RNA–Protein interactions for RNA: ENST00000437425.6

SGCE-205, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-205ENST00000437425 PARP1P09874 1014 aaKnown RBP17.7■□□□□ 0.42
SGCE-205ENST00000437425 LIG1P18858 919 aa17.7■□□□□ 0.42
SGCE-205ENST00000437425 FAM160A1Q05DH4 1040 aa17.7■□□□□ 0.42
SGCE-205ENST00000437425 CCAR1Q8IX12 1150 aaKnown RBP17.7■□□□□ 0.42
SGCE-205ENST00000437425 CMTR1Q8N1G2 835 aaKnown RBP17.7■□□□□ 0.42
SGCE-205ENST00000437425 CCDC148Q8NFR7 591 aa17.7■□□□□ 0.42
SGCE-205ENST00000437425 MRPS27Q92552 414 aaKnown RBP17.7■□□□□ 0.42
SGCE-205ENST00000437425 CEP95Q96GE4 821 aa17.7■□□□□ 0.42
SGCE-205ENST00000437425 TNMDQ9H2S6 317 aa17.7■□□□□ 0.42
SGCE-205ENST00000437425 MAD2L2Q9UI95 211 aa17.7■□□□□ 0.42
SGCE-205ENST00000437425 CLIC4Q9Y696 253 aa17.7■□□□□ 0.42
SGCE-205ENST00000437425 ATRNL1Q5VV63 1379 aa17.7■□□□□ 0.42
SGCE-205ENST00000437425 BTBD18B2RXH4 712 aa17.69■□□□□ 0.42
SGCE-205ENST00000437425 CCDC192P0DO97 292 aa17.69■□□□□ 0.42
SGCE-205ENST00000437425 ASPRV1Q53RT3 343 aa17.69■□□□□ 0.42
SGCE-205ENST00000437425 FKBP1CQ5VVH2 108 aa17.69■□□□□ 0.42
SGCE-205ENST00000437425 RBM43Q6ZSC3 357 aaKnown RBP17.69■□□□□ 0.42
SGCE-205ENST00000437425 METTL16Q86W50 562 aaKnown RBP17.69■□□□□ 0.42
SGCE-205ENST00000437425 MTMR14Q8NCE2 650 aa17.69■□□□□ 0.42
SGCE-205ENST00000437425 CCDC12Q8WUD4 166 aaPredicted RBP17.69■□□□□ 0.42
SGCE-205ENST00000437425 TAOK3Q9H2K8 898 aa17.69■□□□□ 0.42
SGCE-205ENST00000437425 NOL7Q9UMY1 257 aaKnown RBP17.69■□□□□ 0.42
SGCE-205ENST00000437425 PCDHA7Q9UN72 937 aa17.69■□□□□ 0.42
SGCE-205ENST00000437425 hCG_1984214I3L0E3 225 aa17.68■□□□□ 0.42
SGCE-205ENST00000437425 KINO60870 393 aaKnown RBP17.68■□□□□ 0.42
SGCE-205ENST00000437425 CAVIN2O95810 425 aa17.68■□□□□ 0.42
SGCE-205ENST00000437425 CMA1P23946 247 aa17.68■□□□□ 0.42
SGCE-205ENST00000437425 SHMT1P34896 483 aa17.68■□□□□ 0.42
SGCE-205ENST00000437425 TRAPPC10P48553 1259 aa17.68■□□□□ 0.42
SGCE-205ENST00000437425 NFIAQ12857 509 aa17.68■□□□□ 0.42
SGCE-205ENST00000437425 R3HDM1Q15032 1099 aaKnown RBP17.68■□□□□ 0.42
SGCE-205ENST00000437425 UVSSAQ2YD98 709 aa17.68■□□□□ 0.42
SGCE-205ENST00000437425 ZNF713Q8N859 430 aaPredicted RBP17.68■□□□□ 0.42
SGCE-205ENST00000437425 JDP2Q8WYK2 163 aa17.68■□□□□ 0.42
SGCE-205ENST00000437425 GMLQ99445 158 aa17.68■□□□□ 0.42
SGCE-205ENST00000437425 ZNF277Q9NRM2 450 aaPredicted RBP17.68■□□□□ 0.42
SGCE-205ENST00000437425 FAM198AQ9UFP1 575 aa17.68■□□□□ 0.42
SGCE-205ENST00000437425 KCNJ14Q9UNX9 436 aa17.68■□□□□ 0.42
SGCE-205ENST00000437425 LTBP3Q9NS15 1303 aa17.68■□□□□ 0.42
SGCE-205ENST00000437425 DLGAP5Q15398 846 aa17.67■□□□□ 0.42
SGCE-205ENST00000437425 FTOQ9C0B1 505 aaKnown RBP eCLIP17.67■□□□□ 0.42
SGCE-205ENST00000437425 VPS54Q9P1Q0 977 aa17.67■□□□□ 0.42
SGCE-205ENST00000437425 ATF5Q9Y2D1 282 aaPredicted RBP17.67■□□□□ 0.42
SGCE-205ENST00000437425 MYH8P13535 1937 aa17.67■□□□□ 0.42
SGCE-205ENST00000437425 SPDYE2BA6NHP3 402 aa17.67■□□□□ 0.42
SGCE-205ENST00000437425 KLRF2D3W0D1 207 aa17.67■□□□□ 0.42
SGCE-205ENST00000437425 PSMD14O00487 310 aa17.67■□□□□ 0.42
SGCE-205ENST00000437425 CUTAO60888 179 aa17.67■□□□□ 0.42
SGCE-205ENST00000437425 NR1I2O75469 434 aa17.67■□□□□ 0.42
SGCE-205ENST00000437425 SPDYE6P0CI01 402 aa17.67■□□□□ 0.42
SGCE-205ENST00000437425 NLRP5P59047 1200 aa17.67■□□□□ 0.42
SGCE-205ENST00000437425 TNIP1Q15025 636 aa17.67■□□□□ 0.42
SGCE-205ENST00000437425 ZSCAN29Q8IWY8 852 aaPredicted RBP17.67■□□□□ 0.42
SGCE-205ENST00000437425 FSIP1Q8NA03 581 aa17.67■□□□□ 0.42
SGCE-205ENST00000437425 HERC5Q9UII4 1024 aaKnown RBP17.67■□□□□ 0.42
SGCE-205ENST00000437425 UBE2Q2LH0YL09 131 aa17.66■□□□□ 0.42
SGCE-205ENST00000437425 AKR1B1P15121 316 aa17.66■□□□□ 0.42
SGCE-205ENST00000437425 PTPAQ15257 358 aa17.66■□□□□ 0.42
SGCE-205ENST00000437425 TATDN1Q6P1N9 297 aa17.66■□□□□ 0.42
SGCE-205ENST00000437425 RBSNQ9H1K0 784 aa17.66■□□□□ 0.42
SGCE-205ENST00000437425 SYNPO2Q9UMS6 1093 aa17.66■□□□□ 0.42
SGCE-205ENST00000437425 ADAMTSL1Q8N6G6 1762 aa17.66■□□□□ 0.42
SGCE-205ENST00000437425 MYO1BO43795 1136 aa17.65■□□□□ 0.42
SGCE-205ENST00000437425 RAD17O75943 681 aa17.65■□□□□ 0.42
SGCE-205ENST00000437425 SNHG28P0DPA3 235 aa17.65■□□□□ 0.42
SGCE-205ENST00000437425 RPS12P25398 132 aaKnown RBP17.65■□□□□ 0.42
SGCE-205ENST00000437425 CERKLQ49MI3 558 aaPredicted RBP17.65■□□□□ 0.42
SGCE-205ENST00000437425 TPRNQ4KMQ1 711 aa17.65■□□□□ 0.42
SGCE-205ENST00000437425 GPATCH4Q5T3I0 446 aaKnown RBP17.65■□□□□ 0.42
SGCE-205ENST00000437425 DAGLBQ8NCG7 672 aa17.65■□□□□ 0.42
SGCE-205ENST00000437425 ENGASEQ8NFI3 743 aa17.65■□□□□ 0.42
SGCE-205ENST00000437425 RRP36Q96EU6 259 aaKnown RBP17.65■□□□□ 0.42
SGCE-205ENST00000437425 SGIP1Q9BQI5 828 aa17.65■□□□□ 0.42
SGCE-205ENST00000437425 FUCA2Q9BTY2 467 aa17.65■□□□□ 0.42
SGCE-205ENST00000437425 TDRD3Q9H7E2 651 aaKnown RBP17.65■□□□□ 0.42
SGCE-205ENST00000437425 KANSL2Q9H9L4 492 aa17.65■□□□□ 0.42
SGCE-205ENST00000437425 NYAP2Q9P242 653 aa17.65■□□□□ 0.42
SGCE-205ENST00000437425 SEC63Q9UGP8 760 aaKnown RBP17.65■□□□□ 0.42
SGCE-205ENST00000437425 BRCA1P38398 1863 aaKnown RBP17.65■□□□□ 0.42
SGCE-205ENST00000437425 FAM237AA0A1B0GTK4 181 aa17.64■□□□□ 0.41
SGCE-205ENST00000437425 TRIM75PA6NK02 468 aa17.64■□□□□ 0.41
SGCE-205ENST00000437425 CCDC173Q0VFZ6 552 aa17.64■□□□□ 0.41
SGCE-205ENST00000437425 CIAPIN1Q6FI81 312 aa17.64■□□□□ 0.41
SGCE-205ENST00000437425 TMEM179Q6ZVK1 233 aa17.64■□□□□ 0.41
SGCE-205ENST00000437425 STAG2Q8N3U4 1231 aa17.64■□□□□ 0.41
SGCE-205ENST00000437425 KRI1Q8N9T8 703 aaKnown RBP17.64■□□□□ 0.41
SGCE-205ENST00000437425 ZNF579Q8NAF0 562 aaKnown RBP17.64■□□□□ 0.41
SGCE-205ENST00000437425 MKL1Q969V6 931 aa17.64■□□□□ 0.41
SGCE-205ENST00000437425 PRMT6Q96LA8 375 aaPredicted RBP17.64■□□□□ 0.41
SGCE-205ENST00000437425 TIGD1Q96MW7 591 aa17.64■□□□□ 0.41
SGCE-205ENST00000437425 BARHL2Q9NY43 387 aa17.64■□□□□ 0.41
SGCE-205ENST00000437425 GREB1LQ9C091 1923 aaPredicted RBP17.64■□□□□ 0.41
SGCE-205ENST00000437425 FER1L6Q2WGJ9 1857 aa17.64■□□□□ 0.41
SGCE-205ENST00000437425 PDHBP11177 359 aa17.63■□□□□ 0.41
SGCE-205ENST00000437425 TCP10Q12799 353 aa17.63■□□□□ 0.41
SGCE-205ENST00000437425 SNW1Q13573 536 aaKnown RBP17.63■□□□□ 0.41
SGCE-205ENST00000437425 AXDND1Q5T1B0 1012 aaPredicted RBP17.63■□□□□ 0.41
SGCE-205ENST00000437425 SASS6Q6UVJ0 657 aa17.63■□□□□ 0.41
SGCE-205ENST00000437425 FMR1NBQ8N0W7 255 aaPredicted RBP17.63■□□□□ 0.41
SGCE-205ENST00000437425 FAM151AQ8WW52 585 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms