RNA–Protein interactions for RNA: ENST00000432954.1

CCDC171-202, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-202ENST00000432954 MAP3K14Q99558 947 aa12.16□□□□□ -0.46
CCDC171-202ENST00000432954 CCT7Q99832 543 aa12.16□□□□□ -0.46
CCDC171-202ENST00000432954 CDCA7Q9BWT1 371 aaPredicted RBP12.16□□□□□ -0.46
CCDC171-202ENST00000432954 MOV10L1Q9BXT6 1211 aaKnown RBP12.16□□□□□ -0.46
CCDC171-202ENST00000432954 INIPQ9NRY2 104 aa12.16□□□□□ -0.46
CCDC171-202ENST00000432954 SEPT10Q9P0V9 454 aa12.16□□□□□ -0.46
CCDC171-202ENST00000432954 SYNMO15061 1565 aa12.16□□□□□ -0.46
CCDC171-202ENST00000432954 DISP1Q96F81 1524 aa12.16□□□□□ -0.46
CCDC171-202ENST00000432954 GSDMDP57764 484 aa12.16□□□□□ -0.46
CCDC171-202ENST00000432954 FAM69CQ0P6D2 419 aa12.16□□□□□ -0.46
CCDC171-202ENST00000432954 XRCC4Q13426 336 aa12.16□□□□□ -0.46
CCDC171-202ENST00000432954 RIPK1Q13546 671 aa12.16□□□□□ -0.46
CCDC171-202ENST00000432954 SAFBQ15424 915 aaKnown RBP eCLIP12.16□□□□□ -0.46
CCDC171-202ENST00000432954 CCDC153Q494R4 210 aa12.16□□□□□ -0.46
CCDC171-202ENST00000432954 E4F1Q66K89 784 aaPredicted RBP12.16□□□□□ -0.46
CCDC171-202ENST00000432954 SLC2A7Q6PXP3 512 aa12.16□□□□□ -0.46
CCDC171-202ENST00000432954 ZNF554Q86TJ5 538 aa12.16□□□□□ -0.46
CCDC171-202ENST00000432954 CHAMP1Q96JM3 812 aa12.16□□□□□ -0.46
CCDC171-202ENST00000432954 LNPKQ9C0E8 428 aa12.16□□□□□ -0.46
CCDC171-202ENST00000432954 KIAA1522Q9P206 1035 aaPredicted RBP12.16□□□□□ -0.46
CCDC171-202ENST00000432954 SQORQ9Y6N5 450 aa12.16□□□□□ -0.46
CCDC171-202ENST00000432954 HECW1Q76N89 1606 aa12.16□□□□□ -0.46
CCDC171-202ENST00000432954 PTPN23Q9H3S7 1636 aa12.16□□□□□ -0.46
CCDC171-202ENST00000432954 CCDC162PA2VCL2 907 aa12.15□□□□□ -0.46
CCDC171-202ENST00000432954 SCG2P13521 617 aa12.15□□□□□ -0.46
CCDC171-202ENST00000432954 BMP2KLQ5H9B9 411 aa12.15□□□□□ -0.46
CCDC171-202ENST00000432954 PPFIBP1Q86W92 1011 aa12.15□□□□□ -0.46
CCDC171-202ENST00000432954 STAMBPL1Q96FJ0 436 aa12.15□□□□□ -0.46
CCDC171-202ENST00000432954 GPATCH3Q96I76 525 aa12.15□□□□□ -0.46
CCDC171-202ENST00000432954 OSBPL1AQ9BXW6 950 aa12.15□□□□□ -0.46
CCDC171-202ENST00000432954 DNAJC5Q9H3Z4 198 aa12.15□□□□□ -0.46
CCDC171-202ENST00000432954 OCEL1Q9H607 264 aa12.15□□□□□ -0.46
CCDC171-202ENST00000432954 PIDD1Q9HB75 910 aa12.15□□□□□ -0.46
CCDC171-202ENST00000432954 SUCLA2Q9P2R7 463 aaPredicted RBP12.15□□□□□ -0.46
CCDC171-202ENST00000432954 LUC7L2Q9Y383 392 aaKnown RBP12.15□□□□□ -0.46
CCDC171-202ENST00000432954 DPPA5A6NC42 116 aa12.15□□□□□ -0.47
CCDC171-202ENST00000432954 HIP1RO75146 1068 aa12.15□□□□□ -0.47
CCDC171-202ENST00000432954 ANP32DO95626 131 aa12.15□□□□□ -0.47
CCDC171-202ENST00000432954 ATP6V1G2O95670 118 aa12.15□□□□□ -0.47
CCDC171-202ENST00000432954 SYF2O95926 243 aaKnown RBP12.15□□□□□ -0.47
CCDC171-202ENST00000432954 MRPS35P82673 323 aaKnown RBP12.15□□□□□ -0.47
CCDC171-202ENST00000432954 NEUROD2Q15784 382 aa12.15□□□□□ -0.47
CCDC171-202ENST00000432954 MUM1Q2TAK8 710 aa12.15□□□□□ -0.47
CCDC171-202ENST00000432954 TRIM50Q86XT4 487 aa12.15□□□□□ -0.47
CCDC171-202ENST00000432954 CHCHD4Q8N4Q1 142 aa12.15□□□□□ -0.47
CCDC171-202ENST00000432954 FBXW7Q969H0 707 aa12.15□□□□□ -0.47
CCDC171-202ENST00000432954 DDX27Q96GQ7 796 aaKnown RBP12.15□□□□□ -0.47
CCDC171-202ENST00000432954 JAKMIP1Q96N16 626 aaKnown RBP12.15□□□□□ -0.47
CCDC171-202ENST00000432954 BPIFA3Q9BQP9 254 aa12.15□□□□□ -0.47
CCDC171-202ENST00000432954 EPC1Q9H2F5 836 aa12.15□□□□□ -0.47
CCDC171-202ENST00000432954 NOD2Q9HC29 1040 aa12.15□□□□□ -0.47
CCDC171-202ENST00000432954 NOP53Q9NZM5 478 aaKnown RBP12.15□□□□□ -0.47
CCDC171-202ENST00000432954 ACAD8Q9UKU7 415 aa12.15□□□□□ -0.47
CCDC171-202ENST00000432954 CAMSAP2Q08AD1 1489 aa12.15□□□□□ -0.47
CCDC171-202ENST00000432954 CHL1O00533 1208 aa12.14□□□□□ -0.47
CCDC171-202ENST00000432954 FOXD2O60548 495 aaPredicted RBP12.14□□□□□ -0.47
CCDC171-202ENST00000432954 SUPT3HO75486 399 aa12.14□□□□□ -0.47
CCDC171-202ENST00000432954 BCAR3O75815 825 aa12.14□□□□□ -0.47
CCDC171-202ENST00000432954 CLTAP09496 248 aa12.14□□□□□ -0.47
CCDC171-202ENST00000432954 GNAT2P19087 354 aa12.14□□□□□ -0.47
CCDC171-202ENST00000432954 S100A1P23297 94 aa12.14□□□□□ -0.47
CCDC171-202ENST00000432954 KIF5AQ12840 1032 aa12.14□□□□□ -0.47
CCDC171-202ENST00000432954 BIRC3Q13489 604 aa12.14□□□□□ -0.47
CCDC171-202ENST00000432954 SRGAP1Q7Z6B7 1085 aa12.14□□□□□ -0.47
CCDC171-202ENST00000432954 MPHOSPH8Q99549 860 aa12.14□□□□□ -0.47
CCDC171-202ENST00000432954 VCX3AQ9NNX9 186 aa12.14□□□□□ -0.47
CCDC171-202ENST00000432954 GABBR1Q9UBS5 961 aa12.14□□□□□ -0.47
CCDC171-202ENST00000432954 L3MBTL1Q9Y468 752 aa12.14□□□□□ -0.47
CCDC171-202ENST00000432954 RGL2O15211 777 aa12.13□□□□□ -0.47
CCDC171-202ENST00000432954 POTEIP0CG38 1075 aa12.13□□□□□ -0.47
CCDC171-202ENST00000432954 GEMIN4P57678 1058 aaKnown RBP12.13□□□□□ -0.47
CCDC171-202ENST00000432954 CYP4A11Q02928 519 aa12.13□□□□□ -0.47
CCDC171-202ENST00000432954 GNL2Q13823 731 aaKnown RBP12.13□□□□□ -0.47
CCDC171-202ENST00000432954 BYSLQ13895 437 aaKnown RBP12.13□□□□□ -0.47
CCDC171-202ENST00000432954 DAAM2Q86T65 1068 aa12.13□□□□□ -0.47
CCDC171-202ENST00000432954 GRAMD2AQ8IUY3 354 aa12.13□□□□□ -0.47
CCDC171-202ENST00000432954 NDUFAF2Q8N183 169 aa12.13□□□□□ -0.47
CCDC171-202ENST00000432954 RNF10Q8N5U6 811 aaKnown RBP12.13□□□□□ -0.47
CCDC171-202ENST00000432954 GIPC2Q8TF65 315 aa12.13□□□□□ -0.47
CCDC171-202ENST00000432954 RPGRIP1Q96KN7 1286 aa12.13□□□□□ -0.47
CCDC171-202ENST00000432954 HAUS7Q99871 368 aa12.13□□□□□ -0.47
CCDC171-202ENST00000432954 IP6K2Q9UHH9 426 aa12.13□□□□□ -0.47
CCDC171-202ENST00000432954 NOSIPQ9Y314 301 aaKnown RBP12.13□□□□□ -0.47
CCDC171-202ENST00000432954 TIAM1Q13009 1591 aa12.13□□□□□ -0.47
CCDC171-202ENST00000432954 CYTH3O43739 400 aa12.13□□□□□ -0.47
CCDC171-202ENST00000432954 ST18O60284 1047 aa12.13□□□□□ -0.47
CCDC171-202ENST00000432954 URI1O94763 535 aaPredicted RBP12.13□□□□□ -0.47
CCDC171-202ENST00000432954 PPP2R3AQ06190 1150 aa12.13□□□□□ -0.47
CCDC171-202ENST00000432954 SKIDA1Q1XH10 827 aa12.13□□□□□ -0.47
CCDC171-202ENST00000432954 SLC44A4Q53GD3 710 aa12.13□□□□□ -0.47
CCDC171-202ENST00000432954 ZNF362Q5T0B9 420 aaPredicted RBP12.13□□□□□ -0.47
CCDC171-202ENST00000432954 ZCCHC8Q6NZY4 707 aaKnown RBP12.13□□□□□ -0.47
CCDC171-202ENST00000432954 GIMAP6Q6P9H5 292 aa12.13□□□□□ -0.47
CCDC171-202ENST00000432954 CEP128Q6ZU80 1094 aa12.13□□□□□ -0.47
CCDC171-202ENST00000432954 KRT77Q7Z794 578 aa12.13□□□□□ -0.47
CCDC171-202ENST00000432954 PCGF5Q86SE9 256 aa12.13□□□□□ -0.47
CCDC171-202ENST00000432954 CHD1LQ86WJ1 897 aa12.13□□□□□ -0.47
CCDC171-202ENST00000432954 ZNF713Q8N859 430 aaPredicted RBP12.13□□□□□ -0.47
CCDC171-202ENST00000432954 IGSF22Q8N9C0 903 aa12.13□□□□□ -0.47
CCDC171-202ENST00000432954 CEP295NLQ96MC4 621 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms