENST00000438964 MYH10P35580 1976 aa15.04■□□□□ -0
ACTN1-204ENST00000438964 PDE6BP35913 854 aa15.03■□□□□ -0
ACTN1-204ENST00000438964 AARSP49588 968 aaKnown RBP eCLIP15.03■□□□□ -0
ACTN1-204ENST00000438964 TTF1Q15361 905 aaPredicted RBP15.03■□□□□ -0
ACTN1-204ENST00000438964 RILPL1Q5EBL4 403 aa15.03■□□□□ -0
ACTN1-204ENST00000438964 TEX2Q8IWB9 1127 aa15.03■□□□□ -0
ACTN1-204ENST00000438964 PROCA1Q8NCQ7 364 aaPredicted RBP15.03■□□□□ -0
ACTN1-204ENST00000438964 NAPBQ9H115 298 aa15.03■□□□□ -0
ACTN1-204ENST00000438964 MLXIPQ9HAP2 919 aa15.03■□□□□ -0
ACTN1-204ENST00000438964 EPB41L4AQ9HCS5 686 aaPredicted RBP15.03■□□□□ -0
ACTN1-204ENST00000438964 C5P01031 1676 aa15.03■□□□□ -0
ACTN1-204ENST00000438964 GRIN2DO15399 1336 aa15.03■□□□□ -0
ACTN1-204ENST00000438964 XDHP47989 1333 aa15.03■□□□□ -0
ACTN1-204ENST00000438964 SHTN1A0MZ66 631 aa15.03■□□□□ -0
ACTN1-204ENST00000438964 FMNL1O95466 1100 aaPredicted RBP15.03■□□□□ -0
ACTN1-204ENST00000438964 PHKA1P46020 1223 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms