RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.93■□□□□ 0.14
PTCHD3-201ENST00000438700 TTF2Q9UNY4 1162 aaKnown RBP15.93■□□□□ 0.14
PTCHD3-201ENST00000438700 SUGT1Q9Y2Z0 365 aa15.93■□□□□ 0.14
PTCHD3-201ENST00000438700 V9GYY5 206 aaPredicted RBP15.93■□□□□ 0.14
PTCHD3-201ENST00000438700 USP27XA6NNY8 438 aa15.92■□□□□ 0.14
PTCHD3-201ENST00000438700 NMT2O60551 498 aa15.92■□□□□ 0.14
PTCHD3-201ENST00000438700 PPP6R2O75170 966 aa15.92■□□□□ 0.14
PTCHD3-201ENST00000438700 CDC25BP30305 580 aa15.92■□□□□ 0.14
PTCHD3-201ENST00000438700 IFIT1BQ5T764 474 aaKnown RBP15.92■□□□□ 0.14
PTCHD3-201ENST00000438700 CRACR2BQ8N4Y2 399 aaPredicted RBP15.92■□□□□ 0.14
PTCHD3-201ENST00000438700 WASF1Q92558 559 aa15.92■□□□□ 0.14
PTCHD3-201ENST00000438700 MRFAP1L1Q96HT8 127 aa15.92■□□□□ 0.14
PTCHD3-201ENST00000438700 KCNQ5Q9NR82 932 aa15.92■□□□□ 0.14
PTCHD3-201ENST00000438700 SCN9AQ15858 1988 aa15.92■□□□□ 0.14
PTCHD3-201ENST00000438700 ROBO3Q96MS0 1386 aa15.92■□□□□ 0.14
PTCHD3-201ENST00000438700 FOCADQ5VW36 1801 aa15.92■□□□□ 0.14
PTCHD3-201ENST00000438700 MYH1P12882 1939 aa15.92■□□□□ 0.14
PTCHD3-201ENST00000438700 hCG_1642624A0A1W2PR95 340 aa15.92■□□□□ 0.14
PTCHD3-201ENST00000438700 ATP2B1P20020 1258 aa15.92■□□□□ 0.14
PTCHD3-201ENST00000438700 SAFBQ15424 915 aaKnown RBP eCLIP15.92■□□□□ 0.14
PTCHD3-201ENST00000438700 RGS22Q8NE09 1264 aa15.92■□□□□ 0.14
PTCHD3-201ENST00000438700 FLT1P17948 1338 aa15.91■□□□□ 0.14
PTCHD3-201ENST00000438700 TSPY2A6NKD2 308 aa15.91■□□□□ 0.14
PTCHD3-201ENST00000438700 KIF20AO95235 890 aa15.91■□□□□ 0.14
PTCHD3-201ENST00000438700 PLCD1P51178 756 aa15.91■□□□□ 0.14
PTCHD3-201ENST00000438700 PODNQ7Z5L7 613 aa15.91■□□□□ 0.14
PTCHD3-201ENST00000438700 SNED1Q8TER0 1413 aa15.91■□□□□ 0.14
PTCHD3-201ENST00000438700 CCDC196A0A1B0GTZ2 297 aa15.91■□□□□ 0.14
PTCHD3-201ENST00000438700 DEXIO95424 95 aa15.91■□□□□ 0.14
PTCHD3-201ENST00000438700 TOB1P50616 345 aaPredicted RBP15.91■□□□□ 0.14
PTCHD3-201ENST00000438700 SCNN1DP51172 638 aa15.91■□□□□ 0.14
PTCHD3-201ENST00000438700 RCAN1P53805 252 aa15.91■□□□□ 0.14
PTCHD3-201ENST00000438700 PNOCQ13519 176 aa15.91■□□□□ 0.14
PTCHD3-201ENST00000438700 OXER1Q8TDS5 423 aa15.91■□□□□ 0.14
PTCHD3-201ENST00000438700 HPSEQ9Y251 543 aa15.91■□□□□ 0.14
PTCHD3-201ENST00000438700 C21orf2O43822 256 aa15.9■□□□□ 0.14
PTCHD3-201ENST00000438700 ECE2O60344 883 aa15.9■□□□□ 0.14
PTCHD3-201ENST00000438700 AOC3Q16853 763 aa15.9■□□□□ 0.14
PTCHD3-201ENST00000438700 RESP18Q5W5W9 173 aa15.9■□□□□ 0.14
PTCHD3-201ENST00000438700 SLC44A5Q8NCS7 719 aa15.9■□□□□ 0.14
PTCHD3-201ENST00000438700 MYH6P13533 1939 aa15.9■□□□□ 0.14
PTCHD3-201ENST00000438700 NLRP12P59046 1061 aa15.9■□□□□ 0.14
PTCHD3-201ENST00000438700 GRIN1Q05586 938 aa15.9■□□□□ 0.14
PTCHD3-201ENST00000438700 TPD52L1Q16890 204 aaPredicted RBP15.9■□□□□ 0.14
PTCHD3-201ENST00000438700 CATIPQ7Z7H3 387 aa15.9■□□□□ 0.14
PTCHD3-201ENST00000438700 LRRC8AQ8IWT6 810 aa15.9■□□□□ 0.14
PTCHD3-201ENST00000438700 SLC16A10Q8TF71 515 aa15.9■□□□□ 0.14
PTCHD3-201ENST00000438700 BAZ2BQ9UIF8 2168 aaKnown RBP15.9■□□□□ 0.14
PTCHD3-201ENST00000438700 SMTNL1A8MU46 457 aa15.89■□□□□ 0.13
PTCHD3-201ENST00000438700 MKNK2Q9HBH9 465 aa15.89■□□□□ 0.13
PTCHD3-201ENST00000438700 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.89■□□□□ 0.13
PTCHD3-201ENST00000438700 ZNF646O15015 1829 aaPredicted RBP15.89■□□□□ 0.13
PTCHD3-201ENST00000438700 SMC2O95347 1197 aa15.89■□□□□ 0.13
PTCHD3-201ENST00000438700 TFAP4Q01664 338 aa15.89■□□□□ 0.13
PTCHD3-201ENST00000438700 LONRF3Q496Y0 759 aa15.89■□□□□ 0.13
PTCHD3-201ENST00000438700 ZNF771Q7L3S4 317 aaPredicted RBP15.89■□□□□ 0.13
PTCHD3-201ENST00000438700 KRI1Q8N9T8 703 aaKnown RBP15.89■□□□□ 0.13
PTCHD3-201ENST00000438700 OGFRQ9NZT2 677 aa15.89■□□□□ 0.13
PTCHD3-201ENST00000438700 VPS54Q9P1Q0 977 aa15.89■□□□□ 0.13
PTCHD3-201ENST00000438700 KCNH3Q9ULD8 1083 aa15.89■□□□□ 0.13
PTCHD3-201ENST00000438700 PCDHB6Q9Y5E3 794 aa15.89■□□□□ 0.13
PTCHD3-201ENST00000438700 CUTAO60888 179 aa15.88■□□□□ 0.13
PTCHD3-201ENST00000438700 CC2D2BQ6DHV5 1058 aa15.88■□□□□ 0.13
PTCHD3-201ENST00000438700 PLEKHA8P1O95397 391 aa15.88■□□□□ 0.13
PTCHD3-201ENST00000438700 LMOD1P29536 600 aaPredicted RBP15.88■□□□□ 0.13
PTCHD3-201ENST00000438700 PICALMQ13492 652 aa15.88■□□□□ 0.13
PTCHD3-201ENST00000438700 METTL16Q86W50 562 aaKnown RBP15.88■□□□□ 0.13
PTCHD3-201ENST00000438700 TTLL6Q8N841 843 aa15.88■□□□□ 0.13
PTCHD3-201ENST00000438700 CNNM3Q8NE01 707 aa15.88■□□□□ 0.13
PTCHD3-201ENST00000438700 CCDC112Q8NEF3 446 aa15.88■□□□□ 0.13
PTCHD3-201ENST00000438700 SHISA4Q96DD7 197 aa15.88■□□□□ 0.13
PTCHD3-201ENST00000438700 TIGD1Q96MW7 591 aa15.88■□□□□ 0.13
PTCHD3-201ENST00000438700 FOXP1Q9H334 677 aaPredicted RBP15.88■□□□□ 0.13
PTCHD3-201ENST00000438700 CABP5Q9NP86 173 aa15.88■□□□□ 0.13
PTCHD3-201ENST00000438700 IFNKQ9P0W0 207 aa15.88■□□□□ 0.13
PTCHD3-201ENST00000438700 FAM205CA6NFA0 338 aa15.87■□□□□ 0.13
PTCHD3-201ENST00000438700 FOXN1O15353 648 aa15.87■□□□□ 0.13
PTCHD3-201ENST00000438700 DPEP1P16444 411 aa15.87■□□□□ 0.13
PTCHD3-201ENST00000438700 AKAP17AQ02040 695 aaKnown RBP15.87■□□□□ 0.13
PTCHD3-201ENST00000438700 TROAPQ12815 778 aa15.87■□□□□ 0.13
PTCHD3-201ENST00000438700 STRIP1Q5VSL9 837 aa15.87■□□□□ 0.13
PTCHD3-201ENST00000438700 KIAA0825Q8IV33 1275 aa15.87■□□□□ 0.13
PTCHD3-201ENST00000438700 TEKT1Q969V4 418 aa15.87■□□□□ 0.13
PTCHD3-201ENST00000438700 FEZ1Q99689 392 aa15.87■□□□□ 0.13
PTCHD3-201ENST00000438700 XPO4Q9C0E2 1151 aaKnown RBP15.87■□□□□ 0.13
PTCHD3-201ENST00000438700 DDAH1O94760 285 aa15.87■□□□□ 0.13
PTCHD3-201ENST00000438700 ZBTB7AO95365 584 aa15.87■□□□□ 0.13
PTCHD3-201ENST00000438700 DACT2Q5SW24 774 aa15.87■□□□□ 0.13
PTCHD3-201ENST00000438700 RCSD1Q6JBY9 416 aa15.87■□□□□ 0.13
PTCHD3-201ENST00000438700 BPIFA3Q9BQP9 254 aa15.87■□□□□ 0.13
PTCHD3-201ENST00000438700 IL17RBQ9NRM6 502 aa15.87■□□□□ 0.13
PTCHD3-201ENST00000438700 KIF13BQ9NQT8 1826 aa15.86■□□□□ 0.13
PTCHD3-201ENST00000438700 RASA1P20936 1047 aa15.86■□□□□ 0.13
PTCHD3-201ENST00000438700 NCAPHQ15003 741 aa15.86■□□□□ 0.13
PTCHD3-201ENST00000438700 RILPL1Q5EBL4 403 aa15.86■□□□□ 0.13
PTCHD3-201ENST00000438700 HHIPL2Q6UWX4 724 aa15.86■□□□□ 0.13
PTCHD3-201ENST00000438700 KRBA2Q6ZNG9 492 aa15.86■□□□□ 0.13
PTCHD3-201ENST00000438700 ZNF444Q8N0Y2 327 aaPredicted RBP15.86■□□□□ 0.13
PTCHD3-201ENST00000438700 USP40Q9NVE5 1235 aa15.86■□□□□ 0.13
PTCHD3-201ENST00000438700 TRMT1Q9NXH9 659 aaKnown RBP15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms