RNA–Protein interactions for RNA: ENST00000435891.5

CLSTN1-203, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 3,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-203ENST00000435891 MTF1Q14872 753 aa11.85□□□□□ -0.51
CLSTN1-203ENST00000435891 ZNF397Q8NF99 534 aaPredicted RBP11.85□□□□□ -0.51
CLSTN1-203ENST00000435891 DESI2Q9BSY9 194 aa11.85□□□□□ -0.51
CLSTN1-203ENST00000435891 RSPH14Q9UHP6 348 aa11.85□□□□□ -0.51
CLSTN1-203ENST00000435891 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.85□□□□□ -0.51
CLSTN1-203ENST00000435891 PPP2R2CQ9Y2T4 447 aa11.85□□□□□ -0.51
CLSTN1-203ENST00000435891 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.85□□□□□ -0.512e-6■■■■■ 28
CLSTN1-203ENST00000435891 PTGDRQ13258 359 aa11.85□□□□□ -0.51
CLSTN1-203ENST00000435891 SPECC1LQ69YQ0 1117 aa11.85□□□□□ -0.51
CLSTN1-203ENST00000435891 CLEC4GQ6UXB4 293 aa11.85□□□□□ -0.51
CLSTN1-203ENST00000435891 AMIGO3Q86WK7 504 aa11.85□□□□□ -0.51
CLSTN1-203ENST00000435891 GPATCH11Q8N954 259 aa11.85□□□□□ -0.51
CLSTN1-203ENST00000435891 BAG1Q99933 345 aaPredicted RBP11.85□□□□□ -0.51
CLSTN1-203ENST00000435891 SPATA31A5Q5VU36 1347 aa11.85□□□□□ -0.51
CLSTN1-203ENST00000435891 SPATA31A7Q8IWB4 1347 aa11.85□□□□□ -0.51
CLSTN1-203ENST00000435891 PLCD1P51178 756 aa11.84□□□□□ -0.51
CLSTN1-203ENST00000435891 NR1I3Q14994 352 aa11.84□□□□□ -0.51
CLSTN1-203ENST00000435891 IL17AQ16552 155 aa11.84□□□□□ -0.51
CLSTN1-203ENST00000435891 SH3RF1Q7Z6J0 888 aa11.84□□□□□ -0.51
CLSTN1-203ENST00000435891 WDR24Q96S15 920 aa11.84□□□□□ -0.51
CLSTN1-203ENST00000435891 SCN7AQ01118 1682 aa11.84□□□□□ -0.51
CLSTN1-203ENST00000435891 CASZ1Q86V15 1759 aa11.84□□□□□ -0.51
CLSTN1-203ENST00000435891 A0A0U1RQJ8 604 aa11.84□□□□□ -0.51
CLSTN1-203ENST00000435891 ATRIPQ8WXE1 791 aa11.84□□□□□ -0.51
CLSTN1-203ENST00000435891 BLZF1Q9H2G9 400 aa11.84□□□□□ -0.51
CLSTN1-203ENST00000435891 THRAP3Q9Y2W1 955 aaKnown RBP11.84□□□□□ -0.51
CLSTN1-203ENST00000435891 ARHGAP6O43182 974 aa11.84□□□□□ -0.51
CLSTN1-203ENST00000435891 XBP1P17861 261 aa11.84□□□□□ -0.51
CLSTN1-203ENST00000435891 CDC25AP30304 524 aa11.84□□□□□ -0.51
CLSTN1-203ENST00000435891 CUL4BQ13620 913 aa11.84□□□□□ -0.51
CLSTN1-203ENST00000435891 TTC38Q5R3I4 469 aa11.84□□□□□ -0.51
CLSTN1-203ENST00000435891 PIK3AP1Q6ZUJ8 805 aa11.84□□□□□ -0.51
CLSTN1-203ENST00000435891 TRIML1Q8N9V2 468 aa11.84□□□□□ -0.51
CLSTN1-203ENST00000435891 MTRQ99707 1265 aa11.84□□□□□ -0.51
CLSTN1-203ENST00000435891 COL22A1Q8NFW1 1626 aaPredicted RBP11.83□□□□□ -0.51
CLSTN1-203ENST00000435891 URI1O94763 535 aaPredicted RBP11.83□□□□□ -0.52
CLSTN1-203ENST00000435891 CAPN2P17655 700 aa11.83□□□□□ -0.52
CLSTN1-203ENST00000435891 GTF2A1P52655 376 aaPredicted RBP11.83□□□□□ -0.52
CLSTN1-203ENST00000435891 RPS8P62241 208 aaKnown RBP11.83□□□□□ -0.52
CLSTN1-203ENST00000435891 PPP2R5BQ15173 497 aa11.83□□□□□ -0.52
CLSTN1-203ENST00000435891 C10orf67Q8IYJ2 551 aa11.83□□□□□ -0.52
CLSTN1-203ENST00000435891 EPC1Q9H2F5 836 aa11.83□□□□□ -0.52
CLSTN1-203ENST00000435891 PARP3Q9Y6F1 533 aa11.83□□□□□ -0.52
CLSTN1-203ENST00000435891 MYO1BO43795 1136 aa11.83□□□□□ -0.52
CLSTN1-203ENST00000435891 USP17L8P0C7I0 530 aa11.83□□□□□ -0.52
CLSTN1-203ENST00000435891 RCSD1Q6JBY9 416 aa11.83□□□□□ -0.52
CLSTN1-203ENST00000435891 IRX2Q9BZI1 471 aaPredicted RBP11.83□□□□□ -0.52
CLSTN1-203ENST00000435891 TSPYL1Q9H0U9 437 aa11.83□□□□□ -0.52
CLSTN1-203ENST00000435891 ST7Q9NRC1 585 aa11.83□□□□□ -0.52
CLSTN1-203ENST00000435891 GOLGB1Q14789 3259 aaKnown RBP11.83□□□□□ -0.52
CLSTN1-203ENST00000435891 XDHP47989 1333 aa11.83□□□□□ -0.52
CLSTN1-203ENST00000435891 NRAPQ86VF7 1730 aa11.83□□□□□ -0.52
CLSTN1-203ENST00000435891 A0A1B0GTH6 734 aa11.83□□□□□ -0.52
CLSTN1-203ENST00000435891 POLR3GO15318 223 aaPredicted RBP11.83□□□□□ -0.52
CLSTN1-203ENST00000435891 BRD2P25440 801 aaKnown RBP11.83□□□□□ -0.52
CLSTN1-203ENST00000435891 FAM98CQ17RN3 349 aaKnown RBP11.83□□□□□ -0.52
CLSTN1-203ENST00000435891 KANK3Q6NY19 840 aa11.83□□□□□ -0.52
CLSTN1-203ENST00000435891 RBM28Q9NW13 759 aaKnown RBP11.83□□□□□ -0.52
CLSTN1-203ENST00000435891 MORC2Q9Y6X9 1032 aaPredicted RBP11.83□□□□□ -0.52
CLSTN1-203ENST00000435891 PHLPP2Q6ZVD8 1323 aa11.83□□□□□ -0.52
CLSTN1-203ENST00000435891 PPP1R3GB7ZBB8 358 aa11.82□□□□□ -0.52
CLSTN1-203ENST00000435891 MCM7P33993 719 aa11.82□□□□□ -0.52
CLSTN1-203ENST00000435891 DHX8Q14562 1220 aaKnown RBP11.82□□□□□ -0.52
CLSTN1-203ENST00000435891 RASGRP4Q8TDF6 673 aa11.82□□□□□ -0.52
CLSTN1-203ENST00000435891 CPLX3Q8WVH0 158 aa11.82□□□□□ -0.52
CLSTN1-203ENST00000435891 NOL10Q9BSC4 688 aaKnown RBP11.82□□□□□ -0.52
CLSTN1-203ENST00000435891 DACH1Q9UI36 760 aa11.82□□□□□ -0.52
CLSTN1-203ENST00000435891 SOWAHDA6NJG2 315 aa11.82□□□□□ -0.52
CLSTN1-203ENST00000435891 HIBADHP31937 336 aaKnown RBP11.82□□□□□ -0.52
CLSTN1-203ENST00000435891 COL5A3P25940 1745 aaPredicted RBP11.82□□□□□ -0.52
CLSTN1-203ENST00000435891 DDAH1O94760 285 aa11.82□□□□□ -0.52
CLSTN1-203ENST00000435891 H2AFXP16104 143 aaPredicted RBP11.82□□□□□ -0.52
CLSTN1-203ENST00000435891 ERCC5P28715 1186 aaPredicted RBP11.82□□□□□ -0.52
CLSTN1-203ENST00000435891 ATP2C1P98194 919 aaPredicted RBP11.82□□□□□ -0.52
CLSTN1-203ENST00000435891 KARSQ15046 597 aaKnown RBP11.82□□□□□ -0.52
CLSTN1-203ENST00000435891 ARHGAP29Q52LW3 1261 aa11.82□□□□□ -0.52
CLSTN1-203ENST00000435891 STAG2Q8N3U4 1231 aa11.82□□□□□ -0.52
CLSTN1-203ENST00000435891 CTCFLQ8NI51 663 aaPredicted RBP11.82□□□□□ -0.52
CLSTN1-203ENST00000435891 GPKOWQ92917 476 aaPredicted RBP eCLIP11.82□□□□□ -0.52
CLSTN1-203ENST00000435891 DYNLL2Q96FJ2 89 aa11.82□□□□□ -0.52
CLSTN1-203ENST00000435891 CARD6Q9BX69 1037 aa11.82□□□□□ -0.52
CLSTN1-203ENST00000435891 MRPL44Q9H9J2 332 aaKnown RBP11.82□□□□□ -0.52
CLSTN1-203ENST00000435891 FAM205AQ6ZU69 1335 aa11.82□□□□□ -0.52
CLSTN1-203ENST00000435891 SYNRGQ9UMZ2 1314 aa11.82□□□□□ -0.52
CLSTN1-203ENST00000435891 AHDC1Q5TGY3 1603 aaPredicted RBP11.81□□□□□ -0.52
CLSTN1-203ENST00000435891 STX10O60499 249 aa11.81□□□□□ -0.52
CLSTN1-203ENST00000435891 SCG2P13521 617 aa11.81□□□□□ -0.52
CLSTN1-203ENST00000435891 HNRNPH2P55795 449 aaKnown RBP11.81□□□□□ -0.52
CLSTN1-203ENST00000435891 E2F4Q16254 413 aa11.81□□□□□ -0.52
CLSTN1-203ENST00000435891 GRIK5Q16478 980 aa11.81□□□□□ -0.52
CLSTN1-203ENST00000435891 TYW1BQ6NUM6 668 aa11.81□□□□□ -0.52
CLSTN1-203ENST00000435891 EP400Q96L91 3159 aa11.81□□□□□ -0.52
CLSTN1-203ENST00000435891 LOC102724159A0A0B4J2E5 919 aa11.81□□□□□ -0.52
CLSTN1-203ENST00000435891 ORC4O43929 436 aa11.81□□□□□ -0.52
CLSTN1-203ENST00000435891 CLCN6P51797 869 aa11.81□□□□□ -0.52
CLSTN1-203ENST00000435891 NLRP5P59047 1200 aa11.81□□□□□ -0.52
CLSTN1-203ENST00000435891 GNG11P61952 73 aa11.81□□□□□ -0.52
CLSTN1-203ENST00000435891 RBL2Q08999 1139 aa11.81□□□□□ -0.52
CLSTN1-203ENST00000435891 PWP2Q15269 919 aaKnown RBP11.81□□□□□ -0.52
CLSTN1-203ENST00000435891 SLC10A5Q5PT55 438 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms