RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 SFMBT2Q5VUG0 894 aa17.58■□□□□ 0.41
PTPN13-204ENST00000436978 RHOXF2Q9BQY4 288 aa17.58■□□□□ 0.41
PTPN13-204ENST00000436978 PRDM15P57071 1507 aaPredicted RBP17.58■□□□□ 0.41
PTPN13-204ENST00000436978 MKRN1Q9UHC7 482 aaKnown RBP17.58■□□□□ 0.41
PTPN13-204ENST00000436978 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.58■□□□□ 0.4
PTPN13-204ENST00000436978 SEMA3EO15041 775 aa17.58■□□□□ 0.4
PTPN13-204ENST00000436978 PRDM1O75626 825 aa17.58■□□□□ 0.4
PTPN13-204ENST00000436978 PCCAP05165 728 aaPredicted RBP17.58■□□□□ 0.4
PTPN13-204ENST00000436978 XRCC6P12956 609 aaKnown RBP eCLIP17.58■□□□□ 0.4
PTPN13-204ENST00000436978 EAPPQ56P03 285 aaPredicted RBP17.58■□□□□ 0.4
PTPN13-204ENST00000436978 PLCB1Q9NQ66 1216 aa17.58■□□□□ 0.4
PTPN13-204ENST00000436978 GTF2IP78347 998 aa17.58■□□□□ 0.4
PTPN13-204ENST00000436978 MIER3Q7Z3K6 550 aa17.58■□□□□ 0.4
PTPN13-204ENST00000436978 C2CD5Q86YS7 1000 aa17.58■□□□□ 0.4
PTPN13-204ENST00000436978 TIGD1Q96MW7 591 aa17.58■□□□□ 0.4
PTPN13-204ENST00000436978 CPA1P15085 419 aa17.57■□□□□ 0.4
PTPN13-204ENST00000436978 DCPSQ96C86 337 aaKnown RBP17.57■□□□□ 0.4
PTPN13-204ENST00000436978 SMIM23A6NLE4 172 aa17.57■□□□□ 0.4
PTPN13-204ENST00000436978 FANCCQ00597 558 aa17.57■□□□□ 0.4
PTPN13-204ENST00000436978 GEN1Q17RS7 908 aa17.57■□□□□ 0.4
PTPN13-204ENST00000436978 ZNF654Q8IZM8 581 aa17.57■□□□□ 0.4
PTPN13-204ENST00000436978 PCDHB13Q9Y5F0 798 aa17.57■□□□□ 0.4
PTPN13-204ENST00000436978 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.57■□□□□ 0.4
PTPN13-204ENST00000436978 CIAO1O76071 339 aa17.57■□□□□ 0.4
PTPN13-204ENST00000436978 KRT40Q6A162 431 aa17.57■□□□□ 0.4
PTPN13-204ENST00000436978 PPANQ9NQ55 473 aaKnown RBP17.57■□□□□ 0.4
PTPN13-204ENST00000436978 POLR2MP0CAP2 368 aa17.57■□□□□ 0.4
PTPN13-204ENST00000436978 ATF7P17544 494 aaPredicted RBP17.57■□□□□ 0.4
PTPN13-204ENST00000436978 MAGI3Q5TCQ9 1506 aa17.57■□□□□ 0.4
PTPN13-204ENST00000436978 EBAG9O00559 213 aa17.57■□□□□ 0.4
PTPN13-204ENST00000436978 GABPAQ06546 454 aa17.57■□□□□ 0.4
PTPN13-204ENST00000436978 PSTPIP2Q9H939 334 aa17.57■□□□□ 0.4
PTPN13-204ENST00000436978 CERKLQ49MI3 558 aaPredicted RBP17.57■□□□□ 0.4
PTPN13-204ENST00000436978 RIOK1Q9BRS2 568 aaKnown RBP17.57■□□□□ 0.4
PTPN13-204ENST00000436978 XDHP47989 1333 aa17.57■□□□□ 0.4
PTPN13-204ENST00000436978 NSMFQ6X4W1 530 aa17.56■□□□□ 0.4
PTPN13-204ENST00000436978 VPS18Q9P253 973 aa17.56■□□□□ 0.4
PTPN13-204ENST00000436978 ZWINTO95229 277 aa17.56■□□□□ 0.4
PTPN13-204ENST00000436978 DMP1Q13316 513 aaPredicted RBP17.56■□□□□ 0.4
PTPN13-204ENST00000436978 ZBTB8OSQ8IWT0 167 aa17.56■□□□□ 0.4
PTPN13-204ENST00000436978 TPH2Q8IWU9 490 aa17.56■□□□□ 0.4
PTPN13-204ENST00000436978 DEPTORQ8TB45 409 aa17.56■□□□□ 0.4
PTPN13-204ENST00000436978 GIPC1O14908 333 aa17.56■□□□□ 0.4
PTPN13-204ENST00000436978 CAPN2P17655 700 aa17.56■□□□□ 0.4
PTPN13-204ENST00000436978 UAP1Q16222 522 aaPredicted RBP17.56■□□□□ 0.4
PTPN13-204ENST00000436978 MAEAQ7L5Y9 396 aa17.56■□□□□ 0.4
PTPN13-204ENST00000436978 ADCY9O60503 1353 aa17.56■□□□□ 0.4
PTPN13-204ENST00000436978 SERPINA10Q9UK55 444 aa17.56■□□□□ 0.4
PTPN13-204ENST00000436978 ATP2C2O75185 946 aa17.56■□□□□ 0.4
PTPN13-204ENST00000436978 PARP2Q9UGN5 583 aa17.56■□□□□ 0.4
PTPN13-204ENST00000436978 TRPC5Q9UL62 973 aaPredicted RBP17.56■□□□□ 0.4
PTPN13-204ENST00000436978 PALM3A6NDB9 673 aaPredicted RBP17.56■□□□□ 0.4
PTPN13-204ENST00000436978 CIB2O75838 187 aa17.56■□□□□ 0.4
PTPN13-204ENST00000436978 VPS54Q9P1Q0 977 aa17.56■□□□□ 0.4
PTPN13-204ENST00000436978 FEZ2Q9UHY8 353 aaPredicted RBP17.56■□□□□ 0.4
PTPN13-204ENST00000436978 CDK12Q9NYV4 1490 aaPredicted RBP17.56■□□□□ 0.4
PTPN13-204ENST00000436978 KRT19P08727 400 aa17.55■□□□□ 0.4
PTPN13-204ENST00000436978 ZNF772Q68DY9 489 aaPredicted RBP17.55■□□□□ 0.4
PTPN13-204ENST00000436978 CCDC89Q8N998 374 aa17.55■□□□□ 0.4
PTPN13-204ENST00000436978 GINS2Q9Y248 185 aa17.55■□□□□ 0.4
PTPN13-204ENST00000436978 VPS52Q8N1B4 723 aa17.55■□□□□ 0.4
PTPN13-204ENST00000436978 MIS12Q9H081 205 aa17.55■□□□□ 0.4
PTPN13-204ENST00000436978 STIM2Q9P246 746 aa17.55■□□□□ 0.4
PTPN13-204ENST00000436978 LGSNQ5TDP6 509 aa17.55■□□□□ 0.4
PTPN13-204ENST00000436978 XRCC5P13010 732 aaKnown RBP17.55■□□□□ 0.4
PTPN13-204ENST00000436978 CNGA1P29973 690 aa17.55■□□□□ 0.4
PTPN13-204ENST00000436978 BLIDQ8IZY5 108 aa17.55■□□□□ 0.4
PTPN13-204ENST00000436978 MAGEF1Q9HAY2 307 aa17.55■□□□□ 0.4
PTPN13-204ENST00000436978 DDX17Q92841 729 aaKnown RBP17.55■□□□□ 0.4
PTPN13-204ENST00000436978 DDX25Q9UHL0 483 aaKnown RBP17.55■□□□□ 0.4
PTPN13-204ENST00000436978 PPEF1O14829 653 aaPredicted RBP17.55■□□□□ 0.4
PTPN13-204ENST00000436978 IFNL3Q8IZI9 196 aa17.55■□□□□ 0.4
PTPN13-204ENST00000436978 GLG1Q92896 1179 aa17.55■□□□□ 0.4
PTPN13-204ENST00000436978 SPOUT1Q5T280 376 aaKnown RBP17.54■□□□□ 0.4
PTPN13-204ENST00000436978 INTS8Q75QN2 995 aaKnown RBP17.54■□□□□ 0.4
PTPN13-204ENST00000436978 DAAM2Q86T65 1068 aa17.54■□□□□ 0.4
PTPN13-204ENST00000436978 OTUD7AQ8TE49 926 aaPredicted RBP17.54■□□□□ 0.4
PTPN13-204ENST00000436978 RSPH14Q9UHP6 348 aa17.54■□□□□ 0.4
PTPN13-204ENST00000436978 ITSN1Q15811 1721 aa17.54■□□□□ 0.4
PTPN13-204ENST00000436978 PPP1R21Q6ZMI0 780 aa17.54■□□□□ 0.4
PTPN13-204ENST00000436978 TBC1D7Q9P0N9 293 aa17.54■□□□□ 0.4
PTPN13-204ENST00000436978 TRPM1Q7Z4N2 1603 aa17.54■□□□□ 0.4
PTPN13-204ENST00000436978 TNNI1P19237 187 aa17.54■□□□□ 0.4
PTPN13-204ENST00000436978 METTL13Q8N6R0 699 aa17.54■□□□□ 0.4
PTPN13-204ENST00000436978 ZMYND15Q9H091 742 aa17.54■□□□□ 0.4
PTPN13-204ENST00000436978 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.54■□□□□ 0.4
PTPN13-204ENST00000436978 LEMD3Q9Y2U8 911 aa17.54■□□□□ 0.4
PTPN13-204ENST00000436978 NLGN1Q8N2Q7 840 aa17.54■□□□□ 0.4
PTPN13-204ENST00000436978 MLXIPQ9HAP2 919 aa17.54■□□□□ 0.4
PTPN13-204ENST00000436978 ERVK-7P63135 1459 aa17.54■□□□□ 0.4
PTPN13-204ENST00000436978 NOL3O60936 208 aaKnown RBP17.54■□□□□ 0.4
PTPN13-204ENST00000436978 ABCD1P33897 745 aa17.54■□□□□ 0.4
PTPN13-204ENST00000436978 TPD52P55327 224 aaPredicted RBP17.54■□□□□ 0.4
PTPN13-204ENST00000436978 CFAP221Q4G0U5 840 aa17.54■□□□□ 0.4
PTPN13-204ENST00000436978 CDC37L1Q7L3B6 337 aa17.54■□□□□ 0.4
PTPN13-204ENST00000436978 CCDC51Q96ER9 411 aa17.54■□□□□ 0.4
PTPN13-204ENST00000436978 CTTNBP2NLQ9P2B4 639 aa17.54■□□□□ 0.4
PTPN13-204ENST00000436978 MAPK8IP1Q9UQF2 711 aa17.54■□□□□ 0.4
PTPN13-204ENST00000436978 MNAT1P51948 309 aa17.53■□□□□ 0.4
PTPN13-204ENST00000436978 FAM47AQ5JRC9 791 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms