RNA–Protein interactions for RNA: ENST00000435213.6

GARNL3-205, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2 BASIC

Gene GARNL3, Length 3,599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-205ENST00000435213 BRF1Q92994 677 aa8.2□□□□□ -1.1
GARNL3-205ENST00000435213 MCM3P25205 808 aa8.2□□□□□ -1.1
GARNL3-205ENST00000435213 DRP2Q13474 957 aa8.2□□□□□ -1.1
GARNL3-205ENST00000435213 GNPTABQ3T906 1256 aa8.2□□□□□ -1.1
GARNL3-205ENST00000435213 NAA16Q6N069 864 aaPredicted RBP8.2□□□□□ -1.1
GARNL3-205ENST00000435213 DPY19L2Q6NUT2 758 aa8.2□□□□□ -1.1
GARNL3-205ENST00000435213 YTHDF3Q7Z739 585 aaKnown RBP8.2□□□□□ -1.1
GARNL3-205ENST00000435213 TTC30AQ86WT1 665 aa8.2□□□□□ -1.1
GARNL3-205ENST00000435213 CTNNBL1Q8WYA6 563 aaPredicted RBP8.2□□□□□ -1.1
GARNL3-205ENST00000435213 PPP1R13BQ96KQ4 1090 aa8.2□□□□□ -1.1
GARNL3-205ENST00000435213 BPIFA3Q9BQP9 254 aa8.2□□□□□ -1.1
GARNL3-205ENST00000435213 LLPHQ9BRT6 129 aaKnown RBP8.2□□□□□ -1.1
GARNL3-205ENST00000435213 MAGEC2Q9UBF1 373 aaPredicted RBP8.2□□□□□ -1.1
GARNL3-205ENST00000435213 RCOR1Q9UKL0 485 aa8.2□□□□□ -1.1
GARNL3-205ENST00000435213 CTDP1Q9Y5B0 961 aaPredicted RBP8.2□□□□□ -1.1
GARNL3-205ENST00000435213 USP16Q9Y5T5 823 aa8.2□□□□□ -1.1
GARNL3-205ENST00000435213 RFX7Q2KHR2 1363 aa8.19□□□□□ -1.1
GARNL3-205ENST00000435213 H3BQV1 296 aa8.19□□□□□ -1.1
GARNL3-205ENST00000435213 DTNBO60941 627 aa8.19□□□□□ -1.1
GARNL3-205ENST00000435213 LUC7L3O95232 432 aaKnown RBP8.19□□□□□ -1.1
GARNL3-205ENST00000435213 MBD4O95243 580 aa8.19□□□□□ -1.1
GARNL3-205ENST00000435213 MMEP08473 750 aa8.19□□□□□ -1.1
GARNL3-205ENST00000435213 PDE6BP35913 854 aa8.19□□□□□ -1.1
GARNL3-205ENST00000435213 TXLNAP40222 546 aa8.19□□□□□ -1.1
GARNL3-205ENST00000435213 IFFO2Q5TF58 517 aa8.19□□□□□ -1.1
GARNL3-205ENST00000435213 CCAR1Q8IX12 1150 aaKnown RBP8.19□□□□□ -1.1
GARNL3-205ENST00000435213 BCAS4Q8TDM0 211 aa8.19□□□□□ -1.1
GARNL3-205ENST00000435213 CLIC6Q96NY7 704 aa8.19□□□□□ -1.1
GARNL3-205ENST00000435213 CORO1BQ9BR76 489 aa8.19□□□□□ -1.1
GARNL3-205ENST00000435213 LTKP29376 864 aa8.19□□□□□ -1.1
GARNL3-205ENST00000435213 FAM160A1Q05DH4 1040 aa8.19□□□□□ -1.1
GARNL3-205ENST00000435213 WHAMMP3Q1A5X7 153 aa8.19□□□□□ -1.1
GARNL3-205ENST00000435213 USPL1Q5W0Q7 1092 aa8.19□□□□□ -1.1
GARNL3-205ENST00000435213 DDX54Q8TDD1 881 aaKnown RBP8.19□□□□□ -1.1
GARNL3-205ENST00000435213 TBC1D31Q96DN5 1066 aa8.19□□□□□ -1.1
GARNL3-205ENST00000435213 FAM227BQ96M60 508 aa8.19□□□□□ -1.1
GARNL3-205ENST00000435213 TCHPQ9BT92 498 aa8.19□□□□□ -1.1
GARNL3-205ENST00000435213 VCPKMTQ9H867 229 aa8.19□□□□□ -1.1
GARNL3-205ENST00000435213 FBXO9Q9UK97 447 aaPredicted RBP8.19□□□□□ -1.1
GARNL3-205ENST00000435213 TPX2Q9ULW0 747 aaKnown RBP8.19□□□□□ -1.1
GARNL3-205ENST00000435213 N6AMT1Q9Y5N5 214 aa8.19□□□□□ -1.1
GARNL3-205ENST00000435213 ROBO2Q9HCK4 1378 aa8.19□□□□□ -1.1
GARNL3-205ENST00000435213 NCAPD2Q15021 1401 aa8.19□□□□□ -1.1
GARNL3-205ENST00000435213 ALDH1L1O75891 902 aa8.18□□□□□ -1.1
GARNL3-205ENST00000435213 HOXA10P31260 410 aaPredicted RBP8.18□□□□□ -1.1
GARNL3-205ENST00000435213 FAAH2Q6GMR7 532 aa8.18□□□□□ -1.1
GARNL3-205ENST00000435213 LCA5Q86VQ0 697 aa8.18□□□□□ -1.1
GARNL3-205ENST00000435213 SLF2Q8IX21 1173 aa8.18□□□□□ -1.1
GARNL3-205ENST00000435213 PEX5LQ8IYB4 626 aa8.18□□□□□ -1.1
GARNL3-205ENST00000435213 IL17REQ8NFR9 667 aa8.18□□□□□ -1.1
GARNL3-205ENST00000435213 SMARCC2Q8TAQ2 1214 aa8.18□□□□□ -1.1
GARNL3-205ENST00000435213 AATFQ9NY61 560 aaKnown RBP eCLIP8.18□□□□□ -1.1
GARNL3-205ENST00000435213 CEMIPQ8WUJ3 1361 aa8.18□□□□□ -1.1
GARNL3-205ENST00000435213 SHOX2O60902 331 aaPredicted RBP8.18□□□□□ -1.1
GARNL3-205ENST00000435213 AMPHP49418 695 aa8.18□□□□□ -1.1
GARNL3-205ENST00000435213 HDGFP51858 240 aaKnown RBP8.18□□□□□ -1.1
GARNL3-205ENST00000435213 E4F1Q66K89 784 aaPredicted RBP8.18□□□□□ -1.1
GARNL3-205ENST00000435213 NUGGCQ68CJ6 796 aa8.18□□□□□ -1.1
GARNL3-205ENST00000435213 LMOD2Q6P5Q4 547 aa8.18□□□□□ -1.1
GARNL3-205ENST00000435213 AACSQ86V21 672 aa8.18□□□□□ -1.1
GARNL3-205ENST00000435213 ENGASEQ8NFI3 743 aa8.18□□□□□ -1.1
GARNL3-205ENST00000435213 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.18□□□□□ -1.1
GARNL3-205ENST00000435213 ZWILCHQ9H900 591 aa8.18□□□□□ -1.1
GARNL3-205ENST00000435213 ACTR5Q9H9F9 607 aaPredicted RBP8.18□□□□□ -1.1
GARNL3-205ENST00000435213 SLC40A1Q9NP59 571 aa8.18□□□□□ -1.1
GARNL3-205ENST00000435213 GMEB1Q9Y692 573 aa8.18□□□□□ -1.1
GARNL3-205ENST00000435213 RGPD8O14715 1765 aaPredicted RBP8.18□□□□□ -1.1
GARNL3-205ENST00000435213 A0A0D9SFI3 127 aa8.18□□□□□ -1.1
GARNL3-205ENST00000435213 CBFA2T2O43439 604 aa8.18□□□□□ -1.1
GARNL3-205ENST00000435213 PHACTR2O75167 634 aa8.18□□□□□ -1.1
GARNL3-205ENST00000435213 ATP5JP18859 108 aa8.18□□□□□ -1.1
GARNL3-205ENST00000435213 COPB2P35606 906 aa8.18□□□□□ -1.1
GARNL3-205ENST00000435213 ADD1P35611 737 aaKnown RBP8.18□□□□□ -1.1
GARNL3-205ENST00000435213 CATIPQ7Z7H3 387 aa8.18□□□□□ -1.1
GARNL3-205ENST00000435213 AOPEPQ8N6M6 819 aa8.18□□□□□ -1.1
GARNL3-205ENST00000435213 SPIRE2Q8WWL2 714 aa8.18□□□□□ -1.1
GARNL3-205ENST00000435213 KCNN1Q92952 543 aa8.18□□□□□ -1.1
GARNL3-205ENST00000435213 GOLPH3LQ9H4A5 285 aa8.18□□□□□ -1.1
GARNL3-205ENST00000435213 LTN1O94822 1766 aa8.17□□□□□ -1.1
GARNL3-205ENST00000435213 JAK2O60674 1132 aa8.17□□□□□ -1.1
GARNL3-205ENST00000435213 HDAC4P56524 1084 aa8.17□□□□□ -1.1
GARNL3-205ENST00000435213 PIP4K2BP78356 416 aa8.17□□□□□ -1.1
GARNL3-205ENST00000435213 STK3Q13188 491 aa8.17□□□□□ -1.1
GARNL3-205ENST00000435213 CLPPQ16740 277 aaPredicted RBP8.17□□□□□ -1.1
GARNL3-205ENST00000435213 BEND6Q5SZJ8 279 aaPredicted RBP8.17□□□□□ -1.1
GARNL3-205ENST00000435213 SLC35B4Q969S0 331 aa8.17□□□□□ -1.1
GARNL3-205ENST00000435213 MPHOSPH8Q99549 860 aa8.17□□□□□ -1.1
GARNL3-205ENST00000435213 SH3GL1Q99961 368 aa8.17□□□□□ -1.1
GARNL3-205ENST00000435213 MAK16Q9BXY0 300 aaKnown RBP8.17□□□□□ -1.1
GARNL3-205ENST00000435213 HELLSQ9NRZ9 838 aa8.17□□□□□ -1.1
GARNL3-205ENST00000435213 MYO1AQ9UBC5 1043 aa8.17□□□□□ -1.1
GARNL3-205ENST00000435213 TMEM221A6NGB7 291 aa8.17□□□□□ -1.1
GARNL3-205ENST00000435213 BUB1BO60566 1050 aaPredicted RBP8.17□□□□□ -1.1
GARNL3-205ENST00000435213 SFPQP23246 707 aaKnown RBP eCLIP8.17□□□□□ -1.1
GARNL3-205ENST00000435213 NEK2P51955 445 aa8.17□□□□□ -1.1
GARNL3-205ENST00000435213 PPP2R3AQ06190 1150 aa8.17□□□□□ -1.1
GARNL3-205ENST00000435213 MAP7D1Q3KQU3 841 aa8.17□□□□□ -1.1
GARNL3-205ENST00000435213 ANKRD13AQ8IZ07 590 aa8.17□□□□□ -1.1
GARNL3-205ENST00000435213 THEMISQ8N1K5 641 aaPredicted RBP8.17□□□□□ -1.1
GARNL3-205ENST00000435213 FSD1Q9BTV5 496 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms